Entry |
|
Symbol |
tgfbrap1
|
Name |
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
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KO |
K20177 | vacuolar protein sorting-associated protein 3 |
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Organism |
ngra Neoarius graeffei (lesser salmon catfish)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ngra00001]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132884928 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:ngra04131]
132884928 (tgfbrap1)
Membrane trafficking [BR:ngra04131]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132884928 (tgfbrap1)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
4:complement(21418017..21475165)
|
AA seq |
867 aa
MSVKAFELVPAVEREQLAGEKLRIGVECIECCGQHLYVGTNDGFIHHFLLEERTTAKGQL
SFSSQKLLHKQLGLKKPPSELKAASALERLIVLCDGVILLVDMVTLEPVVSGGTKLKSVT
VFCVNENPVTAEPFCVEMVVASARRRAVHICTVHEDRVQILKEVATPDQPCDLSVDGYFL
CLALPTRYVILNYGSGASQDLFPYDSEERKPIVKRIGREEFLLAAPGGLGMFANAEGISQ
RAPVKWSENVIGAAVCFPYVVALDEGFVTVHSMLDQQLKQTLSFRGGRILQHFEGKVVLA
STKAVYVLVPQPLEQQIQDLLAGHRVEEALTLTEGAQRNIPKDKFQILHKRILQQAGFIQ
FGQLQFSEAKEHFRKGQLDIRELISLCPLLLPASSSFTRCHPPLHEFADLNHLAQGDQEK
VQHCKRFLISYLREVRASESANGFRQDVDTALLKLYAEAGHEGLLELLASDNSCLLADSA
PWLEKHHRYFALGLLYHYHGQDAAALQLWVRVVNGDLQDSTHADLFEYVVNFLSSCKNPD
LVWKYADWALQKDQKLGVRIFTKRPVCKGQTRQLNPDEVITYLQKHNQALILYLEHVVLE
RHLQKEKYHTHLAVLYADRVLTLVSRTSTTEEQLSSARQKLQRLLRESNLYRVQLLLGKL
QDSELLLMERATLHGKLEEHDKALHILVHQLKNSAAAQEYCTWASEAHDHKNRGEIFHQL
LRVYLDPDVPGGPQTVEAVDLLNHHADVFNAPKVLELLPEAWSLPLLRPFLCGAVRASMH
AHRTSQIALGLARAENLQLHHDRLKCRGGPIIVSEKKGCHLCHNTFSEPDCVCLPGGTPV
HTHCATQKLKGSPTKRQIDHAHTSNHT |
NT seq |
2604 nt +upstreamnt +downstreamnt
atgagcgtgaaggccttcgagctggtgcctgctgtggaacgggaacagttggctggcgag
aagctgcgcatcggtgttgagtgcattgaatgctgtggccagcacctgtacgtgggcacc
aacgatggcttcatccatcacttcctgctggaggagcgcaccacagctaaaggacagctg
tccttcagctcgcagaagctcctacacaaacaactaggcctcaaaaagccgccgtctgag
ctgaaagctgcctcggctctggagcgcctcatcgtcttgtgtgatggagtcatcttgctg
gtggatatggtcactctggaaccggtggtatccggagggaccaagcttaaaagcgtgact
gtgttctgtgttaacgagaacccggtgacagccgagcctttctgcgtggagatggtggtg
gcatccgcacggcgccgtgctgtacacatttgcactgtgcatgaggatcgtgtccagatc
ctgaaggaagtggccactcccgatcagccatgcgatctgagcgtggacggttacttcctg
tgcctggcccttcccacacggtatgtgattctgaactatggctcaggggcctcgcaggat
ctattcccctacgacagcgaggagaggaagcccattgtcaaaaggattggcagggaggag
tttctcctggctgcaccaggtggcctcgggatgtttgctaacgctgagggcatctcccag
cgtgctccagtcaagtggtctgagaatgtgattggcgcagccgtatgtttcccatatgtg
gtggctctggacgagggctttgtaacagttcacagcatgctggatcagcagctcaagcag
acgttgtcattcagaggaggacgcatcctgcagcattttgaagggaaagtggtgttggct
tccacaaaggctgtgtatgtgctggtgcctcagcctctggaacaacagatccaggacctg
ttggcaggacatcgcgtggaggaggcactgaccctgactgaaggtgcacagagaaacatt
cctaaagacaagtttcagatattacacaaaagaattctccagcaggcgggattcatccag
tttggccagcttcagttttctgaagctaaagagcattttaggaaggggcagctagacata
cgtgagctgatctcactgtgcccgttgctgctgcctgcctcatcgtcgttcacacggtgc
catccaccactacatgagttcgctgatctgaaccatctggcgcagggtgatcaggagaag
gtgcagcactgcaagcgtttcctcatcagctacttgcgtgaggtgcgtgctagtgaaagt
gccaatggcttcaggcaggacgtggacaccgcactgctgaagctctatgccgaggcgggt
cacgagggcttgctggagctgctggcctctgacaactcttgcctgctggctgacagcgca
ccctggctggagaaacaccacaggtactttgcacttgggctcctgtatcactaccatggc
caggatgctgctgctctacagttgtgggttcgagttgtcaatggggacctccaagactcc
acacatgctgatctgtttgagtatgttgtgaacttcctgagctcctgcaagaacccagat
cttgtatggaagtatgcagactgggccttacaaaaggaccagaagcttggagtccggatc
ttcactaagagaccggtttgtaaagggcagaccaggcagctgaatccagacgaagtgatc
acgtacctacagaagcacaaccaggctctaattctgtacctggaacatgtggttctagag
aggcatttacagaaagagaagtaccacacacacctagctgtgctgtatgccgaccgagtg
ctcactctggtctctcgaacttcaaccacagaggagcagctctcttcagcccgacagaaa
ctgcagagattgctgagggagtccaacctgtatagagtccagctgctactaggtaaactg
caggactctgagctgctgctaatggagagagcgacactacatggcaagctggaggagcac
gataaagcactacatatcttggtgcaccagctgaagaactctgcagctgcacaggaatat
tgcacatgggcatctgaggctcatgatcacaaaaaccgcggggaaattttccatcagctg
ctacgtgtttatttggacccggatgtgcctggagggccacagactgtggaagctgtagac
ttgctgaaccaccatgctgatgtttttaatgctccaaaggttttggaacttctccctgag
gcatggtctctgccattgctccgccccttcctgtgcggggctgtgagggccagcatgcac
gctcaccgcacctcccagattgcactggggcttgcgagagcggagaacctgcagctgcac
catgacaggctgaagtgtcgaggaggtccaatcattgtgtcggaaaaaaagggatgccac
ctgtgccacaacactttcagcgagccagactgtgtgtgcctgcccggtggcacacctgtt
cacacacactgtgccacccagaaacttaagggttcgcccacaaagcgacaaatagaccac
gcccacaccagcaatcacacatga |