Neoarius graeffei (lesser salmon catfish): 132882940
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Entry
132882940 CDS
T10798
Symbol
prrx1b
Name
(RefSeq) paired mesoderm homeobox protein 1b isoform X1
KO
K09329
paired mesoderm homeobox protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132882940 (prrx1b)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
132882940 (prrx1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
DUF6210
Motif
Other DBs
NCBI-GeneID:
132882940
NCBI-ProteinID:
XP_060772032
LinkDB
All DBs
Position
3:80241858..80250342
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AA seq
246 aa
AA seq
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MTSSYAHVMDRRAVAVPSRLESPITANVDNLQAKKNFSVSHLLDLEEAGEMVGAQTDESV
AETGRTMLESPGLTSGSDTAQPENEQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTH
YPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQ
PIVPRPAPRPNDYLSWGSATPYSTMATYPPTCANTTSTQGMNMANSIANLRLKAKEYSLN
QVPTVN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagctatgcgcatgtaatggacagacgagccgtggcggtgcccagcagactg
gagagccccatcacagccaacgtagacaacctgcaggccaaaaagaacttctcagtgagt
cacctgttggatctggaagaagcaggggaaatggtgggcgcgcagacggatgagagcgtg
gcggagacgggcaggaccatgctggagtctccgggtctgaccagcggaagcgacacggcg
caaccggagaatgaacagttgaactcagaggaaaagaagaagcgtaagcagaggcggaac
aggaccacgtttaacagcagccaactgcaggcgctggagcgagtgtttgagaggacgcac
taccctgacgcctttgtgcgagaggatctggcccgtagggtcaatctcaccgaggcccga
gtgcaggtctggtttcagaaccgacgagcaaagttccgccgtaacgagcgggccatgttg
gccagtaagaatgcctcgctcctcaaatcctactcaggagatgtaacggcagtggagcag
cccatcgtgcctcgtcctgccccacgtcccaatgactacctatcctggggcagcgccacc
ccttacagcacaatggcaacctacccacccacttgtgccaacaccacttccacccaggga
atgaacatggccaacagcattgcgaacctaagactaaaagccaaggagtacagcctcaac
caggtccccactgttaactga
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