Neoarius graeffei (lesser salmon catfish): 132882977
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Entry
132882977 CDS
T10798
Symbol
six4b
Name
(RefSeq) homeobox protein SIX4b
KO
K15615
homeobox protein SIX4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132882977 (six4b)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
132882977 (six4b)
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Ortholog
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GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
132882977
NCBI-ProteinID:
XP_060772076
LinkDB
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Position
3:95003171..95010472
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AA seq
616 aa
AA seq
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MSSSSSEVIGADEIKRESSRALDTRGSAKLAALDPAGLPMENSGSAAVAVECAPASLAFS
PEQVACVCEALLQGGNVERLARFLWSLPQSELLRGNESILKAQAIVAFHQARYQELYCIL
ENHNFSPCNHSSLQDMWYKARYTEAEKARGRPLGAVDKYRLRRKYPLPRTIWDGEETVYC
FKERSRNALKDMYKRNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSEAQSKSE
SDGNHSTEDESSKGQEELSPRPLSSGSAGSVALGTSPAVAYSDGATTVIQQIGDAKMSPL
AAGMGFNGDLTNTNSHYLNGGAYVQSHGSNSLLNGLGTTSGHFLTFDPQRVSHAQERLMG
GSSVSYASYSMGAPEPTVGKLDGMQPLVSHSEHGAVPSVVTFASTTSSSSSPSGAPHLNS
YSMVNLPGVENNLSLPPLLLPPSSTAPSHAGTAPLDGVVSDSSQHSGQPLLYTLNQAVKQ
EPLDIGVAYTYPSSVPLDQSGNLGYTASLFLSTNLSNSPNNGGPLAPAATAAITSVLSST
EGHSGLTHTARGLQETGGALPSDYRAQEAQLPLSDNLETPAGTGEGPPGVCGDLDMEGKE
LAKLQTVQMDEDSNDL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcctcgagtgaagtgattggtgccgatgagatcaagagggagagctcgagg
gcactggacactcgggggagtgccaagctggccgcgctcgatccggccggattgcccatg
gagaactctggctcggctgcggtggcagttgaatgcgcaccggcttctcttgcgttctca
ccggaacaagtggcgtgtgtgtgcgaggcactgctgcagggcggcaatgtggagcgcctt
gcccggttcttatggtcgctcccgcagagcgagctgctgcgcggcaacgagagcatcctt
aaggcgcaggccatcgttgcgttccatcaggcgcgctaccaggagctctactgcatctta
gagaaccataacttcagcccgtgcaaccactcgtctctgcaggacatgtggtacaaagcg
cgatacaccgaggcagagaaggcacgcggcaggccactgggcgccgtggacaaataccgg
ctgcgcaggaagtatccactgccccgcaccatctgggacggagaagagaccgtgtactgc
ttcaaggagaggtcgaggaacgcgctcaaggacatgtacaagcgcaaccgctacccgtct
ccggcagagaagcggaacctcgccaaaatcacaggactttctttgacgcaggttagcaac
tggttcaaaaacagaagacagcgagaccggaacccgtccgaagctcagtccaaaagtgaa
tctgatggcaatcatagtacagaggatgagtcaagtaaaggacaggaagagctttctcct
cgtcctctctctagtggctctgctggttcagttgcccttggcactagccctgctgtagca
tactccgatggtgccaccactgtcatccagcagatcggggatgccaaaatgtctccactt
gccgcaggaatgggtttcaatggagacctgacaaacaccaactctcactatcttaatggt
ggagcatatgttcaatcacatggcagcaacagtcttctgaatggacttggaaccacaagt
ggtcacttcttgaccttcgatccccagagggtctcccatgctcaagagaggctaatgggt
ggctcctcggtgtcttatgcctcttattcaatgggggctccagaacccacagttggaaaa
ctagatggtatgcagcctctggtttcacattcagaacatggagcagtgccttcagttgtc
acctttgcctccaccacatcctcttcctcctctccctctggagctcctcatctcaacagc
tacagcatggtcaaccttcctggggttgagaacaatctgagtcttcctcctttattgcta
ccaccatcttctacagcaccctctcacgcaggcacagctccactggacggggtggtcagc
gactcatcccagcactctggccaacccctgctctacacgctcaaccaggccgtaaagcag
gagcctttggacattggagtggcctacacatacccctccagtgtgcccctagaccaaagt
ggcaacttgggctacacagcatccctctttctctccaccaacctcagcaactcacccaac
aacggaggccccctggcccctgcagccacagctgctatcacctctgtgctctccagcaca
gagggtcactctggtctgactcacaccgcccgcggcctccaggaaactgggggagctctg
ccctcagactacagggcacaggaagcacagctgcccctgtccgacaatctcgagacccct
gcaggtactggcgagggccctcctggagtgtgtggtgatctggacatggagggaaaagag
ctggccaagctgcagactgttcagatggacgaggacagcaatgacctctga
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