Neoarius graeffei (lesser salmon catfish): 132883475
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Entry
132883475 CDS
T10798
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132883475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132883475
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132883475
Enzymes [BR:
ngra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
132883475
Messenger RNA biogenesis [BR:
ngra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
132883475
Transfer RNA biogenesis [BR:
ngra03016
]
Prokaryotic type
tRNA degradation factors
132883475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
OAF_N
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
132883475
NCBI-ProteinID:
XP_060773130
LinkDB
All DBs
Position
3:65180500..65203805
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AA seq
765 aa
AA seq
DB search
MSRFLTLGCSLCRAARRSVWSSHSTERRVGVDLEGRKLEILTGKLARFADGCSVVQLGET
SVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRREIGTSDAEILTSRLIDRSI
RPLFPAGYFYDTQVLCNILAVDGVNDPDVLAINGASAALSVSDIPWNGPVGAVRIGLIDG
EFIVNPTRKEMSSSTLNLVVAGAPSSQVVMMEAAAENVLQQDFCHAIKLGVKHTQQIIHA
IQQLVREHKVVKRMPQKLFSAPPEMVEYTRQLVGEKIYAVFTDFSHDKVSRDEAVNKIRL
DSEEQVKETFPQAEPFEVIEAFNVVSKDIFRNLVLTEYRRCDGRDLTSLRDISCEVDVFK
PLHGSALFQRGQTQVLCTVTFDSIESSVKTDIVTTALSGIKDKNFMLHYEFPPYATNEIG
KMGGLNRRELGHGALAEKALRPVIPKDFPFTIRVTAEVLESNGSSSMASACAGSLALMDA
GVPISSAVAGVAVGLVSKPNPEKLSEIHDYRLLTDILGIEDYNGDMDFKMAGTNKGITAL
QADIKIPGLPLKIVMEAIQQATVAKREILGIMNKSISKPRGSRKENGPVIENVRVPISKR
ARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPHAMHEAQEFITDICKDDQEQQLE
FGAVYTATITEIRDSGVMVKLYPNMSAVLLHNSQLDHKRIKHPTALGLEVGQQIQVKYFG
RDPTDGRMRLSRKVLQSPAATVVKTLSERQSITMGSADGQPSPSS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggttcctgacactcggctgttctctgtgtcgcgctgctcggcggagtgtgtgg
tccagtcatagtacagagaggagagttggagtggacttagagggaagaaaacttgagatc
ttgacagggaaacttgcaagatttgcagatggatgctctgttgttcagctgggagagaca
tcagtgatggtcaccgctgtcagcaagaccaaaccttcaccctcacagttcatgcccctg
gtggtggattacagacagaaagcagcggccgctggacgaatccccaccaactacctgcgg
cgagaaatcggcaccagcgacgctgagattctcaccagcagactgattgatcgttccatc
aggccgctgtttcctgctggatatttctacgacacacaggttctgtgcaacattttagcc
gtcgacggtgtcaacgatcccgatgtcctcgccatcaatggagcatctgctgctctctcc
gtctccgatattccctggaatggacctgttggtgctgtgcgtatcggcctgatcgatgga
gagtttattgtgaatccgacccggaaggagatgagctccagcacgctgaacttggtggta
gcaggagctccttccagccaagtggtgatgatggaagccgccgctgagaacgttctccag
caggacttctgtcacgccattaaactgggagtgaaacacacgcaacagatcatccacgct
atccagcagctggtccgagagcacaaggtggtgaagcgcatgccccagaaactcttcagc
gccccgcccgagatggtggagtacacgcggcagctggttggtgagaagatctacgctgtc
tttacagacttttcacatgataaggtctccagagatgaagctgtgaacaaaatccgactc
gactcggaggagcaagttaaagagacatttcctcaagccgaaccgtttgaagtgatcgag
gccttcaacgtggtttcaaaagacattttccgtaatctggtgctgaccgagtacagaagg
tgcgacggacgagacctaacgtccttaagagatatttcgtgtgaagtggacgtctttaaa
cctctacacggctctgcgctcttccagagaggacaaacgcaggtgctttgcacagtaact
ttcgactctatagagtccagcgtgaaaacagacatcgtaaccacggctctgagtggaatc
aaagacaagaatttcatgctccactatgagtttcctccgtacgcgacgaatgaaatcggg
aaaatgggtggactgaacagacgagagctcggtcatggtgctctggctgaaaaagccctg
agacccgtcattcctaaagacttcccatttacaatccgagtgacggccgaggtgctggag
tccaacggctcatcgtccatggcgtcggcgtgtgcaggcagtctggctttaatggacgca
ggtgtgccgatatcctcagcggtggccggagtggctgtgggtcttgtttccaaaccaaac
cctgagaaactctccgaaatccatgactacagattactcactgatattttagggattgag
gactataatggagacatggattttaaaatggccggaacaaacaaaggcatcactgcgtta
caggctgatattaagatcccaggtcttcctctgaaaattgttatggaggccattcagcag
gcgacagtggcgaagagagagattttagggatcatgaataaaagcatttcgaagccccga
ggctcgaggaaggagaacggccctgttatcgaaaatgtccgcgtgccgatttccaaaaga
gcgcgatttgttggtcctggaggatacaacctccgccgactgcaggcccagacaggcgtg
actatcagccaggtggacgaggagacattctcggtcttcgctccgactccacacgccatg
cacgaggctcaggagttcatcactgacatctgcaaagatgatcaagagcagcagcttgag
ttcggggctgtttacacggcaaccatcacggaaatcagagacagtggggtgatggtgaaa
ctttatcccaacatgagtgctgtgttactgcacaactcccagctcgaccataaacggatc
aaacatcccactgctcttgggctggaggttggccagcagatccaggtgaaatatttcggt
cgcgaccccacagacggcaggatgaggctgtcgcgtaaagtgctccaatctcccgcagcc
acggtggtgaagacgctgagcgagagacagagcatcacgatgggatcagcagacggacag
ccgtcaccttcgtcctga
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