Neoarius graeffei (lesser salmon catfish): 132883352
Help
Entry
132883352 CDS
T10798
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04517
IgSF CAM signaling
ngra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132883352
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132883352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ngra04812
]
132883352
Cytoskeleton proteins [BR:
ngra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
132883352
Intermediate filaments
Intermediate filament-binding proteins
132883352
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CENP-K
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
132883352
NCBI-ProteinID:
XP_060772848
LinkDB
All DBs
Position
3:complement(44360316..44563166)
Genome browser
AA seq
2352 aa
AA seq
DB search
MELQRATSMPGPLSPGPLSPGRVSPGHLSPEHLSPGPGPSYQGSGPGPSYGAAAFNYNQL
EGRFKQLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLP
KPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQD
ISVETEDSKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLID
FDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMK
ALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQL
QAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYIPREGKLISDINKGWERLEK
AEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAAT
KKHEAIETDIAAYEERVQVVVAVASELETENYHDIKRITVRKDNVLRLWDYLLELLRARR
QRLELNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQA
DRVKSVNANAQKFADDSEGYKPCDPQVIRDRVAHMEFCYQELTQLAAERCARLEESRRLW
KFFWEMAEEEGWIREKEQILSSDDCGKDLTGALRLLSKHKAFEDEKSGRAGHLQQTVHQG
EELVAAGHFGADKISQRIADVQGQWVALEQLSAARKVRLQEACALHQFQADADDMDAWML
DALRIVSSTDVGHDEFSAQALVKKHKDVAEEIASYRPVLDALHEQTKALPEEQARLADAS
GRLSGIEERYKEVVELTRLRKQALQDALALYKMLSEADACELWIDEKEQWLNGMEIPEKL
EDLEVIQHRFESLEPEINSQASRVAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQYR
DLVDRKKDALNSALGVQNYYLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGM
ERDLVAIEDKLGDLGKEADRLAEEHPDQAPGIKGHLGEIKDVWEEMKGTMHAREESLGEA
SKLQQFLRELDDFQVWLSRTQTAVASEDMPNTLTEAEKLLAQHEGIKNEIRNYKDDYQKM
RDMGETVTRGQTDAQYMFLSQRLQALDTGWNELQKMWENRQKHLSQSHAYQLFLRDTKQA
EAFLNNQEYVLAHTEMPATLEGAEGAIKKQEDFMTTMDANEEKINGVVETGRRLVSDGNI
SAERIQEKVMSIEERHKKNREAASELLTKLKDNRDLQRFLQDCQELSLWISEKMLTAQDM
SYDEARNLHSKWLKHQAFMAELQSNKEWLEKIQKDGTALVAEKPETEVVVKEKLESLKKT
WDELESTTQTKAQCLFDANKAELFTQSCADLDKWLSGLEGQIQSDDFGKDLTSVNILLKK
QQMLESQVEVRQKEVEELRTQAQALSQEGKGSDEVDGLRCGVEKKFHELQEPLKKRRSNL
MASREIHQFNRDVEDEILWVEERMPMATSTEHGNNLQTVQLLIKKNQTLQKEIQGHQPRY
DDIFERSTHILKENSPVSATIRQRLDELKRLWRLIQEEVEKRHRRLEEAHKAQQYYFDAA
EAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSQTSRALVAAG
HPESERISMRQSQVDKLYAGLKDLSEERRGKLDERSCLFQLNREVDDLEQWIAEREVVAG
SHELGQDYEHVTMLQERFREFARDTGNIGQERADAVNKMADELINSGHADAATIAEWKDG
LNEAWADLLELIDTRTQILAASYELHKFYHDAKEVLGRILDKNKKLPEELGRDQNTVEAL
QRMHTTFEHDIQALGTQVKQLQEDAARLQSAYAGDKAEDIQRREAEVLEAWRSLLEACDG
RRVRLIDTNDKFRFFSMVRDLLLWMEDVIRLIDAQEKPRDVSSVELLMNNHQGIKAEIDA
RNDSFTSCVELGKTLLSRKHYASEEIKERLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQF
SRDAGVAEAWLLGQEPYLSSREVGQSVDEVEKLIKRHEAFEKSAATWEERFAALERLTTM
ELLEVRRQQEEEERKRQAQPVEAPPTETASPQQRESEQVSQNGPPPEQDSPREDTGGSDV
VNGVAESSPGSSPTGSRKRKPGQAATLPTKSQDTAAPQIEGFLNRKHEWEGHNKKASNRS
WHNVYCVINNQELGFYKDSKSASQGIPYHGEVPISLKESTCEVALDYKKKKHVFKLKISN
GNEYLFQAKDDEEMNSWIQAISCKTPSEISSHSTPASARTQTLPTSGSMGAESSPGKKEK
DKEKRFSLFKKK
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcaaagggctaccagcatgcccggacccctgtccccaggacctttatctcct
ggacgcgtttctcctgggcatctctcccctgagcacctgtctccagggccaggaccatca
taccaaggctccggtcctggacccagttacggcgcagctgcttttaactataaccagctg
gagggtcgatttaagcagctgcaagatgagcgcgaagctgtgcagaagaagacctttacc
aaatgggtgaactcgcacctggcccgagtctcctgccgcatcacagacctctacatggat
ctgagggatggccgcatgctcattaagctcctggaggtgctgtctggagagagactgccg
aagcccacaaaaggccgtatgagaattcactgtctggagaacgtggacaaagctctgcag
ttcctcaaagaacagcgtgttcacctcgagaacatgggctctcatgacattgttgatggc
aaccaccgcctcacactgggcctcatctggaccatcattctgcgcttccagattcaggac
attagcgtggagacggaagacagcaaggaaaagaagtctgccaaggatgcactgcttctc
tggtgtcagatgaagactgcaggttatccaaatgtcaacattcacaatttcaccacgagc
tggagagacggcatggccttcaacgcccttattcacaagcacaggcctgacctgatagac
tttgacaagctgaagaaatccaatgcccactataatttgcagaatgcctttaacctggct
gaacagcacttgggcctcacaaagctgctagaccctgaagatatcagcgttgaccatcct
gatgaaaagtcaatcatcacctatgttgtcacttactatcactacttctccaagatgaag
gccctgaaagtggaaggcaaacgtattggaaaggtgctagataacgctatcgagaccgag
aagatgattgagaagtacgaatccctggcctcggacctgctggagtggattgaacagacc
atcattatcctcaataatcgcaagtttgccaactctctggttggagtgcagcagcagctt
caggcctttaacacctacagaacagtggagaaacctcctaagtttacagaaaaaggcaac
ctggaggtcctgctgttcaccattcagagcaaaatgcgcgccaacaatcagaaagtctac
atacctcgagagggaaaactcatatccgacatcaacaagggatgggagaggttggagaag
gcagagcatgagcgggaactggctctgaggacggagctgattcgccaggagaagttggag
cagctcgcccgccggttcgaccgcaaggcagcgatgagggagacctggctcagcgagaac
cagagacttgtctctcaggacaactttggttttgatctgcaagccgtggaggcggccacc
aagaagcacgaagccatcgagacggatatcgctgcgtacgaggagcgtgtgcaggtggta
gtggctgtagcctccgagctggagaccgagaactaccatgacatcaaacgcatcacggtc
cgcaaagacaatgttctgcggctgtgggactacctcttggagctcctgagagctcgacgc
caaagactggaactcaacctgggcctgcagagagtcttccaggagatgctctacatcatg
gactggatggatgagatgaagatgctgttgttgtctcaggactatggaaaacatctgctt
ggtgttgaggacctgctacagaaacacgctctggtggaggcagacattgccatacaggct
gaccgtgtcaaatccgtcaacgccaacgctcagaagtttgctgacgattctgaaggctat
aagccttgtgacccacaggtgatccgtgaccgtgtggcccacatggagttctgctaccag
gagctgacacagctggcagcagagcggtgcgcgcgtcttgaagagtcacgtcgcctctgg
aaatttttctgggagatggctgaggaggaaggctggatccgtgagaaggagcagattctg
tcatccgatgactgtggaaaggacctgacaggggcactgcgcctgcttagcaagcacaag
gcctttgaagatgagaagagcgggcgcgccggacacctccagcagaccgtgcaccagggc
gaggagctggtagcagctggccacttcggtgcagacaagatcagtcagcgtatcgctgat
gtccagggacagtgggtggcactggagcagctgtcagcagcacgcaaggtccggcttcag
gaggcctgtgccctgcaccagttccaggctgacgcggatgacatggacgcctggatgctg
gacgcgctgcgcatcgtgtccagcactgacgtggggcatgacgagttctcggcacaggca
ttagttaagaagcacaaggacgtagccgaagagattgctagctatagaccagtgctggat
gcccttcatgagcagaccaaagcgctacctgaagaacaggcacgcttagcagatgccagt
ggacgtctatcaggcatcgaggaacgatataaggaggtggttgaactgaccaggctgaga
aagcaggcactgcaggacgcactggcattgtacaagatgttgagcgaggcagatgcctgt
gagttgtggatcgacgaaaaggagcaatggttgaatggaatggaaatcccagagaaactg
gaggatttggaggtgattcagcacagatttgagagtctggagccagagattaacagccag
gcttctcgggtggctgtagtgaaccagattgcccgccagcttatccacagtgggcacccg
agtgagaaagagatcaaagcccagcaggacaagctcaacaccaggtggagccagtatcgt
gatctggtagatcggaagaaggatgctctgaactcagctctgggagtgcaaaactactac
cttgaatgcaatgagaccaaatcctggattcgcgaaaagaccaaggtgatcgagtccaca
caggatctgggcaacgatctggctggcgtcatggcacttcagcgcaagctgactggcatg
gagcgagacctagttgctatcgaggataaactgggtgatctggggaaggaagctgaccga
ttggccgaagagcatccagaccaggctcctggcatcaagggccatttgggggagatcaaa
gacgtgtgggaggagatgaagggaaccatgcatgctcgagaagagtccctgggtgaagcc
agcaagctccagcagttcctcagggagctggatgacttccaggtgtggctgtcacgtacc
cagactgctgtggcttcagaggacatgcccaacactctgaccgaggctgaaaagcttttg
gcgcagcatgagggaatcaaaaacgagattcgtaactacaaggacgactaccagaagatg
cgcgacatgggcgagaccgtgacccggggccagacggatgcccagtacatgttcctgagt
cagaggctgcaagcgctggatactggctggaacgagctccagaagatgtgggagaacaga
cagaaacatctgtcgcagtctcatgcctaccagctcttcctccgggataccaagcaggcc
gaggctttcttgaacaatcaggaatatgtattggcccacacggagatgccagctaccctt
gaaggagcagaaggggccatcaagaagcaggaggacttcatgactactatggacgccaac
gaggaaaagattaatggcgtggtggagacgggccgcaggctggtcagtgacgggaacatt
agcgctgaacgtatccaagagaaagtgatgtctattgaggaaaggcataagaagaatcgt
gaggcagccagtgagcttctcacaaagctgaaagacaacagagatctccagaggttcctc
caggactgtcaggagttgtccctgtggatcagcgagaagatgttaacagcacaggacatg
tcctatgatgaagcacgcaacctgcacagcaagtggctcaaacaccaggccttcatggca
gaactgcagtccaacaaagagtggctggagaaaattcagaaggatggcacagcactggtg
gctgagaagccagagactgaggtggtggtaaaggagaaactggagtctctgaagaagacg
tgggatgagctggagtcaacaacccagaccaaggcccagtgcctgtttgacgccaacaag
gctgagctgttcacacagagctgtgctgacctggataagtggctctctggccttgaaggt
cagatacagtcagatgacttcggcaaagacctgaccagtgtcaacatcttgttgaagaaa
cagcagatgctagaaagccaggtggaagtgcggcagaaggaggtggaggagctgcgtaca
caagcccaagcactcagccaggagggcaaagggtcagacgaggtggacggcctgcgctgt
ggcgtggagaagaagttccacgagctgcaggagccactgaagaaacggcggagcaacttg
atggcctcgcgcgagatccaccaattcaaccgcgatgtggaggatgagattctctgggtt
gaggagagaatgccaatggccacatctacagaacatggcaataatttacaaactgttcag
ctgctcattaagaagaaccagacccttcagaaggagatccagggtcaccagccacgttat
gatgacatttttgagaggagcacgcacatcctgaaggaaaacagtcctgtcagtgcaaca
atccgccagcggttagacgagctaaagcgactctggcgcttgatccaggaggaagtagaa
aaacggcacagacgcctcgaggaagcacacaaagcccagcaatactactttgatgcagca
gaggctgaggcctggatgagcgagcaggagctgtacatgatgtcagaagaaaaggcaaag
gatgagcagagctctgtggcgatgctaaagaaacaccagatcctggagcaggcagtggag
gactacgctgagactgtgcaccaactctctcaaaccagcagggccttagtggctgccgga
cacccagagagtgagagaatcagcatgcgacagtctcaagtggataagctgtatgctggt
ctgaaggacctgtctgaagaaagacgtggaaagcttgacgagagatcctgcctgttccag
ctgaaccgtgaggtggatgatttagagcagtggattgcggagagggaggtggtggcgggt
tctcatgagcttggccaggattacgagcatgtcactatgctacaggagcgtttccgagag
tttgcccgtgacacaggcaacatcggccaggagcgtgctgacgcagtcaacaaaatggca
gacgaactgatcaattcgggtcacgcagacgccgccaccatcgccgagtggaaggatggg
ctcaacgaggcttgggctgacctgctggagttgatcgacactcgcacgcagatcctggct
gcctcctatgagctgcacaagttctaccatgatgccaaggaggtgcttggacgtatccta
gacaaaaacaagaagctcccagaagagctgggcagagaccagaacaccgtcgaggcactg
cagagaatgcacaccacctttgaacacgacatacaggctttgggaacgcaggttaagcag
ctgcaggaggatgcagcccgtttgcagtcagcctacgcaggagataaggctgaggatatc
cagaggcgtgaggcagaggtcctggaggcctggcgttctctgctggaagcgtgcgacgga
cgccgtgtgcgtctaatcgacactaacgacaaattccgcttctttagcatggtgcgtgat
ctgctgctttggatggaggatgtcatccggctcattgatgcgcaggagaaaccaagggac
gtttcatccgtggagcttttaatgaacaatcaccaaggcatcaaggctgagatcgatgct
cgcaatgacagcttcacctcctgcgtcgagttgggaaaaactctactttcacgaaaacac
tacgcttctgaagagatcaaagaaaggttactccagctaacagacaagaggaaagagatg
attgacaagtgggaggaccgatgggaatggctgcgattggttctggaggtgcatcagttc
tcacgggatgcgggtgtggctgaggcgtggctgctgggccaggagccatacctgtccagt
cgagaggtgggtcagagtgtggatgaggtggagaagctcatcaagaggcatgaggctttc
gagaagtcggctgccacttgggaggagcgttttgccgctctggagagacttaccacgatg
gaattactggaagtgagaagacagcaagaggaagaggaaaggaagagacaggcccaacct
gtagaagctccgcctactgagacagcatcaccacagcagagagagagtgaacaggtatct
cagaatgggccgccaccagagcaggactctccccgggaggacacaggaggaagtgatgtc
gttaatggggtggcagagtccagtccaggctcctccccaacaggaagccgcaagaggaaa
ccgggtcaagctgcgacactaccaaccaagtcccaggatacagctgcaccacagatcgag
ggcttcctgaaccgcaagcatgagtgggagggacacaacaagaaagcatccaatagatct
tggcacaatgtctactgtgtgattaataaccaagagctgggcttttacaaagacagcaaa
agtgctagtcagggaatcccataccatggcgaagttcccattagtctgaaggaatccaca
tgcgaggttgcccttgactacaagaagaagaaacatgttttcaaactcaaaatttcgaat
gggaatgagtatctcttccaagccaaagatgatgaggagatgaactcatggatccaggcg
atctcatgcaagacaccctcggagatcagcagccatagcactcctgcctcagcacgcacc
caaaccctgcccacctctggaagcatgggtgccgagtccagccctggcaagaaggagaaa
gacaaagagaagcgcttcagcctcttcaagaagaaatag
DBGET
integrated database retrieval system
