Neoarius graeffei (lesser salmon catfish): 132885091
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Entry
132885091 CDS
T10798
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00260
Glycine, serine and threonine metabolism
ngra00630
Glyoxylate and dicarboxylate metabolism
ngra00670
One carbon pool by folate
ngra01100
Metabolic pathways
ngra01200
Carbon metabolism
ngra01230
Biosynthesis of amino acids
ngra01240
Biosynthesis of cofactors
ngra04981
Folate transport and metabolism
Module
ngra_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
132885091 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
132885091 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
132885091 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
132885091 (shmt2)
Enzymes [BR:
ngra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
132885091 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
132885091
NCBI-ProteinID:
XP_060775387
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Position
4:58277747..58410305
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AA seq
499 aa
AA seq
DB search
MMLTLSRRCLIRPLCQRVSSTLRGQHSAAAQAPDHDRLWSGQDSLAQDDPEIWDLLRKEK
DRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEIVDQIELLCQKRAL
AAFDLDPALWGVNVQPYSGSPANFAAYTAVLSPHERIMGLDLPDGGHLTHGYMSDVKRIS
ATSIYFESMPYKLNPKTGLIDYDQMELTAKLFRPRLIIAGTSAYARLIDYARIKKLCMEL
NAYLLADMAHISGLVAAKAVPSPFEHADLVTTTTHKSLRGARAGLIFYRKGVRSVGKKGA
QVMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQANTPMFREYIVQVMKNAKAMADAL
IKKGYTLVSGGTDNHLVLVDLRPQGMDGARAERVLELASITANKNTCPGDKSALTPGGLR
LGAPALTSRQFKETDFERVVDFLDEGFKIALDVKKKTNKLTEFKSFLLEDPETVARIGDL
RSRVEAFARPFPMPGFSDH
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgacactgtcacggagatgtttaatccggcctctgtgccagcgtgtgagctcg
actctgagagggcagcactccgcagcagcacaggcgcctgatcacgatcgactctggagt
ggacaagacagcctggcacaggatgatcctgagatatgggacctgctgcggaaagagaag
gaccgacagtgtcgtgggctcgagctcattgcttcagagaacttctgcagccgtgcagcg
ctcgaggcccaaggctcctgcctcaataataagtattcagaaggatacccaggaaagagg
tattatggcggtgcggagatagtggatcagatcgagctgctgtgtcagaagcgcgctctc
gcagcttttgatctggacccggcactctggggagttaatgttcagccatactcaggctca
ccggctaacttcgccgcctacacggccgtgctcagcccccatgagcgtatcatgggtctc
gacctgcctgatggaggacaccttacgcatggctacatgtctgacgtgaagcgaatctct
gctacttccatctactttgagtcaatgccctacaaactcaatcctaaaaccggtctgata
gactatgaccagatggagctgactgctaagctgtttcggcccaggctgatcatcgctggc
accagtgcttatgcccgcctcatcgactatgctcgcatcaagaagctgtgtatggagtta
aatgcgtacctgctggcagacatggcccacattagtggcctcgtggctgctaaagctgtt
ccctctccatttgagcacgctgacctcgtcaccacaaccacacacaaatccctcagagga
gccagagcagggctcatattctaccgtaagggcgtgcgctctgtgggtaagaaaggggct
caggtgatgtatgaccttgaggacaaggtcaacttctcagtcttcccctctctccaggga
ggtccccacaatcacgctatcgctggggttgctgtggctctgcgacaggccaatacccca
atgtttagagagtatatcgtacaagtgatgaagaatgctaaagccatggctgatgcattg
ataaaaaaaggatacactcttgtgtcaggtgggactgataatcacttggtgctggttgat
ttgagaccacagggaatggatggagcacgtgctgaaagggttttggagctggcctccatt
acagccaataaaaacacttgccccggggacaagagcgcactcacacctggaggcctgcga
ctgggcgccccggctctgacctctcggcagtttaaagagacagacttcgagcgtgttgtg
gacttcctggacgaaggcttcaaaatcgctctggatgtcaagaaaaagacgaataaatta
acggagtttaagagcttcctgctggaggatccggagactgttgcacggatcggtgacctg
cgcagtcgggtggaggcattcgctcggcctttccccatgcctggcttctccgaccactaa
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