Neoarius graeffei (lesser salmon catfish): 132885115
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Entry
132885115 CDS
T10798
Symbol
lrig2
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeats and immunoglobulin-like domains protein 2
KO
K24609
leucine-rich repeats and immunoglobulin-like domains protein 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
ig
Ig_2
LRR_4
LRR_5
LRR_1
V-set
LRR_14
LRR_9
C2-set_2
Ig_5
C2-set_3
C1-set
LRRCT
DHU1_N
CDC4_D
LRRNT
Motif
Other DBs
NCBI-GeneID:
132885115
NCBI-ProteinID:
XP_060775419
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Position
4:complement(61143331..61228133)
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AA seq
988 aa
AA seq
DB search
MAAVRPIPQALLMILLSAAAGSDPCPAPCVCSQTPDGMKLMDCSRKTLSGPPVGVPAWVT
HVSLNYNELSGVPFLGDVTSNITVLSLVYNRIAEVVAEQLLPYSVLESLDLSSNSISELK
AGSFPPMQLKYLNLSNNKIGSLEPDCFNNISSLLVLKMNRNRLSLLPAKVFTLSQLQILE
LKRNKIRVVDSLIFKELKALKSLKMQRNGITKLMDGALFGLADMEELELEHNNLTELNKG
WLYGLHMLRVLRLSHNNIGLIRADAWEFCRRLEDLDLSYNHLSRLEDWAFSSLGLLQSLN
LGENRITHLGXGVFDSLANVRTLDIRNNDISLVIEDMVSLFAGMKKLNTLVLQKNNIRTI
AEKAFEDLKELEHLDLSKNRIISIHPEAFSHLKLKSLNLNTSGLLCDCSLKWLSPWLTDS
LSQQSCTAVCAYPTPLAGRSVSSVPLEEFVCGGFPRPQISGNPRTVVALRGTNVTLNCSA
FSTSDSSMNTTWRKDKEVLSDAQVQNYARYQDQQLIYTSVLHLLNVNFTDEGRYQCVISN
NFSANYSTEAKVTVNEMPSFLKTPMDLTIRAGTVARLECAAEGHPPPQIAWQKDGGINFP
AARERRMHVMPEDDMFFIANVKAEDMGVYSCTAKNEAGSLSANATLTVLETPSFQRPLKD
RTVAHGETAVLQCIAGGSPAPRLNWTKEDGPLLLTERHFFAAANQLLIIVDARSADAGKY
TCIMSNTLGTERGHIYLSVLSSPNCDPAGGGYDPDGWTTVGIVVMVVVCCVVGTSLVWVI
VIYHMRRKSEDYSISNTDEMNLPPDIPSYLSSQGTLSEPQEGYSNSEAGSHQQLMPSLTN
GYAHKGTDGGTAPLVICSDCYDNANIYSRTRDYCHYSYLSEDDALDAQLSRDASREGQHE
DAALHNLITRDPQEPQHHALHHYNSKDVPSRSFWSGVDPHSSELPPGSVTVHKPPTGPSN
GNDHEERTGGLEEASYRTNPQDHNPPNT
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgcggcccatcccccaggccctgctcatgatcctgctgagtgctgctgcg
ggctcggacccgtgtccggcaccctgtgtgtgctcacaaacaccggacgggatgaaactc
atggactgcagtcggaaaacgctgtccggtccccctgtgggagtcccagcatgggtcact
catgtgtctctgaattataatgagctctcgggtgtgccttttcttggagacgttacctcg
aacatcactgtgttgtctctggtttataaccgaatcgctgaagtggtggctgaacagctt
ctgccctattcagtcctggaaagtctggatttgagctccaactccatctcagagctgaag
gccggatcgtttcctcctatgcaactaaaatacctgaatctgagcaacaacaaaatcggc
tctctagaaccggattgctttaacaacatcagctctctgctggtgctgaagatgaacagg
aaccggctatcgctactacccgcgaaagtcttcactctgtctcaactgcaaattctggag
ttgaaacgcaataagatcagagtggtagacagtttgatctttaaagaactgaaggctttg
aagtctctgaagatgcagaggaatggcatcacgaagctgatggatggagctctttttgga
cttgctgatatggaggaattagagctggaacacaataacctgactgagttaaataagggt
tggttatatggcctgcacatgctccgcgtgctccgactcagccacaacaacatcggtctc
atccgagccgacgcctgggagttctgccgacgcctggaagatctagatctatcctataat
cacttgagtcgtctggaggactgggctttctctagccttgggctacttcagagtctaaac
ctgggcgagaatcgcatcacgcacctgggangaggagtttttgacagcctggcaaacgtc
cgcactctagatatccgtaacaacgacatatcccttgttattgaggacatggtcagtttg
tttgcaggcatgaaaaagctcaacacattggtacttcagaagaacaacatcagaaccatc
gcagagaaggcctttgaggatctgaaagaactagagcatctagatttgagtaagaaccgg
atcatctctattcacccagaggcattctctcatttgaaactcaaatcactcaatttgaac
accagcggtctcctctgtgactgcagtctgaagtggctcagcccgtggctcaccgacagc
ctctcccagcagtcctgcaccgctgtgtgtgcatatcccacccctttggcaggcaggagt
gtctctagtgtccccctggaagaatttgtgtgtggtggcttccctcgaccacagattagt
gggaaccccaggaccgtggtggcactgcgcggaaccaacgtcactctcaactgctctgcc
ttcagcactagcgactcttccatgaacaccacgtggaggaaagacaaagaggtgctgtct
gacgcacaggtgcaaaactatgcccgctaccaggaccagcagctcatctacaccagcgtg
ctccatctgcttaatgttaatttcactgatgaaggacgctaccagtgcgtaatctccaac
aactttagcgccaactactccactgaggccaaagtgacggttaatgaaatgccctccttc
ctgaagacacccatggacctgaccattcgggctggcaccgttgcccggttggagtgtgcg
gcagagggacaccctcccccccagattgcctggcagaaggacgggggcatcaatttccct
gctgcccgcgagagaaggatgcacgtcatgcccgaagatgacatgtttttcatcgccaac
gtgaaggcggaggacatgggcgtgtacagttgcactgctaaaaatgaggcgggcagtcta
tcagccaatgccacactcactgtgctggagactccgtcgttccagcgccctctaaaggat
cgtacagtagcacatggtgagactgccgttcttcagtgcatagccggtggtagtcctgct
ccccgcctcaattggacaaaagaagatggtccattgctgcttacggagcgtcactttttt
gcagcagccaatcagctgcttattatcgtggatgccaggtctgcagatgcagggaaatac
acctgcatcatgtccaacacgctgggcacagagcgaggacacatctacctcagcgtcttg
tcctctcccaactgtgatccggctggcggtggatacgacccggacggctggactacagtg
ggcattgtggtgatggtggttgtgtgttgtgtggtgggcacgtcactggtttgggtgata
gtcatctaccacatgagacgcaagagtgaggattacagcatctctaacacggatgagatg
aacctgccaccggacatccccagttacctgtcatcccagggcacgctgtctgagcctcag
gaaggctacagcaactctgaggcgggcagtcatcagcagctcatgccctccctgactaat
ggctatgctcataaaggaactgatggtggcaccgccccattggtcatctgctcagactgt
tacgacaatgccaacatctactctcgcacacgggactactgccactactcatacctgagc
gaagatgatgctctggatgcccagctgtccagagacgcaagcagagaggggcaacatgaa
gatgcagcactgcataacctgatcacccgggaccctcaggagccccagcaccatgcctta
caccattacaatagcaaagatgttccaagcagatcattttggagtggagtagaccctcat
tcctccgagttgcccccaggctcagtgactgtacacaagccaccaacagggccctctaat
gggaacgaccatgaggaaagaacaggagggctagaggaagcctcgtacaggactaaccca
caggatcataaccctccaaacacatag
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