Neoarius graeffei (lesser salmon catfish): 132883743
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Entry
132883743 CDS
T10798
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132883743 (brf1b)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
132883743 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
132883743
NCBI-ProteinID:
XP_060773683
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All DBs
Position
3:95845273..96082948
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AA seq
736 aa
AA seq
DB search
MDTRCTNISPGVRMSARQCKSCGGADIDIDQARGSAVCTACGSVLEDNIIVSEVQFVENS
GGGASAIGQFVSADGPSKAPVIGSGFHTSLGKESRAQTLQNGKRQIHSLGSQLQLNQHCL
DTAFNFFKMVVSKHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTF
LLLARELCINAPAVDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSG
LCGAALLVAARMHEFRRTVKEVIGVVKVCEATLRKRLTEFEDTPTSHLTIDEFMRVDLEE
ECDPPSFIAGQKKLKIQQLEQELAKKLDEYQGEISSYQDEIETELENSRPKLRGIYAMYA
REDTNDGRLSLVSDLVGDEDTEDEEMEAAAQHLNEDFINQVLPKLELGPQRCTEAQEQGK
EAADLPSGSTRVPLTSLLGPLSTAASLGLTDSIRSCMTEEGEDEDKSDNGELDLEGIDEN
EIEKYILNDNEVQAKTQLWMKQNEEYLREQKEKEERIAKEKEQGIYKEKSSPWWPSGGLL
DYHTNEPGSNPSKTLTIYWPKKTSKRREPIRASTAGEAIEKMLEQKKISSKINYDVLRDL
NSKGSSSPAHKTDEVSGIVPGRKKLTRRKKQPNKCNLGLAKPASLMGKRLRPLISSNPKK
KRAATQIVPSAAMLPPVTLETPPAPTPPPVIESGPVTYDEPTEEEDEEEVEEPCVSAMKL
MGGNEYGCEAEEEDVF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaggtgtaccaacatctctcctggagtcaggatgagcgcgaggcagtgtaag
agctgtggtggagcggatatagacatcgaccaggcgcgtggaagtgccgtgtgtactgcc
tgtggctccgtgctcgaggataacatcattgtgtctgaggtgcagtttgtggagaacagc
ggcggaggagcgtctgcgatcggacagtttgtgtctgctgatggtccttcaaaggcccca
gtgattggaagcggcttccacacaagtcttgggaaggagtcacgagcgcagacacttcag
aatgggaaacggcaaatacacagtctgggcagccagctgcagctgaaccagcactgccta
gacacagccttcaatttcttcaagatggtggtgagcaagcatctgacaagggggcgcaag
atggcccacgtcatagctgcctgcctctatctggtgtgccggacagagggcaccccccac
atgcttctggacctgagtgatctcttacaggtgaatgtgtatatcctgggaaagactttt
ctgctgttggccagagaactctgcatcaatgcgcctgctgtcgatccatgtctgtatatt
ccacgctttgcccacatgttagagtttggagagaaaacccatgaagtgtccatgactgca
ctgagattgctgcagaggatgaagagagactggatgcacacaggacgcagaccatctgga
ctctgtggcgcagctctgttggtggcggcccgcatgcatgaattccgccgcacggtgaag
gaggtcattggcgtcgtgaaagtatgtgaggcaactctcagaaagaggctgacagaattt
gaggacacacccaccagtcacttgactattgatgagtttatgcgagtggacctggaggag
gagtgcgatcccccttctttcattgctggtcaaaaaaagttaaagatccagcagctggaa
caggaactggccaagaagcttgatgaatatcaaggtgagatcagctcctatcaggatgag
attgagaccgaactggagaacagcaggcctaagctgagaggaatttacgccatgtatgca
agagaagacaccaatgatggcagactgtctctggtgtcagacctcgtgggagatgaggac
acggaagatgaggagatggaggctgcagctcagcacctcaatgaggacttcatcaaccag
gtgttacctaaactggagctgggccctcagaggtgcacagaggcacaggagcagggtaaa
gaggcggcagacctgcccagtggctccacccgtgtgccactgacttcactgcttggcccg
ctttccaccgctgccagccttggcctcacagactctatccgcagttgtatgactgaggag
ggggaggatgaggacaagtcagataacggcgagcttgatctggaaggcatcgacgagaac
gagatcgaaaagtacattcttaatgacaacgaggtccaggctaagacacagctgtggatg
aagcaaaatgaagagtatctaagggagcagaaagaaaaagaagagaggatagccaaggag
aaagagcaagggatctataaggagaagtcatccccctggtggcctagtgggggtttactg
gattatcacaccaacgaaccaggttcgaatcccagcaaaaccctaacaatatattggccc
aaaaaaacatccaaacgacgagagcccattcgggccagcactgcaggagaggcaatagag
aagatgctggaacagaagaagatttcaagcaaaatcaattacgatgtactgcgagacctg
aacagcaaaggcagcagcagcccagcacacaagacagacgaagtgtctggtattgtccct
ggacgtaagaagctcacccgccgcaagaaacagcccaacaagtgcaatctgggtctggcc
aagcctgcaagcctcatggggaaaaggctccgcccccttatatcatcaaaccctaagaag
aaaagagcagctacacagattgtgcccagtgctgcgatgctgccgccagtgaccctcgag
actccccctgcccctactcctcctccagtcatagagagtggccctgtgacatatgacgag
cccactgaggaagaggatgaggaagaggtggaagagccctgtgttagtgctatgaagctt
atgggagggaacgaatatggctgtgaagccgaagaggaggatgttttttag
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