Neoarius graeffei (lesser salmon catfish): 132883194
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Entry
132883194 CDS
T10798
Symbol
pds5a
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132883194 (pds5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132883194 (pds5a)
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132883194 (pds5a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
132883194 (pds5a)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
132883194 (pds5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
EnP1_C
PI-TkoII_IV
DUF7946
Motif
Other DBs
NCBI-GeneID:
132883194
NCBI-ProteinID:
XP_060772492
LinkDB
All DBs
Position
3:22504650..22667357
Genome browser
AA seq
1323 aa
AA seq
DB search
MEFPQQQKAPADGKIVYPLGVKEITDKISNDEVVKRLKLVVKTYMDMDQDSEEEKQQYLA
LALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLE
DTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHML
DLMSSIIMEGDGVTQELLDTILINLIPAHKNLNKQAYDLAKMLLKRTVQTIETCIASFFN
QVLVMGKSSVSDLSEHVFDLIQELFAIDPLLLVSVMPQLEFKLKSNDGEERLAVVKLLAK
LFGAKDSELATQNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLAKDLTEYLKVR
SHDPEEAIRHDVIVTIINAGKKDLNLVNDQLLGFVRERMLDKRWRVRKEAMMGLAQLYKK
YCLHHEAGKESAQKISWIKDKLLHIYYQNSIDDKLLVEKIFAQFMVPHSLETEEKMKCLY
YLYACLDANAVKALNEMWKCQNMLRGLVRELLDLHKLPMSEANTTAMFGKLMTIAKNLPD
PGKAQDFMKKFNQVLGEDEKLRLQLEQLISPTCSCKQAEQCVREITRKLTYPKQPTNPFL
EMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDEDEGVTPDTAIRAGLELLKVLSF
THPTSFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGQKIESELPQIRSTLIPILHQKA
KRGTPHQAKQAVHCIHAIFHNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAP
DQFASPMKSIVANFIVKDLLMNDRSVGSKNGRLWTTDDEVSPEVLAKVQAIKLLVRWLLG
MKNNQSKSANSTLRLLSAMLVSEGDLTEQKKICKSDMSRLRLAAGSAILKLAQEPCYHDI
ITPEQFQLCGLVINDECYQVRQIFAQKLHMALVKLLLPLEYMAVFALCAKDPVKERRAHA
RQCLLKNISVRREYIKQNPMAQEKLLSLLPEYVVPYMIHLLAHDPDFTKPQDFEQLRDIK
ECLWFMLEVLMTKNENNSHSFLRKMVENIKQTKDAQAPDDPKANEKLYIVCDVALFVITN
KSTSCHLDSPKEPVLPVKFFTPPDKDFINDKDYLSAEARNVLLTGKIQQQPKQTGVLGAV
NKPLVVTTVRRPYTKSTVSNSGSNASTNSQPVSPATPKNKDTSSNASEAGARENEENPQI
VKADGGKKEEATSPAQVSGRKRTTPATDGTENSVASNPVAASQPPPNKPRRGRPPKNPAA
AANKEKEVTTTPGSGAGRGRKRAAPSQDSTSTASAEPISVKIPKQKESDSKRAGQQRQID
LQR
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggagtttccgcaacagcagaaagcgccggccgacggcaagatcgtttacccgctcgga
gtgaaggagatcacggacaaaatcagcaacgatgaagtggtcaaacggttaaagttggtg
gtgaagacgtatatggatatggatcaggactccgaggaggagaagcagcagtacctggct
cttgcactacacctggcctcagagttcttcctgcggaaccctaataaagatgttcggctg
ctcgtggcctgctgcctcgcagatatcttcaggatctatgcccctgaagccccttacacc
tctcacgataaactcaaggaaatttttctgttcatcacacgtcagctgaagggtttggag
gacacaaagagtccccagttcaacagatatttctacctactggagaatctggcttgggtg
aagtcgtataatatatgcttcgagctggaggactgtaatgaaatttttattcagcttttc
aaaactctcttctccgttatcaataacagccataaccagaaggttcagatgcacatgctt
gacctgatgagctccatcataatggagggtgatggagtaacccaagagctgctggacacc
attctcattaacctcatccctgcacacaagaacctgaataaacaagcatatgacttggcc
aagatgttgctcaagaggactgtgcagaccattgaaacgtgcattgcctcattctttaat
caggtgttggtgatgggcaagtcctctgtgagtgatctgtcagagcatgtgtttgacctc
atacaagagctgttcgccatcgacccgctgttgctcgtgtccgtcatgccacagcttgag
tttaagttgaagagcaatgatggagaagagcgattagctgttgtaaagctgttggctaaa
ctcttcggtgcaaaagattcagaactggccacccaaaaccgcccactctggcagtgcttt
ctgggaaggtttaatgatatccatgtgcctgtgagactggagtgtgtgaagtttgccagc
cactgcctcatgaaccatccagacttggctaaggaccttacagagtacttgaaggtaagg
tcacatgaccctgaagaggcaatccgccatgatgtcattgtgacgatcatcaatgctggg
aagaaggacctgaacctggtgaacgaccagctgctgggctttgtccgagagagaatgttg
gacaaaaggtggcgtgttcgtaaggaggcgatgatgggtttggcacagctatataagaag
tactgcttacaccacgaggctggcaaagaatcggctcagaaaatcagctggatcaaagat
aaactgctgcatatatactaccagaacagcattgacgacaagttgctggtggaaaagatc
tttgcacagtttatggttcctcacagtttggagaccgaggagaagatgaagtgcttgtat
tacctttacgcctgtttggacgctaatgccgtcaaggctctaaatgagatgtggaagtgt
cagaacatgctgagagggcttgtgagggaacttctggacctgcataagctgcccatgtct
gaagcaaacacaacagccatgtttggaaagctcatgaccatcgccaagaatctgcctgac
ccagggaaagctcaggacttcatgaagaagtttaatcaggttttgggtgaagatgagaag
ctgcggctgcagctggagcagctcatcagcccgacctgctcctgcaaacaggccgagcag
tgtgtgagagagataacgcgcaagctgacgtaccccaagcaacctaccaaccccttcctg
gagatggttaagtttctgctggagaggattgcaccagtgcacattgattcggaggccatc
agtgccctggtgaagcttttgaataagtccattgaaggcactgctgatgatgaagatgag
ggagttactcctgacactgccatccgtgctggactagaactactcaaagttttgtctttc
acccacccaacgtcattccactctgctgagacgtacgagtctcttctgcagtgtctcaaa
atggaggatgataaagtggcagaggcggccattcagatcttcagaaacaccggccagaag
attgagagcgagttgccgcagatcagatcgactcttattcccatacttcaccaaaaagcc
aagagagggaccccacaccaagccaaacaggcagtgcactgcatccacgccatcttccac
aacaaagaagtccagctggctcaaatatttgagccattgtctcgtagtctgaacgctgat
gtcccagagcagctaatcactcctctcgtctctttgggtcacatctccatgctggccccg
gatcagtttgcttcacctatgaagtccattgtagccaacttcattgtaaaagatctgctg
atgaatgacagatctgtgggcagtaagaacggtagactgtggacaactgatgacgaagtt
tcccctgaagtgttggcaaaggttcaagccattaagctgctggtgagatggttgttgggg
atgaagaataatcagtctaaatcagccaactccactctcagactgctctcggcaatgctg
gtcagcgagggggacctaacggaacagaaaaagatctgtaagtcagatatgtctcggcta
agactggcagcaggcagtgccattttgaaactggcacaggaaccctgctaccacgacatc
atcacaccagaacagttccagctctgcggactggtcattaatgacgagtgttaccaagtc
cgtcagatctttgctcagaagctccacatggctctggtgaagttgctgttgcccctggag
tatatggctgtttttgctctgtgcgctaaagacccagttaaagagagacgtgcccatgcc
agacagtgcctactgaaaaacattagcgtccgtagggaatacatcaaacagaatcccatg
gcccaggagaagctcttgtcccttttgccagagtatgtggtgccgtatatgatccatttg
ctggcacacgacccggactttacaaagccacaggactttgaacagctcagagacatcaaa
gagtgcttgtggttcatgttggaggtgctgatgacgaagaatgagaataacagtcactcg
ttcctaagaaagatggtggaaaacatcaagcagacaaaagacgctcaagcacctgatgat
ccaaaggccaacgagaaactgtacatcgtttgtgatgtggcactgttcgtcatcacaaat
aaaagtacttcctgtcatttggactcgccgaaagagcctgtgctgcccgttaagttcttc
actccacccgataaggacttcatcaacgacaaggactatctgtctgctgaggccagaaat
gtcctgctcactggaaaaattcagcaacagccgaagcagacgggagtgttgggagcagtg
aacaagcctttagtggttacgacagtacgcagaccttatactaaatccacagtttccaac
agcggaagcaatgccagcacaaactcccagcctgtttctccggcaactccgaagaacaag
gacacgagttctaatgcatcagaagcaggagcaagagagaacgaagagaatccacagatc
gtcaaagcggatggtggaaagaaggaggaagcaacatcaccggctcaggtgagcgggaga
aagcggaccactccagcgactgacggaacggagaacagcgtggcctcaaaccccgttgca
gcatcacagcctcctcctaacaaacctcgccgaggcagaccccctaaaaacccggcagcg
gcagccaacaaagagaaagaggtcacaaccacacctgggagtggagctggtcggggcaga
aagagagcagcaccctcccaggattccacctcgacagcctcagctgaaccaatcagtgtc
aagataccaaaacagaaagaatcggattccaagcgggcaggacaacagaggcagatcgac
ctgcaaaggtaa
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integrated database retrieval system
