Neoarius graeffei (lesser salmon catfish): 132884320
Help
Entry
132884320 CDS
T10798
Symbol
ube2o
Name
(RefSeq) (E3-independent) E2 ubiquitin-conjugating enzyme
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132884320 (ube2o)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132884320 (ube2o)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
132884320 (ube2o)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
132884320 (ube2o)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-A_UBE2O
SH3-B_UBE2O
UQ_con
SH3-C_UBE2O
F-protein
Motif
Other DBs
NCBI-GeneID:
132884320
NCBI-ProteinID:
XP_060774133
LinkDB
All DBs
Position
4:17668147..17779516
Genome browser
AA seq
1302 aa
AA seq
DB search
MADPVAAAAASSPCPTPGLSPAASPGSEPPSAALSPSAGGTQRLLFSHDLVSGRHRGSLR
FGLVRMIHGEEDWTEDEDEDLDGGGGGREGGGGGRDGGGDGGGGGGGVGGGGGRVPGCSD
TENGAPESRTWPLGRGFVRVQWYPEGTKQDVRETKLKLEDRSIVPRDFVRRMNSNDKQCG
IVTNINTECAVKLVGTNCCLYPVNSRDLQHIWSFMYGDYIVYDFWLGKVYDLSNRIILKL
SNGARCSMSEEDGAKLYDVYPHVSDSGLFFDESYGFYQGQVLIGPAKVFSNVQWLYGVKP
VLSKKSKFRVVVEEVQVVELKVTWITKSYSPQGSDSVFPPPSTITQENLCKVKRLGYFDH
TQRQLGERALYVFPAKGDATRITCEGPEGPQVLPEDPVIRKVKRMFKKHPGKKATESADL
QSSSVQTAGKTDDAEEQQSEAPHDCTEEDSAPQHSNNGPVPNKADEERREQEPTIPQTQW
PLLGELESDEDAAEDTDDTSSITSSASSTASLQSGPSRKKSIPLSIRNLKRKHKKKKTKF
SREFKPGDRVAVEIVSTVTSADVMWKDGRLETGIRSNDLIPIQHLDNHEFCPGDYVVDKR
SQTLQDPSVYGVIQRGDHKARTCVVKWIKLNAPGDDVEVIGEEEDVSVYDISDHPDFHFH
TTDIVIRIGNSGSEEFNDERTVGQVCRVDVSSKVEVVWADNSKSVVLPQHLYNVESEIEE
TYYDSGEGSTSGASSEEWEDESDSWETDNGQVEEEAGTGGEDSTSKTETLPEVKTSTPSA
TAGADTPGTPAPPELPAGGAPTSEEKPSKETPRLAFRELKEALKILESLKNMTVEQLWTG
SPTSPTAEPTGATGTATPADVKPTKEKRFLDDIKKLQENLKKTLDNVAIAEEEKMEEERV
SAPVEPQTPVRSEWPSDTPVLCQQSGGKPGVTFTSAKGEVFSVLEWAPDTHTFKKMEFQP
AEAKKFFSTVRKEMALLATSLPDGIMVKTFEDRMDLFSALIKGPTRTPYEDGLFLFDIQL
PNIYPAVPPLFRYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWTSKSSLLQVLISI
QGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMTLIKMVQSMTQLLVQPVEVFQQEIR
EHFCTSGWRLVQRLESWLELDTAVSERGARNAGTMRAEPLDEEVPEALAHSSPAGKPESR
GEEELEDSGLGASKDLSLNSDLDGSRGAEPAQQGGKVAQESQPSVRPKKRRRSYRSFLPE
RSGYPDIGFPLFPLSKGFVKSVRGVLFQYRAALNAAGIPEEK
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcctgtggcagcagcagcagcatcctctccgtgtccgactccgggcctttct
ccagcggcgagtccgggctctgagcctccctccgcggctctgtctccgtcggcgggcggc
acacagcggctccttttctcgcatgacttggtgtctggtcggcaccgcggttcactgcgc
ttcggcctcgtgcgaatgatccacggagaggaggactggaccgaggacgaggatgaggac
cttgatggcggcggaggaggcagagaaggtggtggaggaggcagagacggcggtggagac
ggcggcggaggaggaggaggagtcgggggaggcggcggtcgtgtccccgggtgctcggat
actgagaacggggcaccggagtcccgaacgtggcctctcggtaggggtttcgtgcgcgtg
cagtggtatcccgagggaacgaagcaggatgttcgggaaacgaagctgaaacttgaagat
cgatccattgtgcctcgagactttgtgcgccgaatgaattcgaatgataagcagtgtggt
atagtgaccaacattaacacagagtgcgccgtgaaactggtggggaccaactgttgttta
tatcctgtaaatagccgagacctgcaacacatctggtctttcatgtatggtgattacatt
gtgtacgatttctggctggggaaggtgtatgacctcagcaatcgcatcatcctgaagctg
tccaacggagcacgatgttcaatgagtgaagaagacggagccaaactctacgacgtttac
ccacatgtcagtgattcggggctgttctttgacgagtcgtacggcttttaccagggtcag
gtcctcatcgggccggctaaggtcttctccaatgtgcaatggctgtacggcgtgaagccc
gtcctcagcaagaagagcaaattcagagtggtagtagaagaggtacaggttgtggagctc
aaagtgacgtggatcaccaagagctactctcctcaaggctcggatagcgtcttcccccct
ccatccaccatcacacaggagaacctctgcaaagtgaagcgtctggggtactttgaccac
acacagaggcagctgggtgagagagctctgtacgtctttcctgctaaaggagatgcaaca
cgaatcacctgcgagggcccagaggggccacaggtcttacccgaggacccagtcatccgg
aaggtcaaacgaatgtttaaaaagcacccaggaaagaaggcgacagagagcgctgacttg
cagtccagcagtgtgcagacggctgggaaaacggatgacgctgaagagcaacagtcggag
gcacctcatgactgtacagaggaggactcggcaccacaacactccaataatggtcccgtc
ccaaacaaggcagatgaggaaagaagggagcaagagcccaccattccacagacacagtgg
cctcttctcggggagttggagtcagatgaggatgccgcagaggacacggatgacacgagc
tcaatcacttcttcggccagttccacagcctcgctgcaaagcggcccaagcagaaagaag
agcatccctctgtctatccgcaacctgaagaggaaacacaagaagaagaagaccaagttc
tctcgagagttcaaaccaggagacagagtggcagtggagattgtttccacggttacctca
gctgatgtcatgtggaaggacggtcgactagagacagggattcgttctaacgacctcatc
ccaatccaacacctggacaaccatgagttctgccctggagactatgtagtggacaaacgc
agccaaacgctgcaggacccaagcgtgtatggtgtgattcagagaggagaccataaagcc
aggacatgtgtggtgaagtggatcaaactgaacgctccaggggatgatgtggaggtgatc
ggtgaggaggaagatgtcagtgtttatgatatatcggatcaccccgacttccactttcac
accacagacatcgtcatacggataggcaactcgggctcggaggagttcaacgatgaaagg
actgtgggacaggtgtgccgagttgatgtcagcagtaaggtggaggttgtctgggctgat
aactctaaatctgtcgtcttgccccagcacctttacaacgttgagtcagagattgaggag
acgtattacgattctggcgagggcagcaccagcggcgcctcctcagaagaatgggaggac
gaaagcgacagctgggagactgataatggccaggtagaggaggaggcggggacaggtgga
gaagactccacctccaaaacagaaactctgcctgaggtcaaaacctcgacgcccagtgcc
acggctggcgcagacacaccagggacacctgctccacctgaactgccagcaggtggagca
ccaacaagtgaggagaagcccagtaaagagacgccgcggctggccttccgcgagctcaag
gaggccctgaagatcctggaaagcctgaagaacatgacagtggagcagctgtggactggc
tcacccacctcacccactgccgagccaacaggtgccactggcaccgccaccccagctgat
gtcaagcccacgaaggagaaacgcttcctggatgacattaagaagctgcaagagaacctg
aagaaaacactggacaatgtggccatcgcagaagaggagaagatggaagaggagcgggtg
tcagcccccgtcgagcctcagacaccagtgcgctctgagtggcccagtgatacgcctgtc
ctgtgccagcaaagtggcggtaaacctggtgttacattcaccagtgccaagggcgaggta
ttctctgtgctcgagtgggcaccagacacccacacgttcaagaagatggagttccaacca
gctgaagctaagaagttcttcagtacagtcagaaaggagatggctttgctggccacttca
ctgcctgatggcattatggtcaagacatttgaggaccgcatggacttgttctcagctcta
atcaagggccctacacgtacaccatatgaggatggcctgttcttgtttgacatccaattg
cccaatatctaccccgctgtaccgccactattccgctacctgtcacagtgcagcggacgc
ctcaacccgaacctctacgacaacggcaaagtgtgtgtcagcctgctaggcacatggatt
ggcaagggcacagagaggtggacaagcaagtcgagtctcctgcaggtgctcatctctatt
caaggcctgattttggtcaacgagccgtattacaacgaggcgggctttgacagtgaccgc
ggcctgcaggagggctatgaaaacagtcgttgctacaacgagatgaccctcatcaaaatg
gtgcaatccatgacgcagctcctggtgcagccagttgaggtcttccagcaggagatacgt
gagcacttctgcaccagcggctggagacttgtgcagcggctcgaatcctggctggagctg
gacacggccgtgtctgaacgtggtgctcgaaatgctggcaccatgcgggctgagccactg
gacgaggaggttcctgaggcgctggcacacagcagccctgcaggcaaacccgagtccaga
ggtgaggaggagcttgaagactctggtctcggtgcctccaaggacctcagcctgaactcc
gatttggacggctccagaggggcagagcctgcacagcaaggtggcaaagtggcacaggaa
tctcagccttctgtcaggccgaagaagcggagacggagctaccgcagcttccttcctgaa
cggagcggctacccagacatcggcttcccgttgtttcccctctcaaaaggctttgttaag
agtgtgcgtggcgtcctgtttcagtatcgtgcagcactgaatgctgccggcattcctgaa
gagaaataa
DBGET
integrated database retrieval system
