Neoarius graeffei (lesser salmon catfish): 132883126
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Entry
132883126 CDS
T10798
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
132883126 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132883126 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ngra03310
]
132883126 (esr1)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
132883126 (esr1)
Nuclear receptors [BR:
ngra03310
]
3. Estrogen like
3A. Estrogen receptor
132883126 (esr1)
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Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
Rhomboid_N
RXLR_WY
Motif
Other DBs
NCBI-GeneID:
132883126
NCBI-ProteinID:
XP_060772331
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Position
3:8353783..8431889
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AA seq
629 aa
AA seq
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MSGEQARVEAPAGARQRRRSELEGYSATLASLKLSPMYPEEEQRTAGGMSSTVHYLDGTF
DYTTTTTAATTNTNPDASNSSVDYYSAAPDLQVAPEPQDENLQPLANGSTSPLVFVPSSP
QVSLFLGHPPPGQHTAQQVPYYLESSGTSIYRSSIFASAGSRVELCSATGRQDVYTAVGA
SGPSGTSGTSGSIGLVKEIRYCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYVCPA
TNQCTIDRNRRKSCQACRLRKCYEVGMMKGGFRKERGGRIMKHNRRHSGLKERERGYSEA
QSGSDAREAPPQDEQSSSGTAGGVAGVVCMAPEQLLLLLLRAEPPTLCSRQKHSRPYSEL
TMMSLLTNMADRELVHMIAWAKKVPGFQNLSLHDQVQLLESSWLEILMIGLIWRSIHSPG
KLIFAQDLILDRSEGECVEGMAEIFDMLLATVARFRALKLKSEEFVCLKAIILLNSGVFS
FCSSPVEPLRDGFMVQCMMDNITDALIHYISQSGISVQLQSRRQAQLLLLLSHIRHMSYK
GMEHLYSMKCKNKVPLYDLLLEMLDAHRLRPLSKVPRNWADRVSSLPTTITTTTTTNTTT
HHHNHHSCVSVCPADEQSNPPHPDQRPSP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagagcaggctcgtgttgaagctccggctggtgccaggcagcgacgcaggagt
gagctagaggggtattcagctactctcgcttccctcaagctctcacccatgtacccggag
gaggagcagcgcacagcgggaggcatgtcctccaccgttcactacctagacgggacgttc
gactacaccaccactaccaccgccgccaccaccaacaccaaccccgatgcctcaaactca
tcagtggactactactcagcggccccagatcttcaagttgccccagagcctcaggatgaa
aacctgcagcccctggctaacggctccaccagccccctggtgttcgttccttcgagcccg
caagtctcgctgttcctcggccatcctcctccaggacagcacacggctcaacaggtcccg
tactacctggaatcatcaggaacctccatttacaggtccagtatctttgccagtgcaggg
tcacgagtggagctttgtagcgccaccggcaggcaggatgtctacactgcagtgggggcc
tcgggaccgtcagggacttcggggacttcaggatcaatcggattggtgaaggagatccga
tactgcgcagtgtgcagtgattatgcctcaggataccactatggagtctggtcctgtgag
ggctgtaaggccttcttcaagcgcagtatacagggtcacaatgattacgtgtgtccagca
accaaccagtgcaccatcgacaggaatcgcaggaagagctgccaagcatgtcgcctacgt
aaatgctacgaagtaggcatgatgaaaggaggttttcgtaaggagcgtggcggtcgcatc
atgaagcacaacagaaggcacagtgggctgaaggagcgggagcgaggttatagtgaagcc
cagagtggttctgatgcgagagaagcacctccacaggatgagcagagcagctcagggacc
gcgggcggggtagcgggcgtggtgtgcatggctccggaacaactgttgctgctgttgttg
agggcggagccgcccactctgtgctcgcggcagaaacacagccgaccctatagcgagctc
accatgatgagtctgctcaccaacatggccgacagggagctcgttcacatgatcgcctgg
gccaagaaagtgcctgggttccagaatctctctctgcatgaccaggtgcagcttttggaa
agctcctggctggagattttgatgattggtctcatctggaggtccatccactcacctgga
aaactcatctttgcacaggacctcatccttgacaggagtgaaggagagtgtgtggagggc
atggctgagatatttgatatgcttctggccaccgtggcccgtttccgcgccctcaaactc
aagtccgaggagttcgtgtgtctcaaagccatcatactgctgaactcgggtgtgttttcg
ttctgctcctcccccgtcgaacccctgagggatggcttcatggtgcagtgcatgatggat
aacatcacggatgccctcatacactacatcagccaatcaggaatctcggtgcagctccag
tcccggcgtcaagcccagctcctgcttttgctctcgcacatcagacacatgagctataaa
gggatggagcacctctacagcatgaagtgcaagaacaaagttcctttgtatgatctgctg
ttggagatgttggatgcacataggcttcgccctctgagcaaagtgccaaggaactgggct
gacagagtgtcgtctttacctactacaatcaccaccaccacaactaccaacaccaccacc
caccaccacaatcaccatagctgcgtctctgtatgtcctgcagacgaacagtccaacccg
ccgcatcctgaccaaagaccaagcccatga
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