Neoarius graeffei (lesser salmon catfish): 132884816
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Entry
132884816 CDS
T10798
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04140
Autophagy - animal
ngra04148
Efferocytosis
ngra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132884816 (vps16)
04148 Efferocytosis
132884816 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132884816 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132884816 (vps16)
Membrane trafficking [BR:
ngra04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132884816 (vps16)
Hops complex
132884816 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF740
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
132884816
NCBI-ProteinID:
XP_060774778
LinkDB
All DBs
Position
4:complement(8431401..8444425)
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AA seq
835 aa
AA seq
DB search
MAFVTASWNPLGENFYRKIELYEMGWNLKDGLRDCLTAAAPYGGPIALLREPQHRSPSAR
PQLEIYSASGGSLASFPWKSGVVKHLGWTVCDDLLCIQEDGTVLVYDLFGSFKRHFSMGN
EVGQSQVLEAKVFHSPYGTGIAIVTGASRFTLATNIDDLKLRRLPEVQGLQGAPTCWAVL
TQDRQSKVLVANGADLFILDYTTCTEVNPPGLSPQASSIVHMCVSFSYKYLALFTDSGHV
WMGSTNLKEKLSEVETKVRNPPRQMAWCRRPKSQQPSVVVMWDRYLLVVGVCKDTIPYHL
DDDSLLVPELDSVRIINATNHELLQEVPASCEEIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQNLLGEAVRQCVEAAGHEHEAETQKSLLRAASFGKCFLSNFSPEPFVSMCR
DLRVLNAVRDYTVGIPLTHTQFKQMTVQVLTDRLVYRKLYPLAIEICRYLKTPEYQGVSR
VLKHWACCKVQQKEEADEVIARNISLKLGDAAGISYSEIANKAYECGRTELAIKLLEFEP
RSGEQVPLLLRMKRSQLALSKAIESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKHQEQDTLKDLFNQDDDHQELGNFYVKASYKEKRLEARVSLLQSAVDEYNKAKNE
FATKATEEEMRLLRFQRKLEEDKGEYLTGFSLHDTLSTLLSLGLHKHAEQLYKDFRVPDK
RYWWLKLTALADKADWEELEKFAKSKKSPIGYLHFVEACVKRNNRFEAKKYVSKVTPEQK
VKAHLAVGDLEGAASAAIERRNEGEINTVLSHCSSTTDRALVERLNRAKTTATKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgtcacggccagctggaatcctcttggagagaatttttacaggaagattgag
ctgtatgaaatgggctggaatctgaaggatggtctcagagattgtttaacagctgcagct
ccatacggtgggccaatcgccctgctgagggagcctcaacaccgctctcccagcgcccga
ccccagttagagatctactccgcttctggagggagtctcgccagctttccgtggaagagc
ggtgtggtgaagcatctaggctggacggtgtgtgacgatctactgtgcattcaggaggat
ggcactgttctcgtttacgacctctttggcagtttcaagagacacttcagcatgggcaat
gaggtgggacagagccaggttctcgaggccaaggttttccattcgccatatggaactgga
attgccatagtaaccggagcatcccggtttaccctggcaacaaacattgatgatctgaag
ctgaggaggttacctgaggtgcaaggtctccagggggcgccgacttgctgggcagtgcta
acccaggaccgacagagtaaagtgctggtggcaaacggtgctgatctttttattttggac
tacaccacatgtactgaagtgaaccctccaggcctctctcctcaggcctccagtatagta
cacatgtgtgtatccttcagctataagtacctggcgctgtttaccgactcgggccatgtg
tggatgggctccaccaacctgaaggaaaaactcagtgaggtagagaccaaagtcagaaat
ccacccagacagatggcatggtgtcgcaggcctaaaagtcagcagccctcagtggtggtc
atgtgggatcggtacctgctggttgtaggagtgtgtaaagacactatcccataccacctc
gacgacgactcgcttctggtcccagagctggacagtgttcgaatcatcaacgccacaaat
catgaactgttgcaggaggtaccagcttcctgtgaggaaatctttaaaattgcctccatg
gctcctggagcactgctgctggaggctcacaaagaatatgagaaagagagccagaaggcg
gatgagtatctgagggagattaaggagcagaatctgttgggggaggcggtgaggcagtgt
gtcgaggcagcaggacatgagcatgaggcagagacgcaaaaatccctcctgagggcggcc
tccttcggaaaatgttttctcagtaatttttcccctgagccgtttgtcagcatgtgtcga
gacctgcgagtgttaaacgcagtgagagattacaccgtgggaatccctctcacacacact
cagttcaaacagatgactgttcaagtgctcacagaccgactagtatatcgcaagctgtat
cctcttgccatcgagatctgccgctatctgaaaactcctgagtaccagggtgtgagtcga
gtgctcaaacactgggcctgttgtaaggtgcagcagaaagaggaggctgatgaggtcatt
gcgaggaacatcagtctcaagctgggtgatgctgctggaatctcctactctgagattgca
aacaaagcctatgaatgcggacgcactgaactcgctataaagctgctggagtttgagcct
cgctctggtgagcaggttcctctgctgctgaggatgaagaggagccagttagcgctcagc
aaagctatcgagagtggagacacggaccttgtgtacacagtggtaacgtacctgaagaat
gagatgaacagaggagacttcttcatgactcttcggaaccagcctgtggcccttagcctc
tacagacagttctgtaagcatcaggaacaggatacgctgaaggatctctttaatcaagat
gacgatcaccaggaactgggcaatttctacgtgaaagctagttacaaagaaaagaggctg
gaggctcgagtgtctttattacaaagtgcagtagatgagtacaacaaggccaagaatgaa
tttgctaccaaggccacagaggaggagatgcgtctgttgcgtttccagaggaagctggag
gaggataaaggcgagtacctcaccggtttctctctgcacgatactctgagcaccttgctg
tctctgggtctgcacaagcacgctgagcagctctacaaggacttcagagtgcccgataag
aggtattggtggctgaagctgacagcactggctgataaagcagactgggaggagcttgag
aaatttgccaaaagcaagaaatcgcccatcggctacctgcactttgttgaagcctgcgtg
aaacgaaacaacagattcgaggccaagaaatatgtgtcgaaggtcacaccggagcagaag
gtcaaagcccacctggcagtaggtgatttggaaggggcagcaagtgcagctattgagagg
aggaacgagggagagatcaacacggtcctgtctcactgttcctccacaacagaccgtgcg
ctggtagaacgtcttaaccgtgccaagaccactgccaccaaaaagtga
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