Neoarius graeffei (lesser salmon catfish): 132883459
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Entry
132883459 CDS
T10798
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132883459 (lrba)
Membrane trafficking [BR:
ngra04131
]
Endosome - Lysosome transport
Others
Others
132883459 (lrba)
Endosome - Golgi transport
132883459 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
132883459 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
SUKH_6
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_VPS8
EIF3I
Motif
Other DBs
NCBI-GeneID:
132883459
NCBI-ProteinID:
XP_060773109
LinkDB
All DBs
Position
3:63862291..64235672
Genome browser
AA seq
2834 aa
AA seq
DB search
MAEEKAPPGGGGIMPTVPIRGIRMKFAVLEGLIEAGEVTHRDIVETVFNLLVGGQFDLEM
NFVIQETESIVCMVDLLDKCEVTCQAEVWSMFTAVLKKSVRNLQACTDVGLITLVLQRID
RTDSMIADLLVDMLGVLASYSITVKELKLYFSKLQGEKGQWPPHAVKLLSVLKSMAQRSG
PDAFFTFPGKSAAAIALPPIAKWPYQNGFTFHTWLRLDPISNINVDKDKPYLYCFRTSKG
MGYSAHFVGGCLIVTALKAKGKGFQHCVKFDFKPQKWYMVTIVHIYHRWKNSEISCYVNG
ELASYGEITWFVNTSDTFDKCFLGSAETADANRVFCGQMGAVYLFNDALNAAQILAIYQL
GPSYKGVFKYKAESDILFADHHKSLLYDGKLSSSIAFTYNPRATDAQLCLESSPRDNTSI
FIHSPHALMLQDVKAVVTHSVQSAVHSIGGVQVLFPLFTQLDFVQPNSEEPDISVCCTLL
SFLLELLKLSVAMQEQILTCKGFLVIGYSLEKSSKVHVTRPVLDIVLSFARYLSNLPNGI
LLLKQLCDHILFNPAIWIHTPAKVQQVLYTYLATEFISTVTIYNAVRRVGTVLQVMHTLK
YYYWVVNPQDRSGVIPKGLDGPRPNQKEIPALRAFLLLFIKQLIMKDLGVKEDELQSILN
YLLTMHEDDNLMDVLQLLVALMSEHPSSMVQAFDQRNGIRVIYKLLASKSEGIRVQALKV
LGYFLRHLQPKRKSEVMLSHGLFSLLTERLLLHSSQFSMTTYNVLFEILTEQICTQVIHK
QHPEPDSSVKIQSPQILKVIAALLKNSVCPDSMEIRRVFLSDMIKLFNSSRENRRSLLQC
SVWQEWMLSLCFINPSSSEELKITEMVYTVFRILLYHAIKHEWGGWRVWVDTLSITHSKV
TFEQHKESLSRVYNEYQRMGSDSGAEIRTVSGSSRNSEFSAETPVEPPSTIIELKVDEQI
CGEHDGHEERAQVTVSNILARAEEEDVKEGEENDEASILKKQDEGELEASKEKKKNEEDK
PEVAGGKETEGEAVEEETDGDKSVNEDQSEAGVRKSAEASSQKLEADQEANAEKISENDE
DDDKHRTADETEMKVDPGEGGKELERGEAQKKDVVESTSETSVQGDGEEKKEKEEKKSEI
SEEGPRTEVSPSAEEGPDMEVQANVEVSPSTEVVPSADKDPGVQGSPSKETSPSSEEGPS
TQEGPGVQESPSVEVSPITEGDASRQEGPNAEKSPSTHEGSSLSTTEDGQSTQGVPSVKA
PGVPESPSAETGFKPKDVQIARLDVSSVAMDTERLELKDTSAAVGGQAQAAASTLAQNRD
GSSSSPRSSMFRIPEFKWSHMHQRLLTDLLFSIETDVQMWRSHSTKTVMDFVNSSENVVF
VHNTVHLISQVVDNLIMASGGILPLLSAATSSTHELEAIDASQGLEVETSLSYLQRLVSL
VDVLILSSSLNFTEIEAEKNMTSGGVLRQCLRLVCTMAVRSCLECQHHSLCKAGMEKTQQ
GLLGNAKFIPAQSPVDVLTGGVSAIRDVERLLQDMDINRLRAIVFRDIEDSKQAQFLALA
VVYFISVLMVSKYRDILEPHNDKRVNTHTAPSTESVSSDLQNSSPLQRHDSAQPNESSPV
APSDAVSCSAPDAISEALSTLSSEVKGHEDTDKDKKGKSVKVKDILRSLVSSAPADDVIV
EASLLPPAFLGKQELHPQFSSFDRSVVVASKKVGGAPAAGPAPSPSSTLVPQSTSAFSGG
SPVVSVSVVSTDDTAPSVAAESGGAAAAASTLPSVPLSPTTTLSISERLEHALEKAAPLL
REIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAG
LAFIELVNEGRLLSHTMKDHLVRVANEAEFILSRQRAEDIHKHADFESHCAQYAAEKREE
EKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGSSTHRKQCFWRLDFWEDDLRRR
RRLIRNPFGSSHSEATLKSAVEHAPEDDVLKGQQLGKDTARTQSPESESLTEGDDDTISS
LEEKELDTLTGTVSFSTVAELVSPALAMKGTLSITANELYFEVDEDEASFKSIDPKLLAY
TDGLHGKWMFSEMRAIFSRRFLLQNTALEIFLANRTSVMFNFADAATVKKVIYVLPRVGV
GTNFGLPQTRRISLATPKQLFKASNMTQRWQKREISNFEYLMFLNTIAGRTYNDLNQYPV
FPWIISNYDSEELDLTLPSNYRDLSKPIGALNPKRAAFFSERYESWEDEQVPKFHYGTHY
STASFTMMWLLRLEPFTTFFLNFQGGKFDHADRTFSSIARAWRNCQRDTSDVKELIPEFF
YLPEMFINTNDYNLGVMDDGTVVCDVELPPWAKSPEDFVRINRMALESEFVSCQLHQWVD
LIFGYKQRGPEAARALNIYYYLTYEGAVNLSSITDPLLREAVEAQIRSFGQTPSQLLIEP
HPPRSSAMQVTPLMFTEQMQQDVIMVLKFPSNSPVVSVSAHTQAALSNPAIVTVTANRIF
SINKWHGLTGHQSSSNTEQQYQLPVEIDPVIVSNLMHRRQVCDLLDQSVEVNSHCFLVSA
DNRFLFIAGFWDKSFRIYNTDTGKLVQIVFGHRDVVTCVFRSESYIGGDCYVLSGSRDAT
LLLWYWSGKHCCIGDAHSEFVTPRAILTGHDCEVTCASVCAELGVVISGSKDGPCLLHSV
SGELLRVFESSERPTLMKASAEGHCVIYYSSGHVCVYSINGKLLCDTHIEDNIRAMLLSK
DGQYLLCGGERGVLTVWQLHDLKQLFTYPGCDAAIRSMAMTNDQRCIITGMASGSIVLFY
NDFNRWHHEYRTRY
NT seq
8505 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaaagcgccccctggtggagggggcatcatgcctactgtgcccatcagg
gggatccggatgaagtttgccgtgctggagggactcatcgaggctggagaggtcacacac
cgagacatcgtggagacggtgttcaacctgctggtcggtggtcagtttgacctggagatg
aacttcgtcatccaggagacggagagcattgtgtgcatggtggacctgttggataagtgc
gaggtgacgtgtcaggccgaggtgtggagcatgttcacggccgtgctgaagaagagcgtg
aggaacctgcaggcctgcaccgacgtcggcctcatcacgctcgtcctgcagaggatagac
agaacggacagcatgatcgcagacctgttggtggacatgttgggtgttctggcgagttac
agcatcacagtgaaggagctgaagctttatttcagtaaactgcagggagagaaaggacag
tggcctcctcatgctgtgaaactgctctcggtgttgaagtccatggcccaacgctccggc
cctgatgcattcttcacttttcctggaaagagtgcagcggccatagcacttccgccaatc
gctaagtggccataccagaacggcttcaccttccatacctggctgcgtctggatcccatc
agcaacatcaacgtcgataaagacaagccatacctgtactgttttcgcacgagtaaaggg
atgggttattcggcccattttgttggtggttgtctgattgttactgctttaaaggccaaa
gggaaagggttccagcactgcgtcaagttcgacttcaaaccccagaagtggtacatggtg
accatcgtgcatatctaccatcgctggaagaacagtgaaattagctgctatgtgaacgga
gagctggcatcttacggagagatcacgtggttcgtcaacaccagcgatacatttgataaa
tgttttctgggctcggcggagacggcggatgcgaaccgtgtgttttgcggtcagatgggg
gcagtgtatctgttcaatgatgccctcaatgctgcacagatcctcgccatctatcagtta
ggcccctcctacaagggtgtgtttaagtataaagcagaaagcgacatcctgtttgcggat
catcataaatctctgctgtatgatggcaaactgagcagcagcatcgccttcacctacaac
cctcgagctacagacgcccagctgtgcctcgagtcgtcaccccgagacaacacgtccatc
ttcatacactctcctcacgccctgatgctgcaggatgtgaaggctgtggtcactcactcg
gttcagagtgctgttcactccatcggaggagtgcaggttcttttccctctcttcactcag
ttggactttgtgcagccaaacagcgaagaacctgatatctctgtctgctgcactctgttg
tcgttcctgctggagttgttgaagttgtccgtagcgatgcaggagcagatcctcacctgt
aagggcttccttgtcatcggatactctctggaaaagtcttccaaagtccatgtaacgagg
cctgtgctggacatcgttttgtcatttgctcgatacctgagtaacctacccaacggcatc
ttattgctaaaacagctgtgtgatcacatcctgttcaacccggccatctggatacacaca
ccagccaaggtgcagcaggtcttgtacacatatttagccaccgagttcatcagcacagtg
acaatctacaacgccgtgcgccgggtgggaaccgtgctgcaggtcatgcacacgctcaaa
tattattactgggtggttaatccacaggaccgcagtggagtgatacctaaaggcctcgat
ggcccaaggcccaatcagaaggagatccctgctctcagagcgttcctgctgctcttcatc
aagcagctcattatgaaggacttgggagtgaaggaagatgagctgcagagcatcctcaac
tacctgctcaccatgcatgaggatgataacctaatggacgtcctgcagctcctcgtggcg
ttgatgtccgaacacccgagttccatggtgcaggcattcgatcagcgtaacggcatccga
gtaatttacaaactgttggcgtctaaaagtgaagggattcgagtgcaggctctaaaagtg
ttgggttatttcctccgacatttacaacccaagaggaagtctgaggtcatgctgagtcac
ggtttgttttcgctactgactgaacgcctgcttctgcactccagtcagttctccatgacc
acctacaacgtcctgtttgagattctgacagagcagatctgcacacaggtgatccacaag
cagcacccagaaccggactcttctgtcaaaatccaaagcccacagatcctaaaggtgatt
gcagctctgctgaagaacagcgtgtgtcccgacagcatggagattcgccgtgtgtttctg
tccgacatgatcaaactgtttaacagcagccgagaaaacaggaggagtctcctgcagtgc
tcggtgtggcaggagtggatgctctctctctgctttataaatccgagcagcagtgaggag
ctgaagatcacagagatggtgtacaccgtcttccgcatcctcctctatcacgccatcaag
cacgagtggggaggctggcgcgtgtgggtcgacacactctccatcacacactccaaggtc
accttcgagcagcacaaagagagcttatcccgtgtttataacgaataccagcggatgggt
tctgacagtggtgctgagatcagaaccgtttctgggtcgagcaggaacagtgagttttct
gcagagactccggtcgagcctccatccaccattatcgaactcaaggtggacgaacagatc
tgtggagaacatgacggacatgaggaaagagcgcaagtcaccgtttcaaacattttagcc
agagctgaagaagaggatgtgaaagagggggaagaaaatgatgaagcctcaattctgaag
aaacaggatgaaggtgaattggaggcatctaaagagaaaaagaagaatgaggaggacaag
ccggaagtggcaggaggaaaggaaacggaaggagaagctgtggaggaagagacagacggt
gataaatcggttaatgaagaccagagtgaagcaggtgttcgtaaaagtgcagaagcaagc
agccagaagttagaagctgaccaggaagccaatgcagagaagatctcagaaaacgatgaa
gatgatgataaacacagaactgcagatgaaacggaaatgaaagttgacccaggtgaagga
ggaaaagaattagaaagaggtgaggctcaaaagaaagatgtagttgagtcaacttctgag
acttcagtccaaggagatggtgaagagaaaaaagagaaagaggagaagaaatctgagatt
tcagaggagggccccaggacagaggtgagccctagtgcggaggagggtccagacatggaa
gtgcaggccaatgtggaggtgagccccagcacagaggtggtcccaagtgcagacaaagat
cctggtgtccagggaagccctagtaaggagacaagccccagttcagaggagggtccgagt
acacaagagggccccggtgtccaggagagccctagtgtggaggtgagccccatcactgag
ggggacgcaagtaggcaagagggccccaatgcggagaaaagccccagcacgcacgaaggt
tcgagccttagcacgacggaggacggtcagagtactcaaggagtccccagtgtgaaggct
cctggtgtcccggagagccccagtgcggagacgggcttcaagcctaaagatgttcaaatt
gccagactggacgtctccagcgtggcgatggacacggaaagactggagctaaaagacacc
tccgctgctgttggaggccaagcccaagcagcggccagcacattagcacagaaccgagat
ggttcctcatcctcccctcgttccagcatgttccgtatcccggaattcaagtggtctcac
atgcaccagcgcctgttgaccgacctgctcttctccatcgagacagatgtgcagatgtgg
aggagccactccactaagacggtgatggactttgtgaacagcagtgagaacgtggtcttt
gtgcacaacacggtgcatctgatctctcaggtggtggataatctgatcatggcgtctgga
ggaatcctgcctctgctctctgcggccacttcatccacgcacgagctggaggcgattgac
gcgtctcagggtctggaagtggaaacatctctatcctacctgcagcgtctcgtctctctg
gtggacgtcctcatcttgtccagctcgctgaacttcaccgagattgaggcggagaagaac
atgacatcaggaggagtgctgagacagtgcttacgcctcgtgtgcactatggctgtgagg
agttgtttggagtgtcagcatcactctctctgtaaagctggaatggagaaaacacagcaa
ggccttctgggaaatgctaagtttattccagcacagagtcctgttgacgtgctaacagga
ggggtctctgcaatccgagatgtggaacgtctgctacaggacatggacatcaaccgtctc
cgtgccatcgtcttcagagacattgaggacagtaagcaggctcagtttttggctctggct
gttgtttacttcatctccgttctcatggtgtccaaataccgagacattctggagccacac
aatgacaagagagtcaacacacacactgctccgagcacagagagcgtcagttctgatctg
caaaactcctcccctctccaacgtcatgactccgcccaaccaaatgagagctcacctgtt
gccccgagcgatgccgtgtcctgctcggcgccggatgccatctctgaggccctgtccacg
ttgtcatctgaggtcaaaggtcacgaggacacggacaaggacaaaaagggaaagagtgta
aaggtgaaggatattctgcggagcctggtaagctccgcccctgcagatgatgtcatcgtg
gaggcaagtctcttaccaccagcgtttttggggaagcaagaactccacccccagttcagc
tcatttgacaggagcgttgttgtggcatctaaaaaagtgggtggagctcctgcagctggc
cctgccccttccccctcctccactctcgtcccacaatccacctcggccttctcaggtgga
agtccagttgtcagcgtttctgtggtttccacagatgacactgccccaagtgttgctgcg
gagtcaggaggagcagcagcagctgcttcaaccctgccatctgttccactctcacccacc
accaccttgagtatctcggagcgcctggaacatgctctggagaaagctgctccgttactg
cgggagattttcgtggactttgctccattcctgtcccgaactttactcgggagccacgga
caggagctactcatcgagggaacgagtttggtgtgtatgaagtccagtagctctgtagtg
gagctcgtgatgctgctatgttctcaggaatggcagaactccatccagaagaatgcaggt
ttagccttcatcgagctcgtcaatgagggaaggttgctgagtcacacgatgaaggatcat
ctcgtccgtgttgcaaatgaagctgagttcattctgagtcgacagagagctgaggacata
cacaaacatgctgattttgagtctcactgtgctcagtacgccgcggagaagcgtgaagaa
gagaagatgtgcgatcacctgatccgagctgccaaataccgtgatcatgtgaccgccaca
cagctcatccagaagatcatcaacatcctgactgacaaacatggagcctgggggagctcc
actcacaggaagcagtgtttttggcgtttggatttttgggaggatgatctgaggagacgt
cgtcgattgatcaggaatccctttgggtcgtcacactcagaagctacactcaaatctgca
gttgaacatgctccggaagacgacgtgctgaaaggacaacagctggggaaagacacggcg
aggactcagagccccgagagcgagagtttgacggagggagatgacgacacgatctcatct
ctggaggagaaagagctagacactctcacaggcacggtgtctttcagcacggtggccgag
ctcgtctctcctgcactcgccatgaaaggaactctgtccatcacggctaacgagctttac
tttgaggtggacgaagacgaggcgagcttcaagagtatcgaccccaagttgttggcctat
acggacggactgcacgggaagtggatgttctcggagatgcgcgcgatcttctctcggcgg
ttcctcctgcagaacacggcgctggagatcttcctggccaatcggacctcggtgatgttt
aactttgctgatgctgctacagtaaagaaagtcatttacgtgctgccgagagtcggagtc
ggcacgaactttggcctccctcagaccagacggatttctctagcgactcctaaacagctc
tttaaagcctccaacatgactcagcgctggcagaaacgtgaaatctccaactttgagtac
ctcatgttcctcaacaccattgcaggccgcacgtataacgacctgaatcagtatcctgtg
tttccgtggatcatcagcaactatgacagcgaggagctcgacctcacactgcccagcaac
tacagagacctgagcaagcccatcggagccctgaacccgaagagagccgctttcttctcc
gaacgctatgaatcatgggaagatgagcaggtccccaaattccactacggcacacactat
tccacagccagcttcaccatgatgtggctgctgaggctcgagccgttcactacgttcttc
ctcaacttccaaggggggaagtttgatcatgcagaccggaccttctcctccatcgccaga
gcctggagaaactgtcaaagagacacatctgacgtgaaggagctgatcccggagttcttc
tacctgccagagatgttcattaacactaatgactataatctgggagtgatggatgatggg
acagtggtgtgtgatgtcgagctgccgccgtgggcaaagagtccagaggactttgttcgc
atcaaccgcatggcactggagagtgagtttgtgtcatgtcagctccatcagtgggtggat
ctgatctttggctataagcagcgtggacctgaagcagcgcgcgccctcaacatctactac
tacctcacctacgagggagcggtgaatctcagctccatcactgacccactgctgagagag
gctgtagaggctcagatccggagttttggtcagactccgtctcagctgctgattgaacct
catccaccacggagctctgccatgcaggtgaccccactgatgtttacggagcagatgcag
caggatgtgatcatggtgctgaagtttccctcaaactctccagtggtgtccgtgtcagct
cacactcaggccgctctgtcgaaccccgccatcgttaccgtcacggccaatcgcatcttc
tccatcaacaagtggcatggcctcactggtcaccagagctcttcaaacacggagcagcag
taccagctgccggtggagattgaccctgtgatagtgagtaacctgatgcaccgcagacag
gtgtgtgatttactggatcagagtgtggaggtgaactcacactgtttcctcgtctcagcc
gataatcgcttcctcttcatcgccggattctgggacaagagcttccgtatctacaacacc
gacacagggaagctggtgcagattgtgttcggtcaccgtgacgtggtgacatgtgtgttc
cggtccgagtcgtatatcggaggcgattgctacgtgctgagtggctcgagagacgccaca
ctgctgctgtggtactggagcgggaaacactgctgcattggagatgcacatagtgaattt
gtgactcctcgagcaattctgacaggccacgactgtgaagtgacctgcgcaagtgtgtgc
gcggagctcggagtagtcatcagtggctccaaagacggcccgtgtctgttacactcggtc
agtggagagctgctacgtgtgtttgagagcagtgagaggccgacactgatgaaggcgagt
gcagagggacactgtgtcatctactacagctctggacacgtgtgtgtgtacagcatcaac
ggcaaactgctgtgcgacacacacatcgaggataacatcagggctatgttattgagtaag
gatggtcagtacctgctgtgcggaggagagcggggggttctcactgtatggcagctccat
gatctcaaacagctcttcacttatccaggctgcgatgctgccattcgctccatggccatg
accaacgaccaaagatgtatcattactggcatggcatctggcagcattgttctcttctac
aatgatttcaatagatggcaccatgagtaccgaacccggtactga
DBGET
integrated database retrieval system
