Neoarius graeffei (lesser salmon catfish): 132882791
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Entry
132882791 CDS
T10798
Symbol
pcdh18a
Name
(RefSeq) protocadherin-18a isoform X1
KO
K16499
protocadherin delta 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132882791 (pcdh18a)
Cell adhesion molecules [BR:
ngra04515
]
Cadherins
Protocadherins
132882791 (pcdh18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF1687
Motif
Other DBs
NCBI-GeneID:
132882791
NCBI-ProteinID:
XP_060771884
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All DBs
Position
3:complement(39225615..39231168)
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AA seq
1061 aa
AA seq
DB search
MWDFTMRRETMRSACFVLFTLLVSGFGHVVGRTLRYRVHEEQETGTVIGSLMEDAQDVLA
HLPSSVPLRFRAVQRGGASALSVRERDGEISVRGRLDREKLCDRNPNCSVEFDVLTLPTE
HLQLFHVQVEILDVNDHAPRFPRAVIPLEISETAAVGTRVPLDSAADPDVGENALSTYTL
SPSDTFGIDVLTGTNGAKYAELVVLKELDRETRSSYELRLTASDSGSPPRTGTTLLKITV
ADSNDNNPVFTEPSYTIELREDTAPGVLLVDLNATDADEGTNAKIVYSFSSHVSPKVAET
FRIDPDTGRLTLLRKVDFETDDLYDVDVQAQDSGPNSMPAHCKITIKVKDVNDNKPDVSV
SLMGNDEESASVSELTPVDTFVALVRVDDADSGVNGEVVCRLAHEGHFRLQKSHEKNYVI
LTNATLDRETRSEYGLTIIAEDRGTPSLSTVRHFTVRVQDENDNAPHFDKNRYDIFKDEN
NSPGAYLATVHATDPDLASNGQVSYSVLESMVHGSPISTYVTVDPSSGAIYALRTFDYEE
LSHISFMVQASDYGKPSLSSNVTVVLNVLDVNDNRPVIVAPPLRNHTTEFPVSKYSDYGD
LITTITATDRDSGVNGDLSCTIAAGNEAGYFYMDSRTCEIRANVSLRDVPTDHVELIILV
QDHGSEPLETRALLRLVLLENPENLADPLATGGVAKENVLDTSTIIIISLGAICGLLIII
MAALALRCSRDKNDTRSYNCRVAESTYQQRPRKPSRQIHKGEITLVPTVNGALPVHHHSP
TTTVPIHHSHQSLNSIVTVTSNQMPESFVLELTHAPPTVEQVSQLLSLLHQGQYQPRPSF
RGNKHSRSYRYTLPDLDKFSLKDSGRGDSDSDGELGRDSPIDRLLGDGFSELFHIDTHSR
VHSAMKLCTEECRVLGHSDQCWMPSFSSFSTEDERRSFSTFGKDVDEEEEEEDGGEKSLL
SDINSVFHRLVPPSHTEHGDLSEGSGPCCVTNENRKCFLPGNSHFQNSANHTSNSKWLPA
MEEIPENYEEDETESTMGFRKRTEDEFAAEINKLLLDVHQS
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtgggattttactatgagaagagaaacaatgcgtagcgcgtgctttgtgctcttcact
ctcttggtgtctgggtttggtcatgtggtgggaaggacactgaggtaccgcgtgcatgag
gagcaggagacaggcaccgtgatcggatcactgatggaggatgcccaggatgtgctggct
cacctgcccagctcggtgccgttacgtttccgggctgtgcagcgtggcggggcgagcgcc
ttatcggtacgtgagcgtgatggtgagatcagtgtcagaggccgactggatcgggagaag
ttatgcgaccggaacccgaactgctcagtggagtttgatgtgctgaccctgcccactgag
cacctgcagctcttccacgtgcaggtggagatactggatgtgaatgaccatgcgccgcgc
ttcccacgtgctgtcatccctctggagatctcggaaacagccgctgtagggacacgagtc
cctctggatagcgctgcggacccggatgtcggtgagaatgctctgagcacatacactctg
agcccatctgacacctttgggatcgacgtcctgactggaaccaatggtgccaagtacgct
gagctagtggtgctaaaggaactcgatcgtgagacacgctcaagctatgagctacgactt
acagcgtcagatagcgggtcacctcccagaactggaaccacacttctaaagatcacagtc
gccgattcaaacgacaacaatcctgttttcacagagccatcatataccatcgagctccga
gaggacacggcacccggtgtcttgctggtggatctgaacgccacagacgcagatgaaggc
acaaacgccaagatcgtctactcttttagcagtcacgtctctccaaaagtagcagaaaca
tttcggatcgacccagacaccggtcgcctgactctgctcaggaaggtggactttgagaca
gatgatttgtacgatgtagacgtccaggcacaagactcagggccaaactcaatgccagca
cactgcaagatcacaatcaaggtaaaggacgtaaatgacaacaagcctgacgtcagcgtg
agcctgatgggaaacgatgaggaatcagcttctgtctcagaattaacaccggtggacaca
tttgtagcccttgtacgtgtggacgacgcagactcaggtgtgaatggtgaggtcgtgtgc
cggcttgctcacgaaggtcacttccggcttcagaaatcgcatgagaagaactacgtaatc
cttacaaatgccacgctggaccgagagactcgctcggaatatggcctcacaataatcgct
gaggaccgcggaacaccgagcctgtccactgtgagacacttcacggtgcgcgtacaagat
gagaacgataacgcgccccactttgacaagaatcgctacgacatctttaaggatgagaac
aattcccctggcgcttacctcgccacagtacatgccaccgacccggacttagccagtaat
ggtcaggtgagctattctgtcttggagagcatggtacatggaagccccatttctacttat
gtcactgtggatccatcaagcggtgccatttatgccttgcgcaccttcgactatgaggaa
cttagccatattagcttcatggttcaagcaagtgactatggcaagccgtcgctaagcagc
aacgtgactgttgtcttgaatgtcctggatgtgaatgacaatcgcccagtgattgtagcg
cctccgcttcgaaatcacaccactgagttcccagtttccaagtattcggactatggtgat
ctcataaccacaatcacggctacagatcgtgactcaggtgttaatggtgacctctcgtgc
accatcgctgccggaaacgaggctggttacttctacatggatagccgcacatgtgaaatc
cgtgctaacgtgagcttgcgtgacgtgccaacagatcatgttgaactcattatcctggtc
caggatcatggcagtgaacctctggaaaccagggctctgctccgcctggtgctgctcgag
aacccggagaacctagctgatccacttgccacagggggtgtggctaaagagaatgttctt
gacacttccaccatcatcatcatctcgttaggtgccatctgtggtctgctgattatcatc
atggcggcactagcattgcgctgctcacgagacaagaatgatacacgctcgtacaactgc
cgcgtcgcagaatcgacctatcagcagcggccgagaaaaccatcacgccagattcacaaa
ggtgagatcacactcgtaccaactgtgaatggagcacttcctgttcatcatcactcgccg
accaccacggtgccgatccatcacagccaccaatcactgaacagcatcgtcactgtgaca
tccaatcagatgccggaaagcttcgtcctggagctgactcatgccccgcctactgtggag
caagtttcacagctgctctccctactccatcagggtcagtatcagcctcggcccagcttc
agaggaaacaaacactctcgcagctacagatacacacttccagacttggataagttcagt
ctgaaggacagtgggcggggcgacagcgacagcgacggtgagctcggccgtgattcgcca
atcgaccggttgctaggcgatggattcagcgagctcttccacatcgacacacacagcaga
gtccactcagcgatgaagctgtgtacggaggagtgtcgtgttctcggtcactctgatcag
tgctggatgccgtcgttctcgtctttctccactgaagatgagcgccgcagtttctccacc
ttcgggaaagatgttgatgaggaagaggaggaggaggatggaggggaaaagtctctgctc
tccgacatcaactctgtcttccatcgactcgtccctccctctcacaccgagcatggtgac
ctcagtgaaggctctggcccctgctgcgtcaccaatgaaaacaggaagtgctttcttcca
ggaaactcgcacttccagaattcggctaatcacacatcaaattcaaaatggctcccggcg
atggaggaaatcccggaaaactatgaggaggatgagacggagagcacgatgggattccga
aaacgaaccgaggatgaattcgccgctgaaatcaacaaactgctgctggacgtccatcag
agctaa
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integrated database retrieval system
