Neoarius graeffei (lesser salmon catfish): 132884870
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Entry
132884870 CDS
T10798
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132884870
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
132884870
Chromatin remodeling factors
BAF complex
132884870
PBAF complex
132884870
GBAF(ncBAF) complex
132884870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132884870
NCBI-ProteinID:
XP_060774874
LinkDB
All DBs
Position
4:complement(13806761..13880312)
Genome browser
AA seq
1611 aa
AA seq
DB search
MSTPDPPLGPSPGPGPSPGPMMGPGPSPGSSHGMMGPSPGPSTTSGHAVPQQGTAGYTQQ
DSMHPMHKSLEGLHDKNVGEESRFGQMKGVSMRAGGHAGMGPPPSPMDQHSQGYPSPLGS
SDHVSSPLPAGAPPTSGPLLSSSCTSSSPLEGADSQPSRSGAQSNAAGSSTNPTPFNQNQ
LHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQGQTMPSLPPGGGGGPGTGPGP
LGPNYSRGHVLSGPSVPPSGPNAVPPANGPPKTWPEGPMVNAATPSNAPQKLIPPQPTGR
PSPVPPSVPPAASPVMPPQTQSPVHPGHSAQPAPTIPLHQKHNRITPMQKPCGLDPVEIL
QEREYRLEARITHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRD
AALETALDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFK
EYHRSITGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKD
KRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGQPLALGPDGEPL
DETSQMSDLPVKVIHVDSGKILSGVDAPKAGQLDTWLEMNPGYEVAPRSDSEDTGSEEEE
EEEEEQPQPSQAPVEEKKKIPDPDSEDVSEVDARHIIEHAKQDVDDEYGGAAFTRGLQSY
YSVAHAVTEKVDRQSSLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIA
LITYLMEYKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSG
KFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTG
TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV
LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG
TKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPK
LRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPESQYFI
FLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE
EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQ
MIARSEEEFDHFMRMDLDRRREEARNPKRRPRLMEEDELPTWIMKDDAEVERLTCEEEAE
KMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLDEIEEEVRHKKTTRKRKRDRDLDAGPS
TSGTRGARDKDEDSKRQKKRGRPPAEKITPNPPSLTKKMKKIVEAVIKYKESSNGRQLSE
VFIQLPSRKELPEYYELIRRPVDFRKIKERIRSHRYRSLNDLERDVMLLCQNAQTFNLEG
SLIYEDSIVLQSVFTSLRQKIEKEEESDGEESEEEEEEQDEGSESESRSVKVKIKLGRKE
RSAERGKGRRRGGRTRAKPVVSDDDTEDEREEENQLPGNSRVYFEHLPRVS
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccagaccctccgttagggccttcccctggacccgggccttctcctgggcca
atgatggggcctggaccctcacctggatcctcccatggcatgatgggtccaagccctgga
ccctccactacatccggtcacgctgtccctcagcaaggaacagctggatacacacagcag
gacagtatgcaccccatgcacaaatctctggagggtctgcatgacaagaacgttggagag
gaatctcgctttggtcagatgaaaggtgtgtccatgagagcaggtggacatgctggcatg
ggacctccacccagtcctatggaccagcactcccaaggttacccttctccattgggctcc
tcggatcacgtctccagtcctcttccagccggtgcccctcctacctccgggcctctcctt
tcctcttcctgcacctcctccagtccactcgagggcgctgattcccagccgagccgctct
ggcgctcagagtaatgcagccggatcgtccaccaatccaacgccctttaaccaaaaccag
ctgcaccagcttagggcacaaatcatggcgtataagatgctggcacgtggacagcctctt
ccagaccacctacagatggcagtacaaggcaagaggcccatgccaggcatgcagcaaggc
cagaccatgccaagtctgccacctggtggaggaggagggccaggtacaggtccaggacct
ctgggacccaactatagtcgagggcatgtgttgagtggtcccagtgtgcccccgtctggt
ccgaatgctgttcctcctgccaacgggcctccaaaaacctggcccgagggtcccatggtg
aatgcagccacgccttcgaatgccccacagaagctgattcctccacagcccactggccgc
ccgtctccggtgcccccctctgtgccacctgctgcttccccagtcatgccgcctcagact
cagtctcctgtacacccggggcactcggcccagccggcgcccaccatcccgctgcatcag
aaacacaaccgcatcactcccatgcagaaaccatgcggcctggaccctgtggagatcctg
caggaaagagagtacaggcttgaagcacgtataacacaccgtatccaggagctagagaat
cttccgggctcactcgcaggagatctgcgcacgaaggccaccatcgagctcaaagctctc
cgactgctcaactttcagagacagttgcgtcaagaggtggtggtttgtatgaggcgtgat
gcggctcttgagacggctctggatgcgaaagcttataagcgcagtaagagacaatccctg
agagaggctcgcatcacagagaaactggagaaacagcaaaagatcgaacaggaacgcaaa
cgacggcagaaacaccaggaatatctgaacagcatcctccagcatgccaaagactttaag
gagtaccatcgctccatcactggaaagatccagaagctgaccaaagctgtggccacgtac
catgccaacacagagcgagagcagaagaaagagaatgaacgtattgagaaggagaggatg
aggaggttgatggcagaagatgaagagggctacaggaagctgatcgatcagaagaaggat
aagcggctggcatacctcctgcagcagactgatgagtatgtggccaacctgaccgagctg
gttcgggctcacaaggcagctcaggctctcaaggagaagaagaagaagaagaaaaagaag
aagaagctggagaatgcagagggccagccgctagctttgggaccagacggagagccgctg
gacgagacgagtcagatgagcgacctgcctgtgaaggtgatccacgtggacagtgggaag
atcctaagtggagtggatgctcccaaagcgggacagctggatacctggctggagatgaac
cctggatatgaggtggcaccaagatcagacagcgaggacacaggctccgaggaggaagag
gaggaagaggaagagcagccacagccatcacaggctcctgtagaagagaagaagaagatt
ccagatccagacagcgaggatgtatcagaagtggatgctcgtcacatcattgagcatgct
aagcaggatgtagatgatgaatatggtggtgctgcgttcacgcgcggtctgcagtcgtac
tactcggtggctcacgcagtcactgaaaaggtggacagacagtcgtccttgttggtcaac
gggcagctcaaacagtatcagattaaaggtttggagtggctggtgtctctgtacaataat
aatctgaatggaatcctagctgatgagatgggtttaggaaagaccatccagacaatcgca
cttatcacctacctcatggagtacaaacgcctcaacgggccctatctcatcatcgtaccg
ctctcaactctttctaactgggtctatgagtttgacaaatgggccccatctgtagtgaaa
gtctcatacaagggatcccctgcagccagacgggcgtttgttcctcaactccgcagtgga
aaattcaatgttcttctcaccacctacgagtatatcattaaagacaagcaagtactggcg
aagattcgctggaagtatatgatcgtggatgagggccaccggatgaagaaccaccactgt
aagttgactcaggtcctgaacacacactacctggctccaaggcgtgtcctgctgacgggg
acgccactgcaaaacaagctgcccgagctgtgggcgctgctcaacttcctgctgccaacc
atctttaagagctgcagcacattcgagcagtggttcaatgctccgtttgccatgactgga
gagaaggttgacctgaacgaagaggagaccatcctgattattcgccgtctccataaagtg
ctccgccccttcctgttacgaaggttgaagaaggaagtggaagctcagctacctgagaag
gtggagtatgtgataaaatgtgacatgtcagcactgcagagggttctgtacagacacatg
caggccaaaggggttctgctcactgatggatctgaaaaagacaagaagggtaaaggtggc
actaaaactctgatgaacactatcatgcagttgaggaagatctgtaatcatccatacatg
ttccagcagattgaggagtccttttctgagcacttgggtttctctggtggtatagtacaa
ggtcctgacctgtatcgagcttctggaaagtttgaggtgctggaccggatccttcccaaa
ctcagagcgaccaatcacaaagtgctgctcttctgccaaatgacatcactgatgaccatc
atggaggactatttcgcataccgcaactttaaatacctccgtctggatggtaccactaag
gcagaggaccgcggcatgcttctgaagacgtttaatgatcccgagtcgcagtatttcatc
ttcctgctgagcaccagggcagggggtctcggcctcaacctgcagagtgcagacactgtg
gtcatttttgacagtgactggaaccctcaccaggacctgcaggctcaggaccgagctcat
cgtattgggcagcagaatgaggtccgggtgttgcgcttgtgcaccgtgaacagtgtagaa
gagaaaatcctcgctgctgccaagtacaagctcaacgtggaccaaaaggtcatccaagca
ggcatgttcgaccagaaatcatccagtcacgagcgccgcgcattcctccaggccatcttg
gagcatgaggagcaggacgaggaggaggacgaagttccagacgatgaaactgtgaatcag
atgattgcaaggagtgaagaggagtttgatcactttatgcgtatggatttggatcggcgt
cgtgaagaagctcggaacccgaagcgcaggcctcggctcatggaggaagacgagctgccc
acgtggatcatgaaggacgacgctgaggttgagcggctcacctgcgaggaggaggcggag
aaaatgttcggccgcggctcacgccagaggaaggaagtcgactacagcgactcgctcact
gagaagcaatggctcaaggctatagaggaaggcacattggacgagattgaggaggaagtg
cgccacaagaagacgacccgtaagaggaagcgtgatcgtgatctcgatgctggtccatct
acatcagggacacgtggagcgagagacaaagatgaggacagtaagagacagaagaagcgt
ggacgacctccagcagagaagataaccccgaacccacccagcctcaccaagaagatgaag
aagattgtggaagctgttattaaatacaaagaaagcagtaatggccgtcagctgagcgaa
gtcttcatccagctgccatctcggaaagagctccctgagtactatgagctgatccgcaga
cctgtcgacttccgcaagatcaaggagcgtatccgcagccaccgctatcgcagtctgaat
gacctggagagagatgtgatgctgctgtgtcagaatgctcagacctttaacctggagggc
tcgttgatttacgaggactccattgtgctgcagtcagtgttcaccagcctgcgacaaaag
attgagaaggaagaggagagcgatggagaggagagcgaggaagaggaggaggaacaggac
gaaggctcggagtctgagtctcgttcagtgaaggtaaagattaaactgggccgaaaggag
cgcagtgctgaaagagggaaaggcaggaggaggggagggagaaccagagccaaacctgtc
gtcagtgatgatgacaccgaggatgaacgagaagaagagaaccaacttccaggaaattct
cgagtgtattttgaacacttgcccagagtaagctga
DBGET
integrated database retrieval system
