Neoarius graeffei (lesser salmon catfish): 132883158
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Entry
132883158 CDS
T10798
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132883158 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngra01009
]
132883158 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132883158 (pcdh7b)
Protein phosphatases and associated proteins [BR:
ngra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132883158 (pcdh7b)
Cell adhesion molecules [BR:
ngra04515
]
Cadherins
Protocadherins
132883158 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
LYRIC
MLANA
Motif
Other DBs
NCBI-GeneID:
132883158
NCBI-ProteinID:
XP_060772443
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All DBs
Position
1:67236336..67482393
Genome browser
AA seq
1247 aa
AA seq
DB search
MRNIGTTDCLCYCFLLLQLLTQPAAKQVLRYRLAEEGPADVRVGNVAADLGIVAGSGDVT
FTLESGSEYFKIDNITGELSTNERRIDREKLQQCLMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
SGESSVRRIGSGGSSNVDSHMGKRRFDDGASRSSVFELQVADTTDGEKQPQLIIKGALDR
EQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPIL
QLKAMDADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMAR
DRGQPPKTDKATMIINIKDENDNVPNIDIRKIGRIYLRDGVANVAEDVVVDTPIALVQVS
DRDKGQNGVVTCTVVGDVPFQLKPASEIEGEMNKKKYFLHTSAPLDYEAVQEYNVVIVAV
DSGSPSLSANNSLIVKVGDMNDNPPIFSKSTMEVSFPENNSPGERVLTVVALDADSGKNA
EISYSLDSSVNGIFSIDPDSGDIRVNTILDREQTERYEFKVIAKDKGVPVLQGSATVVVL
VADRNDNEPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGHNAEMSLYIEEEEEIFSIE
NNTGTIFSTVAFDREQKTTYSFRVKAVDGGEPSRSATATVSLFVMDENDNPPTVTFPLNS
SYTLLPPSSNLRTVVRTVIATDTDTGVNADLSFSIVGGNPFKLFEIDHATGVILLISKLE
QKHYGLHRLVVQVNDSGVPSQSTTTLVHVYVNETLSNSTIVEAKIAKSLGTPLNADIAGD
PNYELGKQRLSIAIGVVSGIMTVILIILIVVMARYCRPKNKNGYEAGKKDHEDFFTPQQH
DKNKKPKKDKNKRKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPG
SPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISIGSDHCSEYS
SQTLNKYNKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLDESETPSSKSSTGPRLGALPL
PEDAYERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDACWMPVRTSPERR
PKATPPKLSTFNSSSAGCSGVEQATSSDPLAVANGEPSHLLGDRNRNLLNKKMASSSSSS
SAYDAFSSAAFSASEETSRPVEEIPLAPTGEYKPTQCGTLTRREVYL
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatataggcacgacggactgcctctgctactgctttctgctgctgcagctgctg
actcagcccgcggccaagcaagtgctgcgctaccgtctggctgaggaaggtcccgccgat
gtgcgcgtggggaacgtggctgccgaccttggcatcgttgccggctccggggatgtgact
ttcaccctcgagtctggctctgagtatttcaagatcgacaacattaccggcgaattgagc
accaatgagcggcgcattgaccgcgagaagctgcagcagtgcctgatgatattcgacgag
aatgagtgctttatagacttcgaggtgtccgtgatcgggcccgcgcaaagctgggtagac
ctgttcgagggcaaggtcataattttggacataaacgacaacacgccgtctttcccgtcg
cctgtgctcactctctccgtggaggaaaacaggccgatcggcacgctttacctcttgccc
acggccactgacagggatttcgggagaaacggtatagagaggtacgagttgattcaggac
agtggagaaagctccgtgcgacggataggctccggaggctcttctaatgtcgactctcat
atgggtaaaagaagatttgatgacggcgcgagtaggagtagcgtgtttgaacttcaagtc
gctgatactacagacggagaaaaacaaccgcagctgattattaaaggcgcactggacaga
gagcagcgcgactcctatgagctgactctacgcgtcagggacggcggcgaccccccgcga
tcctctcaagccatcctcagagtgatgattacagatgtgaatgacaacagcccgcgtttt
gagaagagcgtgtatgaggcagacctacccgagaacagctcccctggcgctcccatcctc
cagcttaaggcaatggatgctgatgttggggttaatggacagattgaatacgttttcggg
gcagccactgaatcagtgcggcgactgctgcggttagacgagagcacaggctggcttagt
gtattgcataggattgatcgtgaggaagtgagtcaactgcggttcacagtcatggcccgt
gaccgtggtcagcctcccaagacagacaaggcaacaatgattattaatatcaaggatgaa
aacgacaatgtcccaaatatcgatataagaaaaattggacgcatttacctgagagatggt
gtggcaaatgtagcagaagacgtagtagtagacacacctattgcactggtgcaagtgtct
gatcgtgacaagggacagaacggtgtagtgacatgcactgtggttggtgatgtgcccttc
cagctgaagcctgcaagtgagatagagggtgaaatgaacaaaaagaaatatttcctgcac
acatcagcgccgcttgactatgaagctgtgcaggagtacaacgtcgtcatcgttgctgtg
gattcaggcagtcccagtttatctgcaaacaactcattaatcgtgaaagttggggacatg
aatgacaatccacctatatttagcaaaagcacaatggaggtctcatttccagaaaacaat
tctcctggtgaacgtgtactgactgtagtggccttggatgcagacagtggtaaaaatgca
gaaatctcatactcactggattcctctgtgaatggaatattttccattgatccagacagt
ggtgacattcgtgtgaacacaatacttgatagagagcaaacagagcggtatgagttcaaa
gtaatcgccaaagacaaaggtgtgcctgttttacagggttcagctacagtggtggtacta
gtggcagacaggaatgacaatgaaccaaagtttatgcaggatgtttttactttctatgta
aaggagaacctgcaacccaatagccccgtaggcatggtaacagtaatggatgcagacaag
ggacataatgctgagatgagcctatacattgaggaagaggaagaaattttctccattgag
aacaacacgggaaccattttttctactgtagcgtttgatcgtgaacagaaaaccacctac
tcattccgtgttaaggctgttgatggtggggaaccatctcgatcagccacggccacagtc
tctctttttgtcatggatgaaaatgataatccaccaacagtcacttttcctcttaacagc
tcctatactctgttacctccatccagcaatttgagaacagttgtccggacagtcatagct
actgatactgacacaggtgtcaatgctgacctcagcttcagcatagtcggaggcaatccc
ttcaagttatttgagattgaccatgccactggcgttattttattaattagcaagttagaa
cagaaacactacggccttcaccgcctggtagtgcaagttaatgacagtggggttccctca
cagagcaccaccacactagtgcatgtctatgtcaatgaaacactctccaattccaccata
gttgaagccaaaattgccaagagccttggtacaccccttaatgctgacattgctggagac
cccaattatgagctgggcaagcagcgtttaagcattgctatcggagtggtgtctggcatc
atgactgtcatcctcatcatcctcattgtggtcatggcccgctactgtaggcccaagaac
aagaacgggtatgaggctggtaaaaaagaccatgaggacttctttaccccgcagcagcat
gacaagaacaagaaacccaaaaaagacaagaacaaaaggaagtctaagcagcctctgtac
agcagtattgtcacagtagaggcatcaaagcctaatggacagcgctatgatggtgtcaat
gagaaactctctgacagccctggaatggggcgttatcgctctgttaatggtgggccagga
agcccagaccttgcccgtcactacaagtccagctcacctctacctactgttcagcttcat
ccacagtcacccacagcagggaaaaaacaccaggctgttcaggatctgcccccggccaac
accttcgtggggaccggagataacatatccattggatctgatcactgctctgagtacagc
agccaaaccctgaacaagtacaacaagcagccattccgccgagtgacgttctcggtggtg
agccagccccaggaccctcaccagggctctctgcagagctgctacgacagcggccttgac
gagtcggagacgccgagcagcaagagctccacaggcccccggcttggagccctccccctc
cctgaggatgcctatgagaggaccacgccggatggcagtgtcggtgaggcagagcatatg
gaaaatgactctcggcccctgccggatgtagccatgacggggaagtgtacgcgtgagtgt
gacgagtatggccactcagacgcttgctggatgccagtgcgcacttcacccgagcgcagg
cccaaggccacccctcccaaactctccaccttcaactcgagctcagccgggtgcagcggc
gttgaacaagccacaagctccgatccacttgctgtggccaatggagagccctcgcacctg
ctcggagaccgcaaccgcaatctcctcaacaagaaaatggcctcctcctcttcctcctct
tcggcctacgatgctttcagctcggccgccttctctgctagtgaagaaacgtctcggcct
gttgaagaaattccactggcacccacaggtgaatataaacccactcaatgtgggacgctc
accagacgtgaggtttacctgtga
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