Neoarius graeffei (lesser salmon catfish): 132883813
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Entry
132883813 CDS
T10798
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132883813 (taf1b)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
132883813 (taf1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
132883813
NCBI-ProteinID:
XP_060773828
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Position
3:complement(105329924..105403332)
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AA seq
583 aa
AA seq
DB search
MDEEITGGYSEACGQCGSVCWGVSDGGQFFCKNCHNVIERTKEVEDVNSLPLNSRISSLS
SGKRKRGEKEGARDWMVCEGFQLILKLQAEALVDLGVCPQFKTDVLWSFWKRYMQKTKQA
YTSEPVNRIRISVPQDLTNGSDNESSVAFSDSSYHSGTASTKGYSTVSGYASDGRSSVCS
GSMDAECYFRPKESKNLMSMPRTLAFCHLALLWVREAITLADLLRLVSKGHIPYINVHAL
FPEEMRFFGKDALIFRVESIPSYSKIHKEAVKLAALMELPAFPPVSRDCLLHPALLSLRY
LMDANLPDKLHALVCEVIQKTSMGDESFLTFDPTERKPRLLCYDLQAAALIVVTMKLLFR
LDDKVEWKLARKADDKGNKMDHGKKRKKSKQGGRMFSLRTWFMTVQPALERAREKEKQAQ
AMQQWKSKKPIISSLKQKTVVLKRRRVVEQLQNSFQALCGSASEQQVSPPSTFLFLWGDE
DGADGPSLRHKCLDCLLTKKKKRWHLVNRKYWHTDLRKCHKSLCGNHFWALEPTLPRMYM
WLLGFFSFMLGVKDAQLHSVVVWVERRLLTRLGRKETPENLSE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagataacaggcggttacagtgaagcctgtggacagtgtggctcagtgtgt
tggggggtttcagatggagggcagttcttctgtaaaaactgccataatgtgattgagaga
acgaaagaagttgaggatgtgaacagtttgcccctcaacagcaggatatcctctttatca
tcagggaaacgaaagcgcggtgaaaaagaaggtgcacgagactggatggtatgcgagggc
tttcagttgatcctgaaacttcaggccgaagctttggttgatctgggagtctgtcctcag
tttaagacagatgtgctatggagtttctggaagcgatacatgcagaagaccaaacaggcg
tacacaagcgaaccagtgaacagaatcagaatttcagtgcctcaggacttgaccaacggc
agcgacaatgagtcatctgttgccttcagtgactcgtcatatcacagtgggactgcctcg
acgaagggatacagcacagtctccggatacgccagtgatgggagatcttcagtgtgttca
ggctctatggatgccgaatgctactttagaccgaaagaaagcaagaacctgatgagcatg
ccccgaacactagcattctgccatctggctctgctttgggtccgggaggccatcactctg
gctgacttgctcaggttggtgtctaagggccacatcccttatattaatgttcatgcactt
tttcctgaagagatgaggttctttggcaaggatgccttgatctttcgagttgagtctatc
ccctcttacagtaagatacacaaggaggcagtaaaactggcggcactgatggagctgcct
gctttccctcctgtgtctcgggactgcctccttcacccagctttgctcagtctacgctat
ttgatggacgctaaccttcctgacaaacttcatgctttggtttgtgaagtaatacagaaa
acatctatgggggatgagtcctttctgacctttgaccctactgagagaaagcctagactt
ctgtgctatgatcttcaagctgcagcactcattgttgtaactatgaaacttctgttcagg
ctggacgataaggtggagtggaagttggccaggaaggcagatgacaaaggaaataaaatg
gaccatggcaagaaaaggaaaaagagcaagcaaggtggaagaatgtttagtttgagaacc
tggtttatgactgtacagcctgcactggagcgagcgagggagaaagaaaagcaggctcag
gccatgcagcagtggaaatctaagaagcccatcatttcatctttgaaacaaaagacggtc
gttctgaaacggagacgtgtggttgagcagctgcagaacagtttccaagctctttgtggc
tcggcttcagagcagcaggtttctccgccatccaccttcctcttcctttggggagacgag
gacggagctgatggacccagtctccgccacaagtgcctggactgtctgctgacgaaaaag
aaaaaaagatggcaccttgtcaaccgtaaatattggcacactgacttgaggaagtgccat
aaaagtctgtgtggaaaccatttctgggcgctggagcctactttgcccaggatgtatatg
tggttgttgggattcttctctttcatgctgggtgttaaagacgcgcagctgcacagcgta
gtcgtctgggtggagcgacgcttactgacacggctgggccgcaaagaaacaccagaaaac
ctcagtgaatga
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