Neoarius graeffei (lesser salmon catfish): 132883591
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Entry
132883591 CDS
T10798
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04010
MAPK signaling pathway
ngra04020
Calcium signaling pathway
ngra04144
Endocytosis
ngra04510
Focal adhesion
ngra04540
Gap junction
ngra04810
Regulation of actin cytoskeleton
Brite
Enzymes [BR:
ngra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
132883591 (pdgfra)
Protein kinases [BR:
ngra01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
132883591 (pdgfra)
CD molecules [BR:
ngra04090
]
Proteins
132883591 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132883591
NCBI-ProteinID:
XP_060773372
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Position
3:complement(78131076..78164375)
Genome browser
AA seq
1463 aa
AA seq
DB search
MWILKTHLLLGVVFFTILQNGVCELSPPIIVSDREEFVLELHSVFNISCTGKRSVTWEEP
LPADTHVLPGYYTAMLMIDSATAQHTGEYMCIYETSENEEPDNIASIYIFVPDPQVPFVP
ENSTEVSQYNIPCRTTDPQSAVILRSLPSGNVLSYAYDQKLGFMGIFSPGQYVCETVVNG
DMVRSMVYTVVNMPIESDVFNVMEKDFSVKLTASQEEIKEGEPFSLTCTAPPGNFYIQEW
LHPSKEAVGAIQKKETYPDKVLYILSISHATTNDTGFYECSVTEQSSGKIRSSQVTITVH
EGSFVTLDHSGIGPVETISLLEEAEFTIYINTDGVPKVTWFKDDHVLNSNYITTKTTLLV
DKRYESVLVLQQPVEEDSGTYKIVASAGSQSKEFSFKLYVKAGEPQIMQSMLAPVIWPRK
DTMVVFLHSMFRLTCRGQSEVVWEGPVPLDKQKLDDKKGLFVSTVTVDNATAAHTGQYTC
FYKKGNQTDDSSIYIFVPDPNMTFLPPLLPFGHHVLKSPEEMEVPCRVSDPSVPVTLFHV
ETQQIMPAEYDPKKGFQGNFMPGTYVCQALVNGELQKSENYIVHGWIGGSGLHVELKVER
KALLAGETLIVNCIAKGSDLLEQQWKYPGKMADRAKTSVKENKKDQEIYYTLIVSDARTK
DSGNYACSITDIMSNEGQTKELTITVYEMEFVSLAPMFAPVETAKLNDVREFQVEIESLP
APKVTWLKDGVVLGDNAAELTTSLRAISETRYQSTLALIRAKAEDSGSYTVRAEIGNQSV
SHSFILQVKVPAVIVDLLDLHHGSETGQAVVCVAGGSPVPEVEWYICKNIKQCSNDSNEW
SPLQTNTTGITIETHMDKDNQLESQVIFGHLENTLAVRCLARNEMVAVSREIKLVSSGPH
SELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPY
DTRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALM
SELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFLSRQAEKGK
KDLDIFGINPADESSRSYVILSFEEKGEYMDMKQADTMQYVPMLERSNASKYFDLQRDDY
DHPPSHKHINESEVEKLLSDDCERLTTMDLLSFTYQVARGMEFLASKNCVHRDLAARNVL
LSHGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILL
WEIFSLGGTPYPGMIVDSSFYNKIKSGYRMAKPEHASSDVYELMVKCWNNEPEKRPSFHS
LSDSVATLLPCGYKRSYERVNNDFLKSDHPAVTRMQCVQSDETYLGVAYKNQCKMRERES
GFEEQRLSSDSGYIIPLPDLDPLSDEEYTKRNRHSSQTSEESAIETGSSSSTLPKREGET
LEDITLLDEMCLDSGDLVEDSFL
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactgaagacacatctccttttgggggttgtcttcttcacaatattgcaaaat
ggggtgtgtgaactgtctcctccaatcatcgtttcggacagagaggagtttgttttagag
ctgcactcagtgtttaacatcagctgtacagggaagaggagcgtcacgtgggaagagcca
ctaccagctgacacacatgtgctacctgggtattacacggccatgctgatgattgacagc
gccacagctcagcacacaggagagtacatgtgcatttatgagacctcagaaaatgaggag
ccagacaacatagccagcatctacattttcgtcccagaccctcaagttccattcgttcct
gagaattccacagaagtctcccagtataacattccttgccggaccacagatcctcaatct
gctgtgattctacggagtctaccaagtggaaatgtgctctcatatgcctatgatcagaag
cttggattcatgggtatcttttctcctggccagtacgtgtgtgagactgttgtgaatggt
gacatggtacggagcatggtgtacacagtggtgaacatgccaattgaatcagatgtgttt
aatgtgatggagaaggattttagtgtgaaactgacagccagtcaggaggagataaaagag
ggagaacctttcagtctgacctgcacagctccacctggaaatttctacatccaggaatgg
ttgcatcccagtaaagaggctgtaggtgctattcagaagaaggagacctaccctgataaa
gttttgtatatcctcagtatctcccatgccacaacgaatgacactggtttctacgaatgc
tctgtcacagagcagtccagcggcaaaatccgctcctcccaagtgaccatcactgtccat
gagggttcttttgttactctggatcacagtgggattggaccagtagaaaccatctctctc
ctggaggaagctgaattcaccatttacatcaatactgatggtgttcccaaagtcacgtgg
tttaaagatgatcatgtactgaatagtaattatataaccaccaagaccactcttctagta
gacaaaaggtacgagagtgttttggttctgcagcagcctgtagaagaggacagtggaaca
tataagattgtggcatcagctggttcacagagtaaagagttctccttcaagctctatgtt
aaagctggtgagccccagataatgcagtccatgctggccccagtaatctggcccaggaaa
gacactatggtggtgttccttcactccatgttcagactgacatgtcggggccaatcagag
gtggtctgggaaggtcccgtcccccttgacaagcagaagttagatgataagaaaggcttg
ttcgtctccacagtgactgtggacaatgctacagcagcacacacaggacaatacacctgt
ttctacaagaaagggaatcagacggatgacagcagcatctacatctttgtgccagatccg
aacatgacattcctgccccccctgttgccttttgggcaccatgtgctgaagagcccagag
gagatggaggttccatgccgcgtgtctgatccgagtgttcctgtgacgctattccatgtg
gagactcagcagatcatgcctgctgagtatgaccccaagaaggggtttcaaggcaacttc
atgcctgggacatatgtgtgtcaagcccttgtgaatggagaactgcaaaagagcgagaat
tacattgttcatggctggatagggggctcagggctgcatgtagagctaaaggtggagagg
aaggctctgctggctggggaaaccctcatagtaaattgtatagccaaaggcagtgacttg
ctggaacaacaatggaaatatcctggaaagatggcggaccgtgccaagacgtcagtaaag
gagaacaagaaagaccaggaaatctattacaccctgattgtgtctgatgccagaactaaa
gacagtggaaattatgcctgttccatcactgacattatgagcaatgagggtcaaaccaaa
gagctcaccattactgtctatgagatggagtttgtatctctagcgccaatgtttgcccct
gtggagacggccaaactgaatgacgttcgtgagttccaagtggaaattgagtctcttcct
gcacccaaagtcacatggctgaaggatggcgttgtactgggtgataatgctgccgagttg
actacctccctccgggcgatcagtgagacaaggtaccagagtaccctcgctctgattaga
gctaaggccgaggacagtggcagctacacggtgcgagctgagataggcaaccagagcgtc
agccactcgttcatccttcaagtcaaagttcctgctgtaattgtggacctgctggatcta
caccatggctcagagacaggccaggctgtggtctgtgttgccggaggatctcctgtccct
gaggtggagtggtacatctgtaaaaacattaaacagtgttccaatgactcaaacgagtgg
tcacctcttcagaccaacaccactggcatcaccattgagacgcacatggacaaggacaac
cagttggagagtcaggtgatctttgggcatctggagaacacgctggccgtgcgctgcctg
gcgcgcaatgagatggttgctgtgtcccgcgagattaaactggtgtccagtggtccacac
tcagagctcactgtggcggctgctgttctggtgctgttggttattgtcatcatctcactc
attgtgctggtcattatctggaaacagaaaccacgctatgagatcaggtggcgtgtcatt
gagtcagtcagtccagatgggcatgagtacatctatgtggatcccatgcagctgccctat
gacacacgctgggagttcccacgtgatggccttgtccttggccgtattctgggctcaggg
gcctttgggaaggtggtggaaggcactgcgtatggactcagtcgttctcagccagtaatg
aaggttgcagtgaagatgctcaaaccaacggctcgctccagtgagaagcaagcactgatg
tcggagctgaagatcatgactcacctggggccccaccttaacattgtcaacctgctgggc
gcatgcaccaaatcaggtcctatctacatcattaccgagtactgtttttatggagacctg
gtgaactacctgcataagaacagagatagcttcctgagtcggcaggctgagaaaggcaag
aaggacctggacatctttggcatcaatccagctgatgagagcagcagaagctacgtgatc
ctgtcatttgaggagaaaggagaatacatggatatgaagcaggcggacacaatgcaatac
gtccccatgttggagaggagcaatgcctccaaatacttcgaccttcagagagatgactat
gatcaccctccctctcacaaacacatcaatgaaagtgaggtagaaaagcttctctcggat
gactgtgagcgtttgaccacaatggatcttcttagcttcacctatcaagtggccagaggg
atggagttcctggcctccaaaaattgtgttcacagagatttggcggctcgaaatgtcctg
ttgtctcatgggaagattgtgaagatctgtgactttgggctggccagggacattatgcac
gacaataactatgtatccaaaggaagtacctttcttccagtcaaatggatggcccctgag
agcatctttgataacctgtacaccactctgagtgatgtctggtcttatggcattttacta
tgggagatcttttctttgggtgggaccccttaccctggcatgattgtggactccagcttc
tataacaagatcaagagtggctacaggatggccaaacctgagcatgcctccagtgatgtt
tatgagctgatggtgaagtgttggaacaatgagccagagaagagaccctcattccatagt
ctgagtgacagtgtggccacactgctaccatgcggatacaagaggagctacgagcgagta
aataacgacttcctgaagagcgaccacccagcagtgacccgcatgcagtgtgtgcagagc
gatgagacctatttgggtgtggcctataagaaccaatgcaagatgagggagcgtgaaagc
ggcttcgaagagcagagactaagctcagacagtggctatatcatcccactgcccgacctt
gaccccctttccgacgaagaatacaccaaaaggaaccgtcacagctctcagacatctgag
gagagtgctatagagacaggttcgagcagctccaccctgcccaagcgggaaggagagact
ttggaggatattacactgctggatgagatgtgcctggactcgggggatctggtggaggac
agcttcctgtga
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