Neoarius graeffei (lesser salmon catfish): 132883785
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Entry
132883785 CDS
T10798
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Spliceosome [BR:
ngra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132883785 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_MalT
Apis_Csd
TPR_12
Motif
Other DBs
NCBI-GeneID:
132883785
NCBI-ProteinID:
XP_060773777
LinkDB
All DBs
Position
3:101887864..101913061
Genome browser
AA seq
769 aa
AA seq
DB search
MEHSDLQLSDEAMTGMVGANASDNGDAPGTEGAGDSFVPDLPNLAPDAQWTMDQVPDTFA
ALADQQNQEQGQLEQYQQYSVDGHSQSAMEQKSGLSEQHENSAYVDGNQPETNGEATGGH
PQQSELSSEKHAETGSSDSPANMELEDGSKEGGEVVDAAVSKPSLPSDFERLYKVVEDDP
EDFNGWVYLLQYVEQENHLVASRKAFDAFFLRYPYCYGYWKKYADIEKKHGCIQEADEVY
RRGLQAIPLSVDLWLHYITFVKENQDTSDGEAENRIRAAYEHAVLAAGTDFRSDRLWEAY
ISWETEQNKLANVTAVYDRVLGIPTQLYSQHFQRFKDHVQNNHPKHFLSEEEFVQLRLEL
AAANKPSGEGEEEPPSEELPPGTEDLPDPAKRVTEIENMRHKVIETRQEIFNHNEHEVSK
RWAFEEGIKRPYFHVKALEKTQLTNWREYLDFELENGTPERVVVLFERCLIACALYEEFW
IKYAKYLESYSTEGVRHIFKKACTIHLPKKPTIHVLWAAFEEQQGNIDEARGILKSLEEA
VPGLAMVRLRRVSLERRHGNLDEAEALLEDAIRNAKTTSESTFFSVKLARQFLKVQKNGG
KAKKVLLEALEKDETSPKLYLNLLELEYSGDVQQNEAEILACFDRALSSTMPLESRVTFS
QRKVEFLEDFGSDINVLVTAYEHHQKLTKEQESMKRKAENGSQESDSKRQRMDDGSAAST
QMMPDMQTNHGGYNYNNWYQQYNSWGGQNTWGQYGQYGQYNQYYPPPPT
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggaacactctgatctacaactctcagacgaggccatgacggggatggttggtgcaaat
gcctcggacaatggggatgctcctggtacagaaggtgcaggggacagcttcgttcctgac
cttcctaacttggctcctgatgctcagtggacaatggaccaagtacctgacacttttgct
gctcttgcagatcaacagaaccaagaacaaggccagctggagcagtaccagcagtactct
gtagatgggcattcacagtctgcaatggagcaaaaatctggtctttccgaacaacacgaa
aattcagcgtatgttgatggaaatcagccagaaacaaatggagaggctacaggggggcat
ccccaacagtctgagttgagctcagaaaagcatgctgaaacaggcagttcggacagccca
gccaacatggagcttgaggatgggtccaaagagggaggtgaggtggtagatgccgcagtg
tcaaaaccttcactcccctctgacttcgagaggctctataaggtagttgaggatgatcct
gaagactttaatggctgggtctacctcctgcaatatgttgagcaagagaatcacctggtg
gcttcgcgaaaggcatttgatgcgttttttctgcgctatccctattgttatggatactgg
aagaaatatgctgacatagaaaaaaagcatggttgcatacaggaggcagatgaggtgtat
cggcgaggtttgcaggccatcccgctcagcgttgacctttggcttcattatataaccttt
gtaaaggagaaccaagacaccagtgacggagaggctgagaatcgcatacgagctgcctat
gagcatgcagttcttgctgcgggtacagatttccggtcagaccgtctgtgggaagcttat
attagctgggagactgaacagaacaagttggccaatgttacagcagtttatgaccgtgtc
ctcgggattcctactcagctgtattcccagcacttccagaggttcaaggatcatgtgcag
aacaatcatcccaagcacttcctgtctgaagaggagtttgttcagctgaggttggaacta
gcagctgccaataagcccagtggagagggagaagaggaacctcccagcgaagagctgcca
ccaggcacagaagaccttcctgatccagcaaagagggtcaccgagatcgagaacatgcga
cacaaggtgatcgagacccgtcaagagatatttaaccacaacgaacacgaagtcagcaag
cgttgggcctttgaagaagggatcaagcgtccatatttccatgtcaaagccttggagaag
actcagcttaccaactggagggagtacctggactttgagctggagaatgggacgccggag
cgtgtagtggttctgtttgagcgctgcctgatcgcctgtgccctgtacgaggagttttgg
ataaagtatgccaagtacctggagagctacagcacggagggagtgaggcacatcttcaag
aaagcatgcaccatccacctgccaaagaagcctaccatccatgttctctgggcagccttt
gaggagcaacaagggaacattgatgaggctcgaggtatcctgaaaagtctagaggaggca
gttccgggtttggccatggtgagactacgtcgcgtgagccttgaacgtcgtcatgggaac
ttggatgaagcggaagctcttctggaggacgccatcaggaatgcaaaaactacaagtgaa
tcgactttcttctctgtgaagctggctcggcaattcctcaaagtacagaagaacggtgga
aaggctaaaaaagtattgctcgaggccctcgaaaaggatgagaccagtcccaagctttac
ctgaacctgctggagctggagtacagtggagatgtgcagcagaacgaggccgagatcttg
gcatgtttcgaccgggcactgagcagcaccatgccgttggagtcgcgtgtaactttctcg
cagcgaaaagtagagtttcttgaggactttggaagcgatataaatgtgcttgtaactgct
tatgaacaccatcagaaacttacaaaagagcaggagtccatgaagaggaaagcagaaaat
gggtcccaagagtcagattcaaagagacagcgcatggatgatggctcggcagcatctacc
cagatgatgccagacatgcaaactaatcatggaggatacaactataataactggtatcag
caatacaactcctggggaggtcagaacacctggggccagtacggccagtatggccagtat
aaccagtactacccaccacccccgacatga
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integrated database retrieval system
