Neoarius graeffei (lesser salmon catfish): 132883027
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Entry
132883027 CDS
T10798
Symbol
sox11b
Name
(RefSeq) transcription factor SOX-11b
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132883027 (sox11b)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132883027 (sox11b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
NOA36
DUF2457
Nop14
RNA_pol_3_Rpc31
FYDLN_acid
RXT2_N
CDC45
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
132883027
NCBI-ProteinID:
XP_060772133
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All DBs
Position
3:complement(115196047..115198383)
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AA seq
405 aa
AA seq
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MVQQSETESGASREATDTEEPEMSVCSPVPPKPDWCRTATGHIKRPMNAFMVWSKIERRK
IMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLQHMADYPDYKYRPKKKPKL
DNSSKPGALSPEKSGNKAVKAGAKKCAKMKASKPASVVGASARAAQDVRCSYAFANFKVG
KSVKRELTDDEDEDDDEEEEDDDDDDDDDDDDDYDVESPMRFKAEDDEEHLRPYGVAKVP
ASPTLSSAAESEGASMYEEMSGRASATAGSRLFYSFKNITKQQPLHHHHHHHHHHHASRS
SSSSSSSSSSSALSPAPSFRSASMSSEDADDLLVDFSLNLAAGGEQTSHASGNLCLSLVD
KDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtccagcaaagtgagacggagagcggcgcgtcccgtgaggctacagacaccgaggaa
ccggagatgagcgtctgcagccccgtgcctccaaaaccggactggtgccggacagccacc
ggacacatcaagcggcccatgaacgcgttcatggtgtggtcgaagatcgagcggaggaag
atcatggagcagtcaccggacatgcacaacgcggagatctccaaaagactcggcaagcgc
tggaaaatgctgaaggacagcgagaagatcccgttcatccgggaagccgagcggctgcgc
ctgcagcacatggctgattatccagactacaagtacagaccgaagaagaaacccaaactg
gacaactcttccaaaccgggcgcgctgtcaccggagaaaagcggcaacaaggctgtcaaa
gccggcgcaaagaaatgcgcaaagatgaaagccagcaaaccggcgagcgtcgtcggcgcg
agcgcgcgcgcagcgcaagatgtgcggtgcagctatgcgttcgcgaacttcaaagtcggc
aagtcggtcaagagggagcttacggacgacgaagacgaggatgatgatgaagaagaagaa
gacgacgacgacgacgatgatgatgatgacgacgatgactatgatgtcgagtccccgatg
cgctttaaagctgaggatgatgaggagcacctgagaccgtacggtgtagccaaagtgccg
gcgagtcccacgctgagctcagccgccgagtcggaaggcgcaagcatgtatgaggagatg
tccgggcgcgcaagcgcaacagccggttccagactgttttacagcttcaagaacatcacc
aagcagcagccgctgcaccaccatcaccaccaccaccaccatcaccatgcgagccgatct
tcttcatcatcatcatcatcatcatcatcatctgcactgtctccggctccgtctttccgt
tccgcgtccatgtcgtctgaggacgcggacgacctgctggtcgacttcagcttgaacttg
gcagcaggcggcgagcagaccagccacgcttcagggaacttgtgcctgtctctggtggat
aaggacttggactcgttcagcgagggcagcctcggctcccacttcgagttcccggactac
tgtactccagagctgagtgagatgatcgcaggagattggctcgaggccaatttctccgac
ttggtgttcacctactaa
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