Neoarius graeffei (lesser salmon catfish): 132884962
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Entry
132884962 CDS
T10798
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngra01002
]
132884962
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132884962
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132884962
Peptidases and inhibitors [BR:
ngra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132884962
Ubiquitin system [BR:
ngra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132884962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
132884962
NCBI-ProteinID:
XP_060775077
LinkDB
All DBs
Position
4:complement(28878404..29167743)
Genome browser
AA seq
2608 aa
AA seq
DB search
MTATTRGSPMGSSDNQGQSQAPDGQSQAPLPQNQVCVRTRKLWCVTPSPNSSNETSPVSP
SEGQGQGDAQQTQEVEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKK
GFDVKCEACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVVKLSQDC
FPLLELLAMATNPYCKFHIYNGTRPSESIPAGPQLADDELFARPPDPRSPKGWLVDLINK
FGTLGGFQILHDRFMSGQTLNVQIIAALIKPFGQCYEFLTLYTVKKFFPVIEMVPQFLES
LTDEELKKEAKNEAKNDALSMIIKSLKNLASRLPGQEETVKNLEIFRLKMILRLLQISSF
NGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQ
YVEKLEKILRFVIKEKALTLEDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDYL
FDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSNDVPVDIMDQA
LSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLS
QTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHLSFDPQTVRVGSRY
SHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDE
PDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLEL
IGLDYLWRVVIQGSDDIANRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYD
TLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSEYHEERTILPMSRAFRGKHITL
VVRFPNQGRQVDDIDIWSHTNDTIGSVRRCILNRIKANSVHTKIELFIGGEAVDPADDRK
LIEQLNLKDKTLITAKLTQVSSHMPSSPDSSSDSSTGSPGNHGNQYSDGPNAEVESCLPG
VIMSLHLRYISFLWQIADLGSTLNMPLLRDGARVLMKLIPPDNTTVENLRAICLDHAKLG
ENSLSPSLDSCFFGPSPSQILYLTEVVYALLMPASGTLGENASVFQYNFLKSGGLPLVLG
MLVRNNFLPNTDMETRRGAYLNALKIGKLLLTAIGFGHVKAVAEACQPVVEGTNPTSPIN
QATHDQALVLQNALQNIPNPASECMLRNVAIRLAQQIFDENFFQASKYIPDISVIRAVQK
IVWASGCGSIQLVFSSNEEISKIYEKTNAGNEPDMEDELLCCEALETMTLCFALMPTALD
TLSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGST
AKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIKDEVKGTGETGMEE
TILEGHLGVTKELLAFQTPEKKFCIGCEKGGANLIKELIDDFIFPASNVFLQYVKTGEFP
AEQAIPVCSSPASINAGFELLVALAVGCVRNLKQIVDTLTEMYYQGCETLTEWEYLPPVG
PRPTKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGAGSDVDDDMSGDEKQDSES
NVDPRDEVFNYHQQFDDKPSLNKAEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWK
QFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPSMLSKVLGGSFADQKICQGCPH
RYECEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKL
PPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLESNEVSAESQVIHQ
NAPFEPHLSGSSRYRLVGVLVHSGQASGGHYYSYIIQRHSNSADGQRDHWYKFDDGDVTE
CKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTVSVDGELLK
HIAEMTLVPKLHHLKMPSAIECGVRKQNVHFMHSRMQYSLEYFQFVKKLLTCNSVYLNPP
PGQEYLLPEAEEIAMISIQLAARFLFTTGFHTKKVVRGPASDWYDALCILLRHSKNVRSW
FAHNVLFAYPTRFSEYLLECPSAEVRGAFSKLTVFIAHFSLQDGPCPAPVTSPGSSTQTC
DNMTLSDHLLRAVLNLLRREVSEHGRHLQQFFNLFVMYANLGLAEKTQLLKLSVPATFML
VALDEGPGPPIKYQYAELGKLYTVVSQLLRCCDVSSRMQSSINGNPALPNPYGDSSLTAP
IMPLQQFVAEILFVRASYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAY
SYTYELRPYLDLLLQILLIEDSWQTHRQGGRTRAFARLAVPNEERSRPAWEADGSPSWKC
GFTMGLMRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCVKCMVALFSNCSVAYQILQ
SNGDLKRKWTWAVEWLGDELERRPYTGNPQYSYNNWSPPVQSNETSNGYFLERSHSARMT
LAKACELCPEEEPDDQEAPDDHESSPPEDTALYPHSPGVQYQQPNNHTHGQPYTGPAAQH
MNNPQHAPQRPQDSWEGTDEVLPVPTKE
NT seq
7827 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacccggggctcccccatggggagcagtgacaaccagggccagagccaa
gccccagatggccagagtcaagcccctctaccccagaaccaggtgtgtgtgcgcacgcgc
aaactgtggtgtgtgacgccttctcccaactcttcgaatgaaacctctccagtgagccca
tcggagggacaagggcagggtgatgctcagcaaacacaggaagtggaggagccagcattc
ccccacacagacctggccaagctggatgatatgatcaaccggcctcgctgggtggttcca
gtcttgccaaagggggaactagaagttttacttgaagctgctatagatctaagtaaaaag
gggtttgatgtgaagtgtgaagcatgtcagaggttttttcgagatggcctgacaatctca
ttcacaaaaattttgacggatgaggcagtgagtggttggaagtttgaaattcatagatgt
atcatcaataacacgcatcggctggtggaactatgtgtggtcaagctgtctcaagattgc
tttccattgcttgagctcctagccatggcaaccaacccctactgcaagtttcacatctat
aatggaacacgcccatctgagagcatacctgctggtccccagcttgctgatgatgaactc
tttgcacgcccaccagatcctcgttcaccaaaaggctggctggtggaccttataaataaa
tttggtacacttggggggttccagatcctgcatgatcgtttcatgagtggccagactctt
aatgtgcagatcatagcagctctcataaagccatttgggcagtgttatgagtttttgacg
ttgtacacagtgaagaagttctttcctgtgatagaaatggttccacagtttttggagagt
ctcacagatgaagaacttaagaaggaagccaagaatgaggctaaaaatgatgctctttct
atgataatcaagtccttgaagaacctagcatcacgattaccaggccaagaagaaacggtc
aagaacttagaaatctttaggttaaaaatgatccttaggttattgcaaatttcttctttt
aatggaaaaatgaatgcactaaatgaagtgaacaaggtgatctctagtgtttcatattac
acccatcgccatggcaacccagaggaagaggagtggctcactgctgaacggatggcggaa
tggattcagcagaataacattctgtctattgttctgagggacagcctgcaccagcctcag
tatgtggagaaattagaaaagatattgcgctttgtaataaaagaaaaggcacttacttta
gaggacctggacaacatctgggctgcacaggctggtaagcatgaggccattgtgaagaat
gtccatgacctgttggctaagctggcctgggatttctcaccagagcagcttgactacctg
tttgactgcttcaaggcaagctggacaaatgcaagtaagaaacagagggagaagctgcta
gaattgattcgccggctggcagaggacgacaaggatggtgtgatggctcataaggtgctt
aatctgctgtggaacctggctcacagcaatgatgttcctgtcgacattatggatcaagcc
ctaagtgcccatattaagattttggactacagttgttcccaggatcgggacacgcagaag
attcagtggatagaccgtttcattgaagaactgcgaaccaatgataagtgggtgatccca
gcattaaaacagatacgggagatctgcagcctgtttggagaggcccctcagaatctcagc
cagacgcaacggagtcctcacgtgttctaccgacatgacttgatcaaccaactgcagcac
aaccatgcactggtcacactggttgcagagaacctgtctgcttacatggagaacatgcga
caattctctaaagagcatctcagttttgatcctcagacagttcgtgtgggcagccgctac
agccatgtgcaagaagtccaggagagactcaattttctgagattcctattgaaagatggg
cagttatggctgtgtgctccgcaagctaagcagatttggaagtgcctggcagagaatgca
gtcttcctttgtgatcgtgaggcttgtttcaaatggtactccaaactcatgggtgatgag
cctgaccttgacccagacatcaacaaggacttctttgagaacaacgtgctgcagctggac
ccctcactactgacagaaaatgggatgaaatgctttgagcgcttctttaaggcagtgaat
tgtcgggagggcaagctagtagctaagcgcagggcatacatgatggatgatctggagctc
attggccttgactacctctggagggttgtgattcaaggaagtgatgacattgccaatcgg
gcaatagatctactgaaagagatttacacaaaccttggaccaaaattacaagtcaatcag
gtagagatccatgaagacttcatccagtcttgttttgaccgcctgaaggcctcgtatgat
accctttgcgtgctggatggggataaggacagcataaattgtgctcgacaggaggctatt
cgtatggttagagtgttgactgtgcttaaagagtatattaatgaatgtgacagtgaatac
catgaggagagaaccattcttcccatgtccagggcatttcgtggaaaacacattaccctg
gtggtgcgatttcctaaccaaggtcggcaggtggatgacattgacatctggtctcatact
aatgacaccattggctcagtacgtcgctgcatcctgaaccgcatcaaagccaacagtgta
cataccaaaattgagcttttcattggcggagaagctgtggacccagctgatgaccgcaag
ctaatagaacagctcaatcttaaagacaaaactctaatcactgcgaagttgacccaagtc
agctcccacatgccctccagtcctgacagctcctctgactcatccacgggctcacctgga
aaccatggcaaccagtacagtgatgggcccaatgcagaggtggagagctgcctcccagga
gtgattatgtcactgcacctacggtatatttcattcctgtggcagattgctgatttgggc
tccacattaaacatgcctttactacgggatggagccagggtccttatgaagctcatacct
ccagacaacactacagtggagaatctgcgtgcaatctgtttggatcatgctaagctggga
gagaacagtctcagtcccagcttagattcttgcttctttggcccctcaccttcacaaatt
ctctatcttactgaggttgtgtatgcccttcttatgccagccagtggcactctgggtgaa
aatgccagtgttttccaatacaacttccttaaaagtggtggtctcccattggtactgggc
atgctcgtcaggaataacttcctacccaacaccgacatggagacgcgtcgtggtgcctac
ctaaatgctctgaaaattggcaagctgctgctcactgccattgggttcgggcatgttaaa
gcagtggcagaggcttgccagcctgtggtggagggcaccaaccctacatcaccaataaat
caggcaactcatgaccaggccttggtgcttcagaatgctctccagaacatccctaatcct
gcctcagaatgcatgttgcgcaatgtggctatccgactggcccagcagatctttgatgag
aatttcttccaggcatcaaagtacattccagacatcagtgtgatacgagcagtgcagaaa
attgtgtgggcttcaggctgtggaagtattcagctagtcttcagctccaatgaggagatc
agtaagatatatgagaagacgaatgcaggtaatgagccagatatggaggatgagcttcta
tgctgcgaggctctggagaccatgacactttgttttgctctcatgccaacggccctggat
acactcagcaaagagaaggcttggcagaccttcatcatcgacctgctgttgcactgtcag
agcaagtcagtgcgtcagatggctcaggagcagtttttccttatggccaccagatgttgt
atgggccatcgacccctccttttcttcatcaccctcctgttcactgttctgggaagcact
gcaaaggaaagggcaaagcatgctggtgattatttcaccctcttgaggcacttacttaac
tatgcatacaatagcaacataaacctgcctaatgcagaagtcctgcttaacaacgaaatt
gactggttgaaaagaatcaaggatgaagtaaagggaacaggagagactggcatggaagag
accattcttgaaggtcacctgggagtcaccaaggagcttttagccttccagacacctgag
aaaaaattctgcattggctgtgaaaagggtggggccaaccttattaaggagctgatagat
gatttcatcttcccagcatctaatgtattcctacaatatgtcaagactggagagttccct
gctgagcaggcaatcccagtttgcagcagtcctgcctccattaatgctggctttgaactg
cttgtggcccttgctgtgggatgtgtacgcaatctgaagcagattgttgacactctgact
gaaatgtactaccaaggctgtgagactcttacagagtgggaatacctcccacctgtgggg
ccgcgacccactaaaggatttgtaggtctgaagaatgctggagccacatgctatatgaac
tctgtgatccagcagttgtatatgattccctctatccgaaatggcattctagccatagag
ggtgctggcagtgatgtggatgatgatatgtctggagatgaaaagcaggacagtgagagt
aatgtggatcccagggatgaagtgttcaattatcaccagcaatttgatgacaagccttct
ctcaataaggctgaagatcgcaaggagtacaatattggagtgctgcgccacctgcaagtc
atatttggccaccttgctgcatcccggctacagtactatgtacctagaggattctggaaa
cagttcaggttatggggggagccagtcaatctgagggaacagcatgatgctctagagttt
tttaactcgctagtagacagcctggatgaagcactgaaggcccttggccatcccagcatg
ctgagcaaagtcctgggtggctcatttgcagaccagaaaatctgccagggctgtccccac
agatatgagtgtgaagaatccttcacaacactgaatgtagatatcagaaaccatcaaaac
ctcctggattccttggaacagtatgtcaaaggagacctgctagaaggagccaatgcttat
cattgtgaaaagtgcaacaagaaggttgataccgtgaaacgtctcctgattaagaagctt
cctccagtactggccattcagctcaagcgttttgactatgattgggagcgtgagtgtgcc
ataaagtttaatgattactttgagtttccacgtgagttggacatggaaccatacactgta
gcaggagtggccaagctagagagcaatgaggtttctgcagagagtcaagtcatccaccag
aatgcacccttcgagccacatttgagcggaagctcccgttaccggttagtaggagtgctg
gtgcactcagggcaggccagcggtggacattactactcctacattatccaacggcacagc
aatagtgctgatggccagcgagatcactggtacaagtttgatgatggtgatgtcactgag
tgcaagatggatgatgatgaggagatgaagaaccagtgctttggtggagagtacatgggt
gaggtatttgaccacatgatgaagcgcatgtcataccggcggcaaaagcgctggtggaac
gcctacatcctgttctatgagcgcatggacacagtcagcgttgatggcgagctgttgaag
cacatagcagagatgacactggtgccaaagcttcaccatctcaagatgccctcggccatc
gagtgtggtgtacgcaagcaaaatgtgcatttcatgcacagccgcatgcagtacagcctt
gagtatttccagtttgtcaaaaagctgctcacctgcaatagcgtctacctgaacccaccc
ccaggtcaagaatacctactacccgaagctgaagaaatagctatgataagtattcagctt
gctgctagattcctgttcactacaggattccataccaaaaaagtagtcagaggccctgct
agtgactggtatgatgccttgtgcatcctactgcgtcacagtaagaacgtccgcagctgg
tttgcacacaatgtcttgtttgcataccccacgcgcttctctgaatatctgctggagtgc
ccaagtgccgaggttcgtggagccttctccaaacttacagtcttcattgcacacttttca
ctgcaggatggcccatgccctgccccagtcacttcaccaggctcctccacacagacctgt
gacaatatgaccctgagtgatcacctcttgcgggctgtgcttaacctgctgaggagggag
gtatctgagcatgggcgacatctacagcagttcttcaacctttttgtcatgtatgccaat
ctcggtttagcagaaaagacacaactgctgaagttgagtgtgccagcgactttcatgctg
gtggctttggatgagggtcctggcccccctattaagtaccagtatgcggagctgggcaag
ctttatacagtagtgtctcagctgctgagatgttgtgatgtatcatcgcgtatgcagtcc
tcaattaatggtaatccagctctaccgaacccatatggtgactccagcctgactgctccc
attatgcctctacaacaatttgtggcagagatactgtttgtacgtgccagctacgtgaag
aaaatcattgaggactgcagtaactctgaggagacggttaaactcctgcgattctgctgc
tgggagaaccctcagttctcatccactgtgctcagtgagcttctctggcaggtggcatac
tcctatacctatgagctgaggccctatctggacctgctactccagatcctgttgattgaa
gactcatggcagacacacagacagggcggacggaccagggcattcgcccgcctggccgtg
cccaacgaggagcgctctcggccggcttgggaggcagacggcagcccctcctggaagtgt
ggttttaccatgggcctcatgcgaatacacaatgtgctaaaggggattcctgatgaccga
gatggattgtttgataccatccagcgttccaagaatcactaccagaagagggcttatcag
tgtgttaagtgcatggtagctctcttcagcaattgctctgtagcctaccagatcctccag
agtaatggtgacttgaaaaggaaatggacatgggcagtggagtggttgggcgatgagctg
gagagaaggccatatacaggaaacccacagtacagttacaacaactggtctcccccggta
cagagtaatgaaacctctaatggctacttcctggaacgatcacacagtgctagaatgact
ctggccaaagcatgtgaactctgtcctgaggaggagcctgatgaccaggaagctcctgat
gaccatgaatcctcccctccagaggatacagcactctaccctcactcacctggggtacag
tatcagcagccaaacaaccacacccatgggcagccatacacaggcccagctgcccagcac
atgaacaaccctcagcatgccccccagaggcctcaggatagctgggagggcacagacgag
gtgctccctgtcccgacaaaagagtag
DBGET
integrated database retrieval system
