Neoarius graeffei (lesser salmon catfish): 132884716
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Entry
132884716 CDS
T10798
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
132884716 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132884716 (trim25)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132884716 (trim25)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132884716 (trim25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-RING_2
ANCHR-like_BBOX
zf-B_box
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
zf-Nse
RING_XB3-XBAT31
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
132884716
NCBI-ProteinID:
XP_060774574
LinkDB
All DBs
Position
4:complement(2234622..2253624)
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AA seq
662 aa
AA seq
DB search
MAEVTDSVALLSLEDDLTCSICLCPFDEPVSLNCGHSFCRRCLEETWNSASSYYCPHCRA
HYLTKPDLKKNTVLSAVVDTFRAKAGAGSEGGMDASFGAGGVSRTSRPEPKPIMCDMCNE
AKAVKTCLTCITSFCTEHVRPHQENPLFRAHELCEPLSDLAERLCPDHGKLMEFYCARHE
RSICSSCLQQSHKECGFSTPNEQRMKIESELQDKLNILERKTEKNQLVITQMREQQAKLK
EMAVMRKRALEAEYQQIRELLLKDEQEAIDAVEKDLETGNSKLNTLIKKFSQNIEKMSST
RAEINNLLAKSHSLDFLQASVEMPSVVNFDPYSPRINLDSKRTIAYHSNIVNLKEQIHKI
LREPVENRISFLKPGAGGASVNQPNLKEPGSTLGEASGTPSSGSQPKGAPGGARKKSQPR
DKKENRDHKDHKAERANKGSNKGMNPALSKSMDNLDNLTKRPFIAVPVDMSSATINAATR
SDLLKYAATLTFDIRTAHKRVVLSEHNTKASVSDEPSAYPDIPPRFTVCSQVLCHQSFSR
GCHYWEVKLSSSNFCGLGLAYASIDRKGPSSRLGRNAQSWCIEWFNVKLSAWHNSGETVL
ANPNPKRVGVLLDCNNGTATFYNVQDRAYPLHTFVFPFSEAVYPAFWIFSSGSAITLCKL
SN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtgaccgactctgtggctctgctgagccttgaagacgatctgacctgcagc
atctgcttgtgccctttcgatgagccggtgagtctgaactgcggtcacagcttctgccgc
aggtgtctggaggagacgtggaacagcgcgagctcctattactgcccacactgccgcgct
cactacctcaccaagccagatctgaagaagaacacggtgctcagcgcagtggtcgacacc
ttcagggccaaagctggagcagggtcagaaggagggatggacgccagcttcggtgctggt
ggtgtgtcgcgcacatcacgccctgagcccaagcccatcatgtgcgacatgtgcaacgag
gccaaggcggtgaaaacatgtctgacatgcatcacgtcattctgcacagagcatgtccgc
cctcaccaggagaaccctctgttccgtgcccacgagctctgcgagccgctttccgacctc
gctgagcggctgtgtcctgatcacgggaaactgatggaattctactgcgcacgccatgag
aggagcatctgcagcagctgtttgcagcagagtcacaaggagtgtggattctccaccccc
aacgaacagcgcatgaagatagagtctgagctgcaagacaagctgaacattctggaaagg
aaaacggagaagaaccagctggtcataacgcagatgagggagcagcaagcgaagctcaag
gaaatggcggtgatgcgtaaacgcgctctggaggcggagtatcagcagatccgtgagctg
ctgctgaaggacgagcaagaggccatagacgctgtggagaaagacctggagaccggcaac
agcaagctcaacaccctcataaagaaattcagccagaacatcgagaagatgagctccacc
agagctgagatcaacaacctgctggccaaatcccactctctggatttcttacaggcgtct
gttgaaatgccgtctgtggtgaactttgacccttactcaccgcgaatcaacctggactcc
aagcgcaccatcgcatatcacagcaacatcgttaacctgaaggagcagattcataaaatt
ctgcgtgagcccgtggagaacaggatttccttcctcaaaccaggtgccggtggagcttca
gttaatcagccaaacctgaaggaaccaggttctaccctaggtgaagcttcaggaaccccg
agctctggatcacagcccaaaggcgctcctggaggagcgagaaaaaaatctcagcctagg
gataaaaaggagaaccgagatcacaaagatcacaaagcagaacgagctaataaaggttct
aataaaggaatgaatccagcgttatccaagagcatggacaatctggataatctgactaaa
agaccttttatcgcagttccggttgatatgagttcagcaaccatcaacgctgcgaccaga
agtgacctgctgaagtatgctgccacgctgacctttgacatcaggacggcgcataaacga
gtggtgctctctgagcacaacaccaaggcatctgtatcagacgagccgtctgcatatcca
gacatcccgcctcgcttcaccgtgtgctcgcaggtgctctgtcatcagagcttttctcgc
ggctgccattactgggaggtcaaactgagcagcagtaacttctgtggtttgggtctggcg
tacgcctccatcgatcggaaaggtccgtctagccgcctgggccgtaacgcgcagtcctgg
tgcatcgagtggtttaacgtcaagctttcggcgtggcataacagcggcgagaccgtgctg
gccaacccgaacccgaagcgcgtcggcgtcttactcgactgcaataacggtaccgccacc
ttctacaacgtgcaggaccgcgcgtaccccttgcacaccttcgtctttcctttctctgag
gccgtgtatccagctttctggatcttctccagcgggtcggccattaccctttgcaaactg
agtaattaa
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