Neoarius graeffei (lesser salmon catfish): 132884374
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Entry
132884374 CDS
T10798
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04060
Cytokine-cytokine receptor interaction
ngra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132884374 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
132884374 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ngra04052
]
132884374 (gdf5)
Cytokines and neuropeptides [BR:
ngra04052
]
Cytokines
Transforming growth factors (RSTK binding)
132884374 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
132884374
NCBI-ProteinID:
XP_060774199
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Position
4:complement(45191217..45209490)
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AA seq
436 aa
AA seq
DB search
MNVHALFFGCCALLCVDLVSQALGLKPKPRLTSSAANSGAKISRIRAATPPIPAEKMPPY
RAAHASSGFTSCASGGKAVLMEHKRPSAKRSVKVKGKAKERETPRQPVVTPHDYMLSLYW
SLSTGQMNQSAMHEAGMANTITSFVDKGQDEHVPLLRRQRYYFNISSLEKDGLLGAELRI
LRKPFTDPLRIPATESRTSLRLYTCATSKQRAMLLQSQPIDNRSIQKWEVFDIWKVFKRF
RNTIQLCFELEAMDRGRPLDLRSLGLDRSGRQNKEKAFFVVFSHTKKHGLFYNEIKARSG
HDNKTVYEYLFTQRRMRRAPKPSVKKPSRSPKTRCNRKQLHVNFKEMGWDDWIIAPLEYE
AFHCDGICDFPIRSHLEPTNHAIIQTLMNSMDSHLTPPTCCVPTRLSPISILYIDSANNV
VYKQYEDMMVESCGCR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgcatgctttgttcttcggatgctgtgcgcttttgtgcgtggacttggtatcg
caagcccttggtctcaaacccaaaccgaggttaacgtcctcggcagcgaacagcggcgcc
aagatctcgcgcattcgcgctgcgacgccaccgattccggccgaaaagatgcccccgtac
cgcgcggcgcacgcgtcctcaggattcacctcatgcgccagtggaggaaaagccgtcctc
atggagcataaaagaccgtcggcaaaaaggagcgtgaaggtgaaaggcaaagcgaaggag
agagagacaccgagacaaccggttgtcacaccgcatgattacatgctgtccctttactgg
tctctgtccaccgggcagatgaaccagagcgcaatgcacgaggcgggcatggccaacacc
atcacgagcttcgtggacaaaggacaagatgagcatgtgcccctgttaaggcgtcagagg
tattattttaacatcagctccctggagaaggatggactgctgggagctgaattacgcatt
ctcagaaagcccttcactgatcctcttagaatccctgccactgagagcagaacctctctt
cgactttacacatgcgccacaagtaagcagagggcaatgctgctccagtcgcagcccata
gacaatcgcagtatccaaaaatgggaagtgtttgacatttggaaagttttcaagcgtttc
agaaacactattcagctttgttttgagttggaggcaatggatcggggccgcccattggac
ctcaggtcacttggcctggatcgttcaggccggcaaaacaaggagaaggccttctttgtg
gtgttcagccacacaaagaaacatggtctcttttacaatgagatcaaggcacgctcaggc
catgataacaaaactgtgtatgagtacctgtttactcagcgcaggatgcgacgggcacca
aagccaagtgtcaagaagccaagcagaagtccaaagacacggtgcaaccgcaagcagctg
catgtcaattttaaggagatgggttgggatgattggatcattgcaccattggagtatgag
gccttccactgtgatggaatttgtgattttcccatccgctcacatctggaacccaccaat
cacgccatcatccagacactcatgaactctatggattctcacttgacaccacccacttgc
tgtgtacccaccagacttagtcctatcagtatcctctacattgattcagctaataatgtt
gtgtacaagcaatatgaggacatgatggtagagagttgtggctgtagatag
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