Neoarius graeffei (lesser salmon catfish): 132882929
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Entry
132882929 CDS
T10798
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132882929 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132882929 (fip1l1a)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132882929 (fip1l1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
132882929
NCBI-ProteinID:
XP_060772017
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Position
3:complement(78483636..78544174)
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AA seq
480 aa
AA seq
DB search
MSTGETEKTTGSASGDDEDWLYGDNDDVDEAAGDDDDKRTETEIFSALVGGDVEGGNGVD
NQDADSDSESDDNLCITIGNIKTGRIQSTSTPVDLKTSDKTTVSGKKVRGLALVAVDSIV
GTPALEVDEELEEKPWRKPGADLSDYFNYGFNEDTWKTYCDKQRKLRMSLQFMTLGSSDK
NMGSHDELVSDCSTRRLTSSIDVIGGQTETIVRVEGRRLNSTDGSNTQVQSSSEQPVDAE
PPSSKLPAFFAPIVPPPPFPLLSISTAPPFIQRPPRPSMIPSMSVPPPGFPFPPEVLPPP
PLTSSSGLSGGSYDGRCAPSYPFAAGVYPHTLGHITPWLGLSDRAKAWKHYSCQDGERER
EKDRAWTRDRERDREPKKGQERERDQENTPSVQSRSSDKGHTSRHREHGDRGRERHREHD
REREDRHRDRRRRDRTERHKSSRSSSSRRRHSSDDGESHRRHSYKRSKRNKDSTDTESTN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggggaaacggagaaaaccacaggctccgctagtggggatgacgaggactgg
ctttatggagacaatgacgatgtggacgaagctgctggtgatgatgacgataaaaggaca
gaaactgaaattttcagtgctttggttggaggagatgtggaaggaggcaatggcgtggat
aatcaggatgcagatagcgactcggaaagcgacgacaacttgtgcattactatcggcaac
atcaaaaccggcaggatccagagcactagcactcccgtcgatctcaagacctcggacaaa
accactgtgtcagggaagaaggtcagaggactggctctggttgcagtggacagcatcgtt
ggcactccagcactggaggtggatgaggaactggaggagaaaccttggagaaaaccagga
gcggacctgtccgactattttaactacggcttcaacgaggacacctggaagacctactgt
gacaaacagaggaaactgcgcatgagcctacagttcatgaccttaggctcgtctgacaaa
aacatgggtagtcacgatgagctcgtctcagattgctccaccaggaggttgacaagctcc
attgatgtaattggaggtcaaacagagaccattgttcgtgtggaagggcgaagactgaac
agcacagatggaagcaacacgcaggtgcagtcctcctctgaacagcctgtggatgctgag
ccaccgtcctctaagctgcctgctttctttgcccccatcgttcctcctccaccttttcct
cttctctccatcagcaccgctcctccttttatacaacgcccaccacgaccgtctatgata
ccgtctatgagtgtcccaccacctggttttccattccctcctgaagttcttcctcctcct
cctttaacatcaagcagtggcctttcaggaggaagctacgatggccgttgtgccccgtca
tacccctttgctgcaggtgtgtatccacatactctagggcacataaccccctggctgggc
ttgagtgaccgtgccaaagcgtggaagcattacagctgccaggacggcgagagagaacgg
gagaaggacagagcgtggacccgggaccgagagcgagaccgggagccaaagaaggggcag
gagagagagcgggatcaggagaacacgccctctgtacagagccgcagcagtgacaaaggg
catacatcacgtcacagggaacatggtgatcgggggagagagagacaccgggaacatgat
agagagagagaagaccggcatcgtgacaggaggcgcagagaccgtactgaacggcacaaa
tcctcacgcagcagtagcagtcggagaagacattccagcgatgatggagagagccacagg
aggcacagttataagcgctccaaacgtaacaaggacagcacagacacagagtccaccaac
tga
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