Neoarius graeffei (lesser salmon catfish): 132883185
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Entry
132883185 CDS
T10798
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Enzymes [BR:
ngra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
132883185 (tarbp1)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
132883185 (tarbp1)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132883185 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132883185
NCBI-ProteinID:
XP_060772468
LinkDB
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Position
3:21727578..21851701
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AA seq
1607 aa
AA seq
DB search
MSTFLMKVLVSQCCDIERTLDMLCWPSSSLPEVERVEALGLFMGELALKSQSGTEVFNGF
KSRERFVCKVQSIIWDHCVPLLKMISSENVPSREGSATQSAQRKEMLHATCALLMTCLRE
CQTDSLEKIACLVLPALLERGDRHGDTEQLDTDVAIEVLAVLLSGVSSNTALTKKALSCT
LCSVKELSDIWVSKIILRIWFTCLNSSNKEIQADILCYLWEDLLDWYEQKGTEAVTARLL
LCLTALSDFLFSLDQRGPNPEMSHTFFRVVQAGLVHKDGVSRKRALYLLNRCVSLAEARN
ADINMCDTEDFFFKWTAEQRLVLQEFWEAYALVLETLEEYQLHVIRPVLSRIDMLVKTIS
TDIQGSGLIHPSWLLCIYQRMFHSENKVVIKEGITHLLGLQMLQHPAFAFAFSQFVVGPF
MDVLAETSLYHRSPKQTVGECPELVVKLQNFMVMFFSSLPQDRQGSVLLQMLKHLSSRRW
CSVPLLFLSQTLSCLPPCPLLKVDGLHILRELLGCTMVTHHILLRGAIQCFLLHAVLQLS
DVSVMCLDEVFAFLAHFRAEESLCPGTTIWEKLCDWLLANEGNFWSAATSTSVSPQKVSV
HSYHSLKAFLTIPASSDQADRIPVVGEAELLARTLFLSADLDWRRREKQGLEDRRLEQLF
FPLLDILHRLNTSVYVPVCKSDKSLQLMLRLLLLLGKTLETERENEDKMAVALTQLLLGV
VEPVQEFILRRLSGELQELSDIGRANLYLSLLRELIKTYSKVPGYSFNLQKNYVSRLTIG
CVRLLNEPSEQNPSIAGQVQKAISMATLALLCELADQCLFESQSEAMRSLCSLTAYFCPS
SSSSSTPQIFNQTLLKPCSTADISSCSYSDPLLRDWNRVVAYFIRDQWTCLSFLQKFAET
PRTTEAFQAAIEALSLLPSDLVLPVLDFMCAALPQVLHKEALCVEAVSVSWTLVHALSTN
AHDFWPVLQAFVRLAFHRSFLELQDVQSHKITPCIQQVTRELIELSQAKLGVFNVLIQHC
CNTWLPSDPDNHTNTGFQSALNHLDILTEACIYGPIYRRDQSCCSCRLLQEVQTYVERLG
EELAANVLINSSNRDDQFPRLCVLAFLSHLEPSNSLHQRLMEMLVQCLLKKDKEISKSKV
RYYSNSMQHRVKNRVWQTLLLLLPKLRPEFVVEYMFGLVCEAGFSNNQPSVKYLIEWALI
LILHQNPSHIQRLWVCFNVDQEKTKTSICTFLSVLVHLGILLPKLEDKTRQWRKAIEVIL
LWCFSHNFTVRLYALLALKRVWSLKGAQVLAENEECSSTSLQGLATVVEACLHQAEVMQN
TGNAVKNWSRIQEHFFFSAFHPLNDYSVETIFHTFPILSELAEDECIPVWKFEKLVDFQH
SSAVPLKNTGRELWKLQPSDWVQQDRGELEQEERWADVQKKIAPWSLNVQEVEQHLVAQQ
RVARLGKPTSALLVVASLIDKPTNLGGLCRTCEIFGASALVLGSLHHVVDKQFQALSVSS
ELWLPLMEVKPMDLAGFLQLKQREGYCIIGVEQTVNSQSLQSYRFPEKTLLLLGNEREGI
PADLLQLLDVCVEIPQQGVTRSLNVHVSAALLVWEYTRQHLGPDQSS
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttttctgatgaaggttttggtgtcgcagtgctgtgatatcgagcgcacgttg
gacatgttgtgctggccgagttcttcgttgcctgaagtagagagagttgaagcccttggc
ttatttatgggcgaacttgccctcaaatcgcagtccggcacagaggtttttaacgggttt
aaatccagggaacgttttgtttgtaaagtgcagtcaataatatgggaccattgcgtgcca
cttttgaaaatgatttcaagtgaaaatgttccatctcgggagggaagtgctacacaaagt
gctcagaggaaggagatgctccatgccacttgtgctcttctgatgacatgtctgagggag
tgtcagactgactccctggagaaaatagcatgtttggttttacctgcgttgttagaaagg
ggtgacagacatggtgatacagagcagctggatactgatgtggccatagaggttctggca
gtattgctctcaggtgtttcttccaatacagccttaactaagaaagcactgtcctgtacc
ctttgtagtgttaaggagctttcggacatttgggtctccaaaataattcttcgtatctgg
ttcacctgtcttaactcatcaaacaaagaaatacaagcagacattctgtgctacctttgg
gaggatttactggattggtatgagcagaagggcacagaagcggtgacagcacgccttctg
ctatgtcttaccgctctttctgacttcctcttctcattggatcagagggggcccaaccca
gaaatgtcacacactttcttcagagtggtccaagctggacttgtacacaaggatggtgtg
tcccgtaagagggcactctatctgctaaatagatgtgtctcactggcagaggcacgcaat
gcagatattaatatgtgtgatacagaagatttttttttcaaatggacagcagagcaaaga
ttagtacttcaggagttttgggaagcgtatgccctggtcctggaaactcttgaggaatac
cagctccatgttattcgaccagtgctaagccgaattgacatgcttgtcaaaacaatttca
acagatattcaaggcagtggactgattcatccatcgtggttactgtgcatttatcagcgc
atgttccacagtgaaaacaaggttgtgataaaggagggcatcactcatctgttggggcta
caaatgcttcagcatcctgcttttgcctttgctttctcccagtttgttgtaggtcccttc
atggatgtcctagctgaaacctcgctgtaccacaggtctcctaaacaaaccgttggagaa
tgtccagaactagttgtgaaattgcagaatttcatggtgatgttcttcagcagtttgcct
caggacagacaaggatcagtgctactgcagatgctcaaacatttgagctctcgacggtgg
tgttctgtccctctgttattcctttctcaaaccctgtcctgcttgccaccctgcccactt
ctgaaagtagatgggctacatatactcagagagctgcttggctgcactatggtcacccac
cacattctactaagaggggccatccagtgctttctgcttcatgctgttctccaactgtct
gatgtgtcagtgatgtgtctggatgaagtatttgcttttctagcacatttccgagctgag
gagtccctgtgtccagggacaacaatttgggaaaagctttgtgattggttgctagctaac
gagggcaatttttggtctgctgcaacttccaccagtgtttccccacagaaagtctcagtg
cacagctaccactctttaaaagccttcctgaccataccagctagctcagatcaagcagac
aggatacctgtagtaggcgaggctgaactactagctcgcaccctcttcctctctgcagac
ctggactggaggagaagagagaagcagggtctcgaggacagaagactggaacaacttttc
ttccctctgcttgatatcctccaccggctcaacaccagtgtttatgtgccagtgtgcaag
agtgataagagtctccagctcatgttaagacttctactgcttcttggcaaaactttagag
actgaaagggagaatgaagataagatggcagttgccttgacacagctgctgttgggtgtg
gtagaaccagttcaggagttcattctaagaaggctgagtggagaactacaggagttgtct
gatataggcagagcaaatctgtatttgtctcttctgcgggagctgataaaaacttacagc
aaagtcccaggctacagctttaacttgcagaaaaactatgtgtcaagactcactatcggc
tgtgtgagactactcaatgagccatctgaacagaatccatctattgctggacaggtgcaa
aaagcaattagcatggcaacattagccttgctatgtgagctggctgaccagtgtttgttt
gaatcccagtctgaggctatgagatccctgtgctccctcactgcttatttctgtccatcc
tcatcctcttcatccacacctcagatctttaaccagaccttactgaagccttgttctaca
gcagacatctccagctgttcgtatagtgacccgcttctgagagactggaatagagtggtg
gcttacttcatcagagaccagtggacatgcctcagttttcttcagaagtttgctgagacc
cccagaactacagaggcctttcaagctgctatcgaggctctttccttgctaccaagcgat
ttggtgctgcctgtactagactttatgtgtgcagctttaccacaggtcctacataaggag
gccttatgtgttgaagcagtatctgtgtcctggacgctggtacatgccttgagtacaaat
gctcatgacttctggcctgtcctgcaggcctttgtacgcttggccttccaccggagcttc
cttgagctgcaggatgttcaaagccacaagataactccctgcatccaacaggttacacgt
gagctgattgagctctcccaggctaagttgggagtttttaatgtgctgattcagcactgc
tgcaacacctggcttccgtctgaccccgacaatcatacaaacactggtttccaaagtgcc
ttaaaccacttggacatactgactgaagcttgcatctatgggccaatctacagaagagat
caaagttgttgttcttgtagactccttcaggaggttcaaacttatgtagagcgtcttggg
gaagaacttgcagcaaatgtgttgattaacagctcaaatagggatgatcagttcccacgc
ttgtgtgttttggcctttctgagtcatcttgaaccatccaatagtctacatcagaggctg
atggaaatgctagtgcagtgcttactgaaaaaggataaggagatatcaaagtcaaaagtg
cgttattattctaactctatgcaacacagagtaaagaatagggtgtggcaaacattgctg
ctcctcctgcccaagctgaggccggagtttgttgtggagtacatgtttggcctagtgtgt
gaggcaggctttagcaacaaccagccttctgtcaagtacctgattgagtgggccctgatt
ctgatcctccaccagaacccctctcatattcagcgtctgtgggtttgcttcaatgtggat
caagagaaaacaaagacaagcatctgcacgttcctttctgtgttggtgcacctgggaatc
ctgctccctaaactagaggacaagacaaggcaatggcggaaagctatagaggtgattttg
ctgtggtgtttcagtcataacttcactgtccgtctgtatgcattgctggccctgaaaaga
gtgtggagtttaaaaggggcacaagtcctggctgaaaatgaagagtgcagttcgacctct
ctgcagggactagcaacagttgttgaggcctgcttacatcaagctgaggtcatgcagaat
actggcaatgccgtaaagaactggtccagaatacaggagcattttttcttcagtgccttt
catcctcttaatgattacagtgtagagacaattttccacacattccctattctgtcagaa
ttggcagaggatgagtgcattccagtctggaagtttgagaagctggtggactttcaacac
agttctgctgtacctttgaagaacacaggcagagagctttggaagctgcagcctagtgac
tgggttcagcaagatagaggtgagctggaacaagaagagcgctgggcagatgtacagaaa
aagattgctccttggagtctgaatgtgcaagaggtggagcaacaccttgtggcccagcag
agagtagcacgtctgggtaaacctacatctgccctcctggtggtcgcctcacttattgac
aagcccacaaacctgggtggtctttgtcgaacttgtgaaatctttggagccagtgctctg
gtgctgggtagcctacatcatgtcgttgacaaacagttccaagccctgagtgtctcttct
gagctgtggcttcctctgatggaggtgaagcccatggacctggcaggttttctgcagctg
aagcaaagagagggttactgtatcattggtgtagaacaaacagtcaacagccagagtttg
caaagctataggtttccagagaagaccctactactgttagggaatgaacgagagggtatt
cctgctgacctcctgcagttgttggatgtatgtgtggagattcctcagcaaggagtgacg
cgttctctcaacgtgcatgtgagcgctgccctactggtgtgggaatacaccagacagcac
ttgggtcctgatcaatcctcttaa
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integrated database retrieval system
