Neoarius graeffei (lesser salmon catfish): 132883313
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Entry
132883313 CDS
T10798
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132883313 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132883313 (fip1l1b)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132883313 (fip1l1b)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
132883313
NCBI-ProteinID:
XP_060772750
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Position
3:complement(36799313..36822727)
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AA seq
568 aa
AA seq
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MSAEEAEKTTTTTTPPAAPVIPAAEAPAGDEEEEWLYGDEGETKETEEEEVKQTGTVSTP
AAPAAPEENSTGNGVASQEEEQGDNEDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGTAP
VNLNIKTGGSRPYGAVGAKVKGVDLDAPGGINGVPVLEVDMESFEEKPWRKPGADLSDYF
NYGFNEETWKAYCEKQKRLRMGLDAINISSATSKISVQQGRTGNDKEAALPAHVAKADFT
SPSNLYKTNLNPARISPPQWAGPASQDTPYYTKSTGTIDVIGGQTATISRVEGRRRHNLE
GNNIQVISEHTSSEAEATPAKLPTFFPPGPLPPNMPPPPFLPPPPVSQAPPLIPPPRLPI
TVPPPGFPPPPSGPPPSLMPTLDNTGHSGGYDCRPVTPYPFPPGGYPPPIQGPVNNWAGV
MDNSKQWDYYSRREKEREREKERERERERTRDRGHDRERERDREHSPSSMAYNSDEERYR
YRDYGERGYERHRDRSSREKEERHRERRHREKEEGRHKSSRSSSRRRHDSEEGDSHRRHK
HKKSKRSKEGKEPSEERAADQENQEAME
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggaagaagcggagaaaacaacaacaacaacaacaccaccagcagcgccagta
atcccggcggcggaggctcctgctggggatgaggaggaggaatggctgtacggcgatgaa
ggagaaaccaaggagactgaggaggaagaggtgaaacagactggcaccgtcagcaccccc
gccgcacctgcagctcctgaggagaacagcactggaaacggagtggccagtcaggaggag
gagcagggtgacaacgaggacagcgacagtgacagcgatgacgacgacgacgatgtccgt
gttaccatcggcgacattaagacgggtgcgcctcagtacacgacgtacggaacagcgccg
gtcaacctgaacataaagacaggcggcagcaggccatacggagcagtgggagcgaaggtg
aagggtgtggatcttgatgccccaggcggcatcaacggcgtccccgtattggaggtggac
atggagtcctttgaagaaaagccgtggagaaaacctggtgccgacttgtcggactacttt
aattacggctttaatgaggaaacttggaaggcgtactgtgagaagcagaagcggctgcgg
atgggcctcgacgccatcaacatcagctctgctacaagcaagatatctgttcagcagggc
aggacagggaacgataaggaggctgcacttcctgctcacgttgctaaagcagactttacg
tccccatctaacctgtacaagacaaacctgaacccagccaggatatcccctccgcagtgg
gcggggcctgcatcccaagatacgccctattatacgaagtctactgggaccattgatgtg
attggtggacaaacagcgaccatcagcagggtggagggacgccgccgacacaatctggag
ggaaacaacatccaggtgatctctgaacacacgtcctccgaagcagaggccacacctgcc
aaacttcccaccttcttccccccagggcccctccctcccaacatgccaccaccgcctttc
ctgcctccaccccctgtcagccaggctccaccccttatccctccgccaagactcccgatc
accgtccctcctcctggtttcccacctcctcccagtggcccgcccccttcactcatgcca
acattagacaacactgggcattctggaggatatgactgccgtcctgtcacgccatatcct
ttcccaccaggcggttacccgccgcccatacaggggcctgtgaacaactgggctggggtg
atggacaactcgaagcagtgggattattattcccgccgagagaaggagagggagagagag
aaggagagagagagggaaagagagaggacgagagaccgtggacatgaccgggagagagag
cgagatcgagagcatagtccctcatccatggcctacaacagtgatgaggagcgttaccgt
tatcgtgactacggagaacgtgggtacgaaaggcatcgggaccggtcgagccgagagaag
gaggagagacatcgtgaaaggagacaccgagagaaagaggaaggaaggcacaagtcctca
cgcagcagtagcagaaggaggcatgacagtgaggaaggtgacagccatcgcagacacaaa
cataagaagtcgaagaggagtaaagagggcaaagagccgagcgaggagcgagcagccgac
caggagaaccaggaggctatggagtaa
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