KEGG   Neoarius graeffei (lesser salmon catfish): 132884716
Entry
132884716         CDS       T10798                                 
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    132884716 (trim25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ngra04121]
    132884716 (trim25)
Enzymes [BR:ngra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132884716 (trim25)
Ubiquitin system [BR:ngra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    132884716 (trim25)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-RING_2 ANCHR-like_BBOX zf-B_box zf-RING_5 zf-C3HC4_3 zf-C3HC4_2 zf-Nse RING_XB3-XBAT31 zf-UBP_var
Other DBs
NCBI-GeneID: 132884716
NCBI-ProteinID: XP_060774574
LinkDB
Position
4:complement(2234622..2253624)
AA seq 662 aa
MAEVTDSVALLSLEDDLTCSICLCPFDEPVSLNCGHSFCRRCLEETWNSASSYYCPHCRA
HYLTKPDLKKNTVLSAVVDTFRAKAGAGSEGGMDASFGAGGVSRTSRPEPKPIMCDMCNE
AKAVKTCLTCITSFCTEHVRPHQENPLFRAHELCEPLSDLAERLCPDHGKLMEFYCARHE
RSICSSCLQQSHKECGFSTPNEQRMKIESELQDKLNILERKTEKNQLVITQMREQQAKLK
EMAVMRKRALEAEYQQIRELLLKDEQEAIDAVEKDLETGNSKLNTLIKKFSQNIEKMSST
RAEINNLLAKSHSLDFLQASVEMPSVVNFDPYSPRINLDSKRTIAYHSNIVNLKEQIHKI
LREPVENRISFLKPGAGGASVNQPNLKEPGSTLGEASGTPSSGSQPKGAPGGARKKSQPR
DKKENRDHKDHKAERANKGSNKGMNPALSKSMDNLDNLTKRPFIAVPVDMSSATINAATR
SDLLKYAATLTFDIRTAHKRVVLSEHNTKASVSDEPSAYPDIPPRFTVCSQVLCHQSFSR
GCHYWEVKLSSSNFCGLGLAYASIDRKGPSSRLGRNAQSWCIEWFNVKLSAWHNSGETVL
ANPNPKRVGVLLDCNNGTATFYNVQDRAYPLHTFVFPFSEAVYPAFWIFSSGSAITLCKL
SN
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcagaagtgaccgactctgtggctctgctgagccttgaagacgatctgacctgcagc
atctgcttgtgccctttcgatgagccggtgagtctgaactgcggtcacagcttctgccgc
aggtgtctggaggagacgtggaacagcgcgagctcctattactgcccacactgccgcgct
cactacctcaccaagccagatctgaagaagaacacggtgctcagcgcagtggtcgacacc
ttcagggccaaagctggagcagggtcagaaggagggatggacgccagcttcggtgctggt
ggtgtgtcgcgcacatcacgccctgagcccaagcccatcatgtgcgacatgtgcaacgag
gccaaggcggtgaaaacatgtctgacatgcatcacgtcattctgcacagagcatgtccgc
cctcaccaggagaaccctctgttccgtgcccacgagctctgcgagccgctttccgacctc
gctgagcggctgtgtcctgatcacgggaaactgatggaattctactgcgcacgccatgag
aggagcatctgcagcagctgtttgcagcagagtcacaaggagtgtggattctccaccccc
aacgaacagcgcatgaagatagagtctgagctgcaagacaagctgaacattctggaaagg
aaaacggagaagaaccagctggtcataacgcagatgagggagcagcaagcgaagctcaag
gaaatggcggtgatgcgtaaacgcgctctggaggcggagtatcagcagatccgtgagctg
ctgctgaaggacgagcaagaggccatagacgctgtggagaaagacctggagaccggcaac
agcaagctcaacaccctcataaagaaattcagccagaacatcgagaagatgagctccacc
agagctgagatcaacaacctgctggccaaatcccactctctggatttcttacaggcgtct
gttgaaatgccgtctgtggtgaactttgacccttactcaccgcgaatcaacctggactcc
aagcgcaccatcgcatatcacagcaacatcgttaacctgaaggagcagattcataaaatt
ctgcgtgagcccgtggagaacaggatttccttcctcaaaccaggtgccggtggagcttca
gttaatcagccaaacctgaaggaaccaggttctaccctaggtgaagcttcaggaaccccg
agctctggatcacagcccaaaggcgctcctggaggagcgagaaaaaaatctcagcctagg
gataaaaaggagaaccgagatcacaaagatcacaaagcagaacgagctaataaaggttct
aataaaggaatgaatccagcgttatccaagagcatggacaatctggataatctgactaaa
agaccttttatcgcagttccggttgatatgagttcagcaaccatcaacgctgcgaccaga
agtgacctgctgaagtatgctgccacgctgacctttgacatcaggacggcgcataaacga
gtggtgctctctgagcacaacaccaaggcatctgtatcagacgagccgtctgcatatcca
gacatcccgcctcgcttcaccgtgtgctcgcaggtgctctgtcatcagagcttttctcgc
ggctgccattactgggaggtcaaactgagcagcagtaacttctgtggtttgggtctggcg
tacgcctccatcgatcggaaaggtccgtctagccgcctgggccgtaacgcgcagtcctgg
tgcatcgagtggtttaacgtcaagctttcggcgtggcataacagcggcgagaccgtgctg
gccaacccgaacccgaagcgcgtcggcgtcttactcgactgcaataacggtaccgccacc
ttctacaacgtgcaggaccgcgcgtaccccttgcacaccttcgtctttcctttctctgag
gccgtgtatccagctttctggatcttctccagcgggtcggccattaccctttgcaaactg
agtaattaa

DBGET integrated database retrieval system