Neoarius graeffei (lesser salmon catfish): 132884832
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Entry
132884832 CDS
T10798
Symbol
cacna1ia
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04010
MAPK signaling pathway
ngra04020
Calcium signaling pathway
Brite
Ion channels [BR:
ngra04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132884832 (cacna1ia)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132884832
NCBI-ProteinID:
XP_060774800
LinkDB
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Position
4:complement(10786518..11217603)
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AA seq
2232 aa
AA seq
DB search
MITEEERPTAVGVSSPGADSSSETVPSPGWEAAIDEEVGHLEQDAGSAVQEVEDDASSEL
SAMVVPYPELAPVVFFCLKQTTCPRSWCIRLVASPWFERVSMMVILLNCVTLGMYQPCEN
IDCSSQRCQILQAFDAIIYIFFAVEMVVKMVALGIFGRRCYLGDTWNRLDFFIVMAGVVE
YSLDLQNINLTAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFG
IIGVQLWAGLLRNRCYPDKNFTLSTGMALPAPYYSPDEEDERPFICSLPQDNGIMSCNDV
PARREGGRECCLDVEDALHLQTLGLTADPLLNASMGIVPGLCVNWNRYYTQCRTGYSNPH
KGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCL
VVIATQFSETKQREHQLMQEQRARCLSSSTLASLAEPGDCYEELFQLTCHVLRKARRRCA
AFFRALRQCLCQATPIQSQTNVNGRERSQRQHQGEMEMWMRSHCPHHAKPDHTPPEGSDV
LTSPSISEDCPHCVALSLRDGAGPAGTTANQEAEKGTVEDTDGQAGQSREQKEEKVCKGK
CQELWMETRIKLWGIVESKYFNRGIMIAILINTISMGIEHHEQPEELTNVLEICNIVFTS
MFALEMILKLTAFGCFNYLHNPYNIFDGIIVIISVCEIVGQSDGGLSVLRTFRLLRVLKL
VRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTDAGDTVPDR
KNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPLAALYFVALMTFGNYVLFNLLVAIL
VEGFQAEGDANRSYSDDDGSSSNYDGSERHKDSLQLSDPKLCALTPNGHLEMNPIRGGRI
NLEEECRKSSVTSLGKSSLEQRSFSLRHGRSSLYRQWGRPHPQSAWSRRSSWNSVGRATR
GLAVGGSLRVRGPHSHPTERESLLSPRPQLSHHPPLLSRRYPLRRDRRALSLELPEQLQL
PGPPLQHPLLTRKKSVCGEQHHDCNGKAPVRQRALLSEVYPQLNAQKDKPHLDEETDYSL
CFRIQKMIEVYRPDWCETREDWSVYLFSPENKFRLTCQKIIAHKLFDYVVLAFIFLNCIT
VALERPKIHQGSLERVFLTISNYIFTAIFVAEMTVKVVSMGLYLGDRAYLRSSWNILDGF
LVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKPIGN
IVLICCAFFIIFGILGVQLFKGKFYYCVGLDVKNITNKSDCLLAQYKWVHHKYNFDNLGQ
ALMSLFVLASKDGWVNIMYHGLDAVGIDQQPVTNNNPWMLLYFISFLLIVSFFVLNMFVG
VVVENFHKCRQHQEVEEAKRREEKRLRRMEKKRRKAQKLPYYAGYCHVRLMIHSLCTSHY
LDLFITLVICINVVTMSLEHYDQPKSLETALKYCNYFFTSTFVVEATLKLIAFGFRRFFK
DRWNQLDLAIVLLSVMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRAL
LDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNADYPCEGMSRHATFENFGMAF
LTLFQVSTGDNWNGIMKDTLRECPSDETYSCNGSLQFISPMYFVSFVLTAQFVLINVVVA
VLMKHLDDSNKEAQEEAEMDAEIELELAQGGLCCLGGLAAAAGPGIGMGTGGGGSGGGGV
GGGGGVGDRPSLECGSRQAAMVGAHVHASQSGYTPPSGGHESHNHRKLYSPAQENLWLDS
VSLLIKDSLEGEMQMIDNLSGSVFHHYSSPAVCRGCRCQPTEIRLAEVEQASLMSEQLSD
KSSSPALPDDLSLDDHSVYQLAIRDIKEKRGSSTCQSLEELQATPAECRGSHPKTRASSM
GSESGAGLPTAGLEKQHESAYQYVPAHNPDGERGGSRSRRDRRTPSPLFHLPAEFFHPAT
AVPQGSLASSMVRAGRAGSRLTSPASWASLRSPGANSRVMGSQPPSHSESSLAVGSSEVS
LQTMLEEGINFSVPPHRDLFLPQPPLCPVPDETLPSSVLSRRLHLDQTSFTLQATRGRQR
SQSSCDSSPSCNRLNSIEPSDDDTGIGGGSSQAFNSEHLSETISSLSLSSLLTPGSLAPP
LAKKCNSTGSLEQGNVLARNKNGRHLHSTDQHQDLSNPWTEETDGRDGEKGIAGFGVKSS
SQTMDTSSRKNR
NT seq
6699 nt
NT seq
+upstream
nt +downstream
nt
atgataactgaggaggagcgtcccacagcagtgggcgtgtcctcccccggagctgattcc
agttcagagacggttccatctcctggatgggaggcagcaattgatgaagaggtgggacat
ctggagcaagatgcggggtctgcggtgcaggaagtggaagatgatgcgagcagtgagctg
agtgctatggtggtgccatatccagagttggcgcccgttgttttcttctgcttgaaacag
acaacgtgcccacggagctggtgcatccgcttggtggccagcccatggtttgaacgagtg
agtatgatggtcattctgttgaactgtgtaaccctgggaatgtaccaaccatgcgagaac
atcgactgctcctcacaacgttgtcagatcctgcaggcatttgatgcaattatttatatc
ttctttgccgtggagatggtggtgaagatggtggctctcggcatctttggccgccgctgt
taccttggtgacacgtggaacagactggacttcttcatcgtcatggcaggggttgtggaa
tactctctggaccttcagaacatcaatcttacggccatcaggacagtcagggttctccga
cctctcaaagccataaacagagtcccaagtatgaggatcctggtaaacctgctcctggac
actctacccatgctgggcaacgtactcctgctctgcttcttcgtcttcttcatcttcggc
atcatcggtgtgcagctgtgggcggggcttctgcgcaaccgctgctatcctgacaaaaat
ttcaccctatcaacaggaatggccctgcctgctccctactactcccctgatgaggaagat
gagcgtcccttcatttgctcactgccccaggataacggaatcatgtcatgcaacgatgtc
ccggcacggcgcgagggaggccgtgagtgttgtttggatgtggaggatgctcttcatcta
cagactctgggcctgacagctgatcccctcctcaatgccagcatgggtattgtgccaggc
ctctgtgtcaactggaaccgctattacacacagtgccgcacaggctactccaacccgcac
aagggtgccattaattttgacaacattggctacgcgtggatcgtgatctttcaggtcata
actctggagggctgggtggagatcatgtactacgtgatggatgcacactccttctacaac
ttcatctacttcatcttgctaatcatagtgggctctttcttcatgattaatctgtgtctg
gtggtcatagccactcagttctcagagaccaaacagcgtgaacaccagctgatgcaggag
cagcgtgcccgctgtctgtcctccagcacattggcatcgctggcagaaccgggggattgt
tatgaggaactcttccagctcacctgtcacgtgctgcgtaaagcccgtcgccgctgtgct
gccttcttcagggcactgagacagtgcctgtgccaggccacacctattcagtcacaaacc
aacgtcaatggcagagaaaggagtcagaggcaacatcagggtgagatggaaatgtggatg
aggtcccactgcccccatcacgcaaagcctgaccatactcctcctgaaggttctgatgtt
ttaacttcaccgtccatctctgaagactgtcctcactgtgtggccctgtctctcagagat
ggtgcgggacctgcagggacgacagccaatcaggaggcagagaaggggacggtggaggac
acagatgggcaggctggtcaatcaagagagcagaaggaagaaaaggtgtgtaaagggaaa
tgtcaagagctgtggatggagacgaggattaaactgtggggaatcgtcgagagcaaatac
ttcaaccgaggcatcatgattgccattctcatcaatacgatcagcatgggcatcgaacat
catgagcagccagaggagctgactaacgttctggagatttgcaacatcgtcttcaccagc
atgttcgccctggagatgatcctgaagctgactgccttcggatgtttcaactacctgcac
aacccgtacaacattttcgacggcatcatcgttatcatcagtgtgtgcgagattgttgga
cagtccgacggtggtctgagcgtgttgaggacgttcaggctgctccgcgtgttaaagctg
gtgcgtttcatgcccgctctgcgccggcagctggtcgtcctgatgaaaaccatggacaac
gtggccacgttttgcatgctgctcatgctcttcatcttcatcttcagtatcttgggcatg
cacatattcggctgtaagttcagtctgaagacagacgctggagacacggtcccggacagg
aaaaactttgactctctactgtgggccatagtgactgtttttcagatcctgactcaggaa
gactggaacgtggtgttgtataacggcatggcctccacctctcctctggcagctctctat
ttcgtggctctcatgacttttggaaactatgtgctttttaacctacttgtcgccatcctg
gtagagggatttcaggcagagggtgatgctaatcgctcatattcagatgatgatgggtcg
tcctccaactatgatgggagtgagagacacaaggactcactccagctctctgatcctaaa
ctttgtgctttgacccctaatggacacctggagatgaaccccatcagaggaggaaggatc
aatttggaagaggaatgccgtaagagcagtgtcaccagtctgggcaagagcagcttggag
caacgatctttctcactgcgtcatggccgtagttccttgtatcgccaatgggggcgcccc
caccctcagtcagcatggagccgccgctcaagctggaacagcgtggggcgtgcaactcgg
ggcctggcggtaggggggagcctacgggtccgaggtccccactcccacccaactgagcga
gagtccctcctctccccacgcccccaactctcacatcacccacctctcctttctcgtcgt
tatccccttcgccgggatcggcgtgccctctcacttgagctcccggagcagctccagctc
cctggacccccactgcagcacccccttttgaccaggaagaaaagtgtgtgtggggagcag
caccatgactgtaatgggaaagcaccagtgcgtcagagagcactgctcagtgaggtttat
ccccaactcaatgctcagaaagacaaaccacacctcgacgaggagacagactatagccta
tgttttcggatacagaagatgattgaggtgtatcgcccagactggtgcgagacaagggaa
gactggtctgtctacttgttttcccctgagaacaagttcaggttaacttgccagaagatc
atcgctcataaattgtttgactatgttgtgttggccttcatcttcctcaactgcatcaca
gtggcccttgaaaggcccaagattcaccagggcagtctggaacgagtctttctcaccatc
tctaactacatcttcactgccatcttcgtagccgagatgacggtcaaggtggtttcaatg
ggcttatatctgggagatcgtgcgtacctgcgcagcagttggaacattctggatggtttc
cttgtctttgtgtctctgattgacattgtcgtgtcgatggcaggaggggccaagatcctg
ggtgtgctgcgtgtccttcggctactaagaaccctgcgccccctcagggtgatcagccgg
gctcctggactgaagctggtggtcgagactctcatcacgtctctcaagcccataggaaac
attgtcctcatttgctgtgcgttcttcatcatctttggcatcctcggggtacagctcttc
aaagggaagttctattattgtgttggcctggatgtcaagaatatcaccaataagtctgac
tgtctgttggctcaatacaaatgggttcatcacaagtataattttgacaacctggggcag
gctctgatgtctctgtttgttttggcctcgaaagatggctgggttaatataatgtaccat
ggactcgacgcagtgggaatagaccaacagccggtgaccaacaacaacccgtggatgctg
ctgtacttcatctcgttcctcctcattgtcagtttctttgtgctgaacatgttcgtcggc
gtggtggtggagaactttcacaagtgccggcagcaccaggaggtcgaagaagccaaaagg
agggaggagaagaggctcaggagaatggagaagaagagacggaaggctcagaagttgccc
tactatgccgggtattgccacgtccgcttgatgatccactcgttgtgcaccagccactac
ctggacctcttcatcaccctcgtcatttgcatcaacgtcgtcaccatgtcgctggagcac
tacgaccaaccaaaatctctcgaaaccgctctgaagtactgtaattacttcttcacctcc
accttcgtggttgaggccacgctcaagctcatcgccttcggcttccgccgctttttcaaa
gacaggtggaatcaactggacctggctattgtgcttttgtctgtgatgggcatcactctg
gaggagatcgagattaatgcttcccttcctatcaaccccaccataattcggatcatgcgg
gtgttacggatcgcccgtgtgttgaaactgttgaagatggccactgggatgcgtgctttg
ctagacacggtagttcaggctttacctcaggtggggaatctgggtctgctgtttatgctg
ctgttcttcatctatgctgctctgggcgtagagctattcggcgaactggtgtgcaatgca
gattacccatgtgaggggatgagtcggcacgccacctttgagaactttggcatggccttc
ctgacactcttccaggtctcaactggtgacaactggaatgggataatgaaggacacttta
cgtgagtgcccatcagacgaaacgtactcctgcaatggcagtctgcagttcatctccccc
atgtattttgtgagttttgtgctgacagcccagtttgtgctcatcaatgtggtagttgct
gtgctaatgaagcacctggacgactcgaacaaagaggcgcaggaggaggcggagatggac
gccgaaatcgagctcgagttggctcagggagggctctgctgcctgggtgggctggcagct
gctgctgggcctggcatcgggatgggaactggaggtggaggaagtggtggaggtggagta
ggtggaggtggaggtgtaggagacaggccaagtcttgagtgtggaagcagacaggcagcc
atggtgggggcccacgtgcatgccagccaaagtgggtacacacctccaagtggaggacat
gaatcacacaaccacaggaagctctactcacctgcgcaggagaacctgtggctggacagt
gtctctctgctgattaaggactctctggagggtgagatgcagatgattgataacctgtca
ggatctgtgtttcatcactactcatcccctgcggtgtgcagaggctgcaggtgccagccg
acagagatccgattggctgaggtggagcaggcctctctgatgtcagagcagctctcggac
aagtcgtcctctccagcacttcctgatgacctcagtctcgatgaccacagtgtgtaccag
ctagctatcagagacatcaaggagaagagaggaagcagtacctgtcagagcttagaagag
cttcaggccacaccggcagagtgcagggggtctcatcccaagactcgagcttccagcatg
gggagtgagagtggggccgggcttcctactgcaggccttgaaaagcaacatgaatcagca
tatcagtatgtgccagctcataatccagatggtgagcgaggcggcagtcgcagcagaagg
gacaggaggacgccctctcctctctttcatctccctgcagagttcttccacccagccaca
gctgtgccccaaggaagcctagcttcgagtatggtacgggcaggacgagccggatccagg
ctcacttcaccagcctcatgggcatcgcttcggtcacctggagccaacagcagggtcatg
ggctcacagccaccatcccacagtgagtcatcattagctgtgggaagctccgaagtcagc
ctgcagaccatgctggaggaaggtatcaacttcagcgtacctcctcatcgagacctgttt
ttacctcagcctccgctttgccctgtacccgatgaaaccctcccttcttcagttctcagc
cggaggctgcaccttgaccaaaccagcttcaccctccaggccaccagggggcgtcagagg
agtcagagcagctgtgatagcagccccagctgcaacaggctgaactccatagaaccttcg
gacgacgacacagggatcgggggaggatcgagtcaagcgttcaacagcgaacatttatca
gagactatcagcagcctttccttaagctcgttgcttacacctggctcactggcaccacca
ctggccaaaaagtgcaacagcaccgggagcttagaacaaggaaatgtgttggcgcgaaat
aaaaacggaaggcaccttcatagcacagaccaacatcaggacctttcgaacccatggaca
gaagagacagacggacgggatggggagaaagggattgcaggtttcggggtcaaaagctcc
agtcaaacaatggacaccagctctcggaagaacagatga
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integrated database retrieval system
