Neoarius graeffei (lesser salmon catfish): 132885088
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Entry
132885088 CDS
T10798
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04340
Hedgehog signaling pathway
Brite
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
132885088 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
132885088
NCBI-ProteinID:
XP_060775371
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All DBs
Position
4:complement(57368796..57451733)
Genome browser
AA seq
1493 aa
AA seq
DB search
MDLKEWHWENLDIHTISTYLICPSAKGPTRLARVLAPMPVVMQPHHRLYHYNNTSQPSKG
LAPSIKSPYSEASPVCGAPPCGQLPQSRAMYNPSFNPGTCMDPYMRPPQGPPPHGMMGHR
GMPPPEGGNGIPYCNQSNPMSAHHGFPHNQSGPDHMGSGDGSRFSTPRSILKLSKKRALS
ISPLSDTSVDLQTVIRTSPNSLVAFVNSRCGQNAASSYGHLSVGALSPSMGYSSSTNYQS
RPQGNMYGTPLGHTPAPCHGPPTRLPPHNPRLHAPPKHGHLKTEPIIGSVMDGINVKGLE
EHSEGDVASPSSTGTQDPLLGLLEGRDDLDKEEKPEPEAIYETNCHWESCSKEFDTQEQL
VHHINNEHIHGEKKEFVCHWKDCSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAY
SRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKR
YTDPSSLRKHVKTVHGPEAHITKKHRGDTGPRPPGSTLTSAGQSSELMIEKEERTREDCK
LLAPENTLKSQPSPGGQSSCSSERSPLGSANNNDSGVEMNLNAAGSLEDLTAVEDGGGTS
VPESNGGVGSGGMGMSAQALKRLENLKIDKLKQIRRQTPPSRGTVNKLPALSASGEMIGM
CGSSPLLSNRRVMELSTPELGGGGMGGIGRMVMPCPPSDRRGSGTSSLSSAYTVSRRSSV
VSSYLSSRRSSEVSQVGTVGHCQSAIGNDVSGDPLPPETSHRTGLCHSTSGLPGLPSLTP
AEQYSLKAKYAAATGGPPPTPLPNMEQPSTPNRRSGFLSEYDGQPLPPFLHQAGTRRHSA
NTEYGTGVIYPHQAPGNNMRRASDPVRSGADPQGLPKVQRFNSLSNMTMMGRRNALQHCG
SDANITRHMYSPRPPSITENVMMEAMAMEPQRNTTEGRDHGSMIQGADRTYMGYQQSQAH
PHTSGQLSPGNEGMGCLNPSYQSQMQGQYHSQHGNIGVGETVGQNEMSNTLLQQAEYSMS
TCQLSPSGPHYSGLGQPSEGAGPWGQNGQLHNPHVGMQAAMQFQDTGMQGQQYSQSLYDP
NTDPNHQRVTIKPEQFHPPMGGSSACQNAKALQQHHQPNTMEVCQQAYAPQTKAQGLISK
SSNTSCDFVHGQIKTQTEHCQQQSQAGSFLHGGSLSLGCAGSVLAEERRSQTPMLQVKEM
MVRNYVQSQQALLWEQQQEQQTANSSVPRKPESMEMGAQPAMMQHSPQDQQLNQNIYHNS
YQGYSNQNVLSPSASSSVPVKEQMDGMQDSSYSHDMMPHPPQGRKPLSQQNSLSQQANGA
YLSSPPNLPVSPGHSTASPRRSVRLPAVHQQQQHTDNFYYSGQIHMHHNMDKSLEPHNGS
CQTQQHLAGIEPSTKAASVAYPQSASMSNTLENLDLENAQIDFASIIEDPDPSSYSPVNQ
VLGNQSSSQASSRLTTPQNSITLPSNLSNMAIGDMTSMLTSLAGENKYLNTLT
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaagaatggcactgggaaaatttggatatacacacaatttcaacatacctc
atatgtccgtcagctaagggtcctacaagactagcaagagtgctggccccaatgccagtg
gtcatgcagcctcaccacaggctgtatcactacaacaacaccagtcaaccaagcaaaggt
ctggcgccatcaataaaatcaccctacagtgaggcgtctcctgtgtgtggggctcccccg
tgtggtcaacttccacaaagcagagcaatgtacaacccgtccttcaatccaggaacctgc
atggatccttacatgcggcctccgcaaggacccccaccccatggcatgatgggacaccgt
ggcatgcccccacctgagggaggtaatggtatcccctactgtaaccaaagtaacccgatg
tcagctcatcatggctttcctcacaaccagtcaggcccagaccacatgggttcaggagat
ggttctcgtttctccactcctcgttccatactgaagttgagcaagaaacgagcactgtcc
atctctcctctctctgatacaagcgtggacctgcagacagtcattcgcacatctcccaac
tctctggtggcatttgttaactctcgctgtgggcaaaatgctgctagttcatatggacac
ctgtctgtgggagctttgagtccatcaatgggttactcaagctcaacaaactaccagtcc
aggcctcaagggaacatgtacggaactccacttggccacacccctgctccctgccatgga
cccccaactcgcctgcctcctcacaacccccgtctgcatgcacctccaaaacatggacac
ctgaagacagaacccatcataggtagtgtgatggatggcattaatgtgaagggtttagaa
gagcattcagaaggagatgtggccagtccatcttctactggaactcaggatcctcttctt
gggcttctggagggcagagatgatttagacaaagaggaaaaaccagagcctgaggccatc
tatgagaccaactgccactgggagagctgcagcaaggagtttgacactcaggaacaactt
gtacatcacatcaataatgagcatatccatggggagaagaaagaatttgtgtgccactgg
aaggactgctctcgtgagcagagaccatttaaagctcaatatatgctggtggtgcatatg
cgtagacacactggcgagaaacctcacaagtgcacttttgagggttgcaacaaagcatac
tctcgtctggagaacctgaaaacacacctgcgctcacacactggtgagaagccatatgta
tgtgagcatgagggatgtaacaaggctttctctaatgcctcagaccgggcaaagcaccag
aacagaacacactccaatgagaagccctatgtgtgcaagattcctggatgtacaaagcgt
tacacagacccaagctccctgcgcaagcatgtaaagacagtccatgggcctgaggctcac
atcactaaaaaacaccgtggtgataccggacctcgaccaccaggttctactctgacctcc
gcaggtcaaagttcagagctgatgatagagaaagaggaaaggacaagagaggactgcaaa
cttctggctcctgaaaatacactgaagtctcagccaagtcctggaggccagtcatcatgc
agtagtgagcgctctccattagggagtgcaaacaacaatgacagtggtgtggagatgaac
ctgaatgcagcaggtagtctggaagacctgacagcagtggaagatggagggggaaccagt
gtgcctgagtcaaatgggggagtgggttctgggggtatgggtatgtctgcacaggccttg
aagaggctggagaacttgaagattgataaactaaagcagatccgcaggcagaccccacca
agccggggtacagtaaataaattaccagcactttcagcatcaggtgagatgatcggcatg
tgtggctcttcccctttgctttctaatcgtcgtgtgatggagctctctaccccagaattg
ggtggaggtggtatgggtggaattggcagaatggttatgccttgcccacccagtgaccgc
cgtggaagtggtaccagtagtttaagctccgcctacactgtgagtcgtcgttcctctgtg
gtttcctcctacttatcaagtcgacgctctagtgaagtatctcaggtgggcacagttgga
cattgccagtctgccattggaaatgatgtgagtggggacccattaccacccgagaccagc
cacagaactggtttgtgccacagcaccagtggattgccaggtctaccaagtcttacccct
gcagagcaatatagtttgaaagctaagtatgcagcagcaactggtggaccaccaccaaca
cccctacccaatatggagcagcctagtacccccaatagacgtagtggtttcttgagtgaa
tatgatggtcagccactcccaccattcctacatcaggctggaaccaggagacacagtgcc
aatactgagtatggaacaggggttatttacccacaccaggctcctggcaacaacatgcga
cgtgccagtgatcctgtgcgctctggagctgacccacaaggactaccgaaagtgcagcgc
tttaacagcctgagtaacatgactatgatgggccgtcgtaatgccttgcagcactgtggg
tctgatgccaacatcaccagacacatgtattcaccacgaccaccaagtattactgagaat
gtgatgatggaggccatggcaatggagcctcagaggaataccacagaaggccgggatcat
ggaagtatgatacaaggtgcagacaggacctacatgggctaccagcagtctcaggcccat
cctcatactagtggccagctttctcctggaaatgaaggcatgggatgcttgaatccatct
taccagtcacagatgcaggggcagtaccacagtcaacatgggaatataggtgttggggaa
actgtgggtcagaatgagatgtcaaacactctcctccagcaagccgagtacagtatgagt
acctgtcagctcagcccatctgggccacactactctggtctgggacaacctagtgaggga
gcaggaccctggggacaaaatggccagctccacaatcctcatgtgggtatgcaagcagct
atgcagttccaagatacaggaatgcagggacaacagtattctcaaagtttgtatgatccc
aacactgatcctaaccatcagagggtcacaatcaaacccgaacagttccatccacccatg
ggaggctccagtgcctgccaaaatgccaaggctcttcaacagcaccaccagcctaatact
atggaggtatgtcagcaagcatatgcaccacaaacaaaagctcaaggtttaatcagcaaa
tcttccaacaccagttgtgactttgtccatggtcagatcaaaactcagactgaacattgt
caacagcaaagccaggctggatcattcctccatggggggagcttgagtcttggttgtgca
ggttctgtgttggctgaggaacggaggtctcagactccaatgttgcaggtgaaggagatg
atggtccgaaactatgtgcaatcacaacaggcactcctttgggagcagcagcaagagcaa
caaacagcaaatagtagtgtccctcggaagccagaaagcatggagatgggagcacagcca
gcaatgatgcagcatagccctcaagatcagcagcttaatcaaaacatctaccataatagt
taccagggctactcaaatcagaatgtcttgagtccctcagcatccagctcagtgccagtc
aaggaacaaatggatggcatgcaggattcctcctatagccatgatatgatgccacatcca
cctcagggtcgaaagcctctgagtcaacagaacagtctatcccagcaggcaaatggagca
tacctaagcagcccccctaacttaccggtaagtcctggtcattctactgccagtcccagg
agaagtgtcaggttaccagctgttcatcaacaacagcaacacactgataatttctattac
tcaggccagattcacatgcaccacaatatggataagtctctggaaccacacaatggatcc
tgccagacccagcagcaccttgctggaatagagccctcaacaaaggctgcttcagtggca
tatccccagtctgcatctatgtcaaatacacttgagaatctggacttggagaatgctcaa
attgactttgcttccatcattgaggatccagatccgtcatcctacagcccagtaaatcaa
gttctgggcaaccagtcatcctcccaggcctcctcccgtcttaccactccacaaaactct
atcacccttccctccaacttatctaacatggccattggagatatgacctccatgctgaca
tctcttgctggggaaaacaagtatttgaatacactaacttaa
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integrated database retrieval system
