Neoarius graeffei (lesser salmon catfish): 132883357
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Entry
132883357 CDS
T10798
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngra03009
]
132883357 (ddx21)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132883357 (ddx21)
Enzymes [BR:
ngra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132883357 (ddx21)
Ribosome biogenesis [BR:
ngra03009
]
Eukaryotic type
Pre-60S particles
Helicases
132883357 (ddx21)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
132883357 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Gly_acyl_tr_C
Motif
Other DBs
NCBI-GeneID:
132883357
NCBI-ProteinID:
XP_060772860
LinkDB
All DBs
Position
3:complement(45072258..45153706)
Genome browser
AA seq
757 aa
AA seq
DB search
MPSLVLNSSENVVTMNEGLENNFEAKKKKDKTKKKKMTETEESADYDPPAPKKVKREKMD
TANGTAQKSSEVNENFGKKPVKVKNSHSTDELVNPASEQSEKKKKKKKAATPDDTTVDQV
VPSVNGISTKSLKTQAKVSGHFTDSTSSQTSEDSNSESEKDAETPEQKEGAFSNFRISQD
TIKLLQARGVTYLFDIQVKTFNSVYDGKDVIGQARTGTGKTFSFALPLVEKLQSGAEEKR
RGRAPKVLVLAPTRELAIQVTKDFKDITKKLSVHCFYGGSSYNPQVDAIRSGIDVLVGTP
GRIKDHLQNNKLDLSQLKHVVLDEVDQMLDMGFAEQVEEILSASYKKGDDSNPQTLLFSA
TCPPWVYDVAKKYMRSQYVHVDLIGKKSQKAATTVEHLAIACHWSQRAAVIGDVVQVYSG
SHGRTIVFCETKKEAQELSMNTSIKQNAQSLHGDIPQKQRELTLKGFRSGSFEVLVATNV
AARGLDIPEVDLVVQCSPPKDVESYIHRSGRTGRAGRTGICICFYQRREEDQLRYVEQKA
GITFKRVGVPTANDIIKSSSKDAVRFLDSVPPATVEHFRTAAERLIEERGAVEALAAALA
HISGATSLEQRSLLNSDAGYITLVLNCSLEMHNIGYAWRGLKEQLGEGIDDQIKRMTFLR
SKKGVCFDVPADKVKEIQDKWQDGRRWQLTIATELPELEESMRNHGERGSGARVRGRGGF
RSGFHGGNNRSGGRWRGGGGRGRGGPQKRNFSQAFDY
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgccatcattggttttaaacagcagcgagaacgttgtcaccatgaacgaaggattagag
aacaattttgaagccaaaaaaaagaaggacaagaccaagaagaaaaaaatgaccgagacg
gaggagtctgctgactacgatccaccggctcccaaaaaggtcaaacgagaaaagatggac
accgccaacgggacagcgcagaaatcttccgaagttaacgaaaactttgggaagaaacca
gttaaggttaagaacagtcattctactgatgagctcgtgaacccagcaagcgaacagtct
gagaagaagaaaaagaaaaagaaggcagcgacaccagatgacacaacagtcgaccaagta
gtaccatccgtcaatggcattagtaccaaatccctgaagacacaagccaaagtcagcggg
catttcacagactccacctcatcacagaccagtgaagactccaacagtgagagtgaaaag
gatgcggagacgccagagcaaaaagagggcgccttctcgaatttcagaatctcacaagac
accatcaagctactccaagcgcggggtgtgacgtatctgtttgacattcaagtgaagacc
ttcaactcggtgtacgacgggaaggacgtgatcggccaagcccgaaccggcacaggaaag
accttctctttcgctctcccgctagtggagaaactacagtcaggagctgaggagaagaga
agaggcagagcaccaaaggtgctggttctcgctcctactcgagagctagcaattcaggtg
actaaagacttcaaggatatcaccaagaagctctctgttcactgcttctatggaggaagt
tcctacaaccctcaagtggatgccattcgtagcggcatcgacgtacttgttggcacccca
ggccgaataaaagaccaccttcagaacaataaactggatctgtcccagctgaaacatgtg
gtgctggatgaagtggaccaaatgcttgatatgggctttgccgaacaagtggaggagatc
ctctccgcttcctacaaaaaaggtgatgacagcaaccctcagacactgctcttttctgcc
acttgccctccttgggtttacgacgtggcgaaaaaatacatgcgttcccagtacgtccat
gtggatctcatcggcaaaaagtctcagaaagcagccaccacagttgagcatctggccata
gcatgccattggtctcagagggcagcagtgattggtgatgtagtgcaggtgtacagcggc
agccacggacgcaccattgtcttctgtgagaccaagaaggaagcacaggagctgtccatg
aacacctccatcaaacagaatgcacagtctttgcatggagacattcctcagaaacaacga
gagctcacactgaagggcttcaggagtggcagctttgaggtcctggtggccaccaacgtg
gctgcacgaggcctcgatatcccagaagttgatctggttgtacagtgttctcctccaaag
gacgtcgagtcatatattcaccgctctgggcgaactggccgagcaggaagaactggcatc
tgcatctgtttctaccaacgcagagaagaagaccaactgcgatatgtggagcagaaggcg
ggtattactttcaagcgcgttggcgttccaacagctaatgacatcatcaaatcctccagt
aaagatgcagtcaggttcctggattctgtacctccagcaactgtagaacatttccgcaca
gcggccgagaggctaatcgaagagcgaggtgcagtggaggcgctagctgctgcacttgca
cacatttcaggagccacgagtctagagcagagatcgctcctcaactcggatgccggttat
atcacattggtgctcaattgctctctggagatgcataatatcggttatgcttggcgaggg
ctgaaagagcagctcggggagggaatagatgaccagattaaacgcatgaccttcctgagg
agtaaaaagggtgtttgctttgacgtcccagccgacaaggtgaaagaaatccaggacaaa
tggcaagatggccgcaggtggcagctgaccatcgccactgaacttcccgaactggaggaa
agcatgcggaaccatggagaacgagggtctggtgcaagagtcagaggtcgtggtggattc
cgcagcggcttccatggtggcaataaccgaagtggagggagatggagaggaggaggagga
agaggaagaggtggtcctcaaaagaggaacttcagccaggcttttgactattaa
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