Neoarius graeffei (lesser salmon catfish): 132883213
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Entry
132883213 CDS
T10798
Symbol
kitb
Name
(RefSeq) KIT proto-oncogene, receptor tyrosine kinase b
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04010
MAPK signaling pathway
ngra04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132883213 (kitb)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
132883213 (kitb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ngra01001
]
132883213 (kitb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ngra04090
]
132883213 (kitb)
Enzymes [BR:
ngra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
132883213 (kitb)
Protein kinases [BR:
ngra01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
132883213 (kitb)
CD molecules [BR:
ngra04090
]
Proteins
132883213 (kitb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
Ig_6
Ig_4
VEGFR1-3_N_Ig-like
C2-set_2
Motif
Other DBs
NCBI-GeneID:
132883213
NCBI-ProteinID:
XP_060772548
LinkDB
All DBs
Position
3:complement(25784598..25835655)
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AA seq
963 aa
AA seq
DB search
MMARAWILFPVTLLLTFPTGFFKPVITPDVPHLVILKGGQLELRCEDNTRLGANTLRWHR
DKGRRVEGEQEEDGATVINLTSVQPQHMGRYTCKSTQTGETSSIYIYVKDLESAFVRSMV
NGLLAREGEDCTLPCLVTDPAVTRLSLLTCSGTAVPAGLSFTADPQKGIIIHNITKAFDG
CYVCTGLMGGTTVKSSQYDVNVRQVPGSVPVISLSKSESVILMKGEALELICSTSNINHD
IHLMWSYPSGANALESHASHILPGSWGYKRSSTLWISSAGTNDSGIYICQAQNEKGVSNA
TVHLDVYEHGFINITEGENRAMDVREGESLTLRVEMTSYPKPNAAYWTYNNQQLKNTSEH
VITLHNQQYRYISELKLVRVHGSEGGIYTFSASHDYASVNNSFFVHVNCKPMIVSQEGPI
DGQVKCVASGYPAPKISWYYCEPRHTRCSQLMNATQEDEDAAIVSLSVSKFGRTKVESRL
NITKGKYHTLECVATTQGEQAYTLFSISERTVPHKLFTPLLTGVVTASVLLMLFLIILLY
KYMQKPKYEIHWKVIDSIHGNNYTYIDPTQLPYDPKWEFPRERLRFGKILGAGAFGKVVA
ATAYGLSSPDTVTTVAVKMLKPSAHSTEKEALMSELKVLSYLGNHMNIVNLLGACTIGGP
TLVITEYCCYGDLLNFLRRKREEFFSLKTGDGYYKNLLSQTQSSREGAENGYMPMRSHQK
KSKQTEWSDDKDDLSIDTEDLLSFSYQVAKGMDFLTSKNCIHRDLAARNILLTKGRVAKI
CDFGLARDITKDSNYVLRGNARLPVKWMSPESLFSCVYTFESDVWSYGILLWEIFSLGNS
PYPGVPVGSMFYKMIQDGYRMSEPEFAPSEIYEVMRWCWSSDPLKRPTFRKLVERTEMLL
SEATKHVYLNLSENGGRSISESFDCPGPQRAASQRLSSVGSTTASTQPLLLATNDVFLEH
ETC
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgatggcacgcgcttggattctcttcccagtgacacttttattgactttcccaacaggc
ttcttcaagccagttatcactcccgatgttcctcacctggtcattctaaagggtgggcaa
ctagagctgcgctgtgaagacaacacaaggcttggtgccaacacattgcgatggcaccgg
gataaaggcagaagggttgagggagaacaagaggaagatggagcaactgttatcaacctc
acctctgtccagccgcaacacatgggccgctatacctgcaagagcactcaaacaggagaa
acgagctccatctacatttatgtgaaagatctggagagcgcatttgtgcgctccatggtg
aacggcttgctagcgagagagggcgaagactgcactttgccgtgcttagtgaccgatcca
gccgtgactcgtttgtctctactgacctgtagtggcaccgctgtgccagctggcctttcg
ttcacggctgacccacagaaaggcatcatcatccataacatcaccaaggcgttcgacgga
tgctatgtttgcactggtctcatgggcggaacgacggtgaaatcaagccagtatgatgtg
aacgtgagacaagttccaggctctgtaccagtaataagtctatccaaatcagaaagtgtg
atattgatgaagggcgaagcgctcgagctcatctgcagcacctctaacatcaaccatgac
atccatttgatgtggagctacccttcaggagcgaatgcactggagtcacatgcctctcac
atcctgcctggttcctggggctacaagcgatcatccaccctctggattagctctgccggg
acgaacgactctggaatttatatctgccaagcccagaatgagaagggtgtctccaatgcc
accgttcaccttgatgtttacgagcatggattcattaacataactgaaggagagaacaga
gccatggacgtgcgagagggagagagtctgacactgcgagtagagatgacctcatacccc
aagccaaatgctgcatactggacttataacaaccaacagctcaaaaacacctctgagcac
gttatcacactacataaccagcaatataggtacatcagtgagctgaagttggtccgtgtt
catggctccgaaggcggcatctacactttctcagccagtcacgattatgcgtctgtcaat
aactcattcttcgtccatgtcaattgtaagccgatgattgtttctcaggaggggccgatc
gatggacaggtgaaatgtgttgcatcaggataccctgctccaaaaatatcctggtactat
tgtgaaccacgacacacacgatgttctcagctgatgaacgccacacaggaagacgaggac
gcagctatagtgagtttgtctgtgtcaaagtttggccgcaccaaggtagagagccgcctc
aacatcaccaagggaaaataccacaccctggagtgtgtagcaactacacagggagaacag
gcgtatacactcttctccatcagcgagcgcacagttcctcataaactcttcaccccgcta
ctgactggagtcgtcacagcttctgtactgctcatgttgtttctaatcatactcctctac
aagtacatgcagaaacctaagtacgagatccactggaaggtgattgacagtatccatggc
aacaactatacctatatcgaccccacccagctgccttatgatcccaagtgggaatttcca
cgagagaggctgcgttttggtaaaatccttggtgctggagcatttggtaaagtggtggca
gctacagcatatggtcttagctcacctgacacggtcactactgttgctgtaaagatgctc
aagccaagcgctcactccactgaaaaggaagctctgatgtcagagctgaaggttctgagt
taccttggcaaccacatgaatattgtcaacctgcttggtgcctgtactataggaggcccg
actctggtgatcacagagtactgctgttatggtgacctgctgaattttctgagaagaaag
agggaggagtttttcagcttgaaaacaggagatggatattataaaaaccttctaagtcag
acacaatcttcaagggaaggcgcagaaaacggctacatgcctatgagatcccatcagaag
aagtctaaacaaacagaatggagcgatgataaggatgacttatctattgatactgaggat
ttgctcagcttctcctaccaagtcgccaaaggcatggacttcctcacatccaaaaattgt
atccatagagatctggcagcaagaaatattttactgaccaagggtcgggttgccaagatc
tgtgacttcggcctggctcgtgacatcaccaaggactccaactatgttttgaggggaaat
gcacgtcttccagtcaaatggatgtctcctgagagcctgttttcatgcgtctatacgttc
gaaagtgatgtttggtcctatggcatcttactgtgggagattttctctctaggtaacagc
ccatatcctggagttccagttggttccatgttctacaagatgatacaggatgggtacagg
atgagtgagccggaatttgctccaagtgaaatttatgaggtgatgagatggtgctggagc
tctgatcctctgaagagaccaaccttccggaaattggtagagaggactgaaatgttgctc
tctgaagccaccaaacatgtgtacttgaatctcagtgagaacggaggcagaagtatcagc
gagtcattcgattgtccaggcccgcagagagcagcgtctcagaggctgagctcagtgggc
agcaccacagcatcgactcagcctcttctactggccaccaatgatgtttttctggagcat
gagacttgctaa
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