Neoarius graeffei (lesser salmon catfish): 132885154
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Entry
132885154 CDS
T10798
Name
(RefSeq) homeobox protein TGIF2 isoform X1
KO
K19553
homeobox protein TGIF2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132885154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132885154
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
132885154
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
132885154
NCBI-ProteinID:
XP_060775481
LinkDB
All DBs
Position
4:complement(66229177..66238023)
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AA seq
398 aa
AA seq
DB search
MKSVKRVCEEEHSGEMEFSAMSDSDPCEDEAYPLNLSTGARGASAKRRRRGNLPKESVQI
LRSWLYEHRFNAYPSEQEKLSLSGQTNLSISQICNWFINARRRLLPDLLRKDGKDPTQFT
ISRRASKSDSRSVGSASPDHSTPPLVPASRPSVIRPAPTLDLSMLGNTATAILTGAGCLV
GSGLTGQDCGVQTLMQVDTRGLIKKESVNGPPSLTTIPGSSSSSPSLGTMSPTVVLFNTP
PPTPPELCPHDFSDLKLLVDAALQRAAEQENQRQKEQPSTRVPCSVPVSVSAAEALIRKT
EQEKSHENLNSSSKPDSTPSLQEKAVLPVSVPALNASALPASEAGVNLPVGPHRVAGAVN
FQPKDVWSMLRPASPPPTSVSHTWSSQHTLHAVREAVN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgtcaaaagagtgtgtgaagaggagcacagtggagagatggagttttctgcc
atgtcagacagcgatccctgtgaggatgaagcttatccactcaatctttccactggtgcc
cgtggagcttctgctaagcgtcgccgccgggggaacctgcctaaagagtcggttcagatt
ctgaggagctggctatatgagcatcgttttaacgcctatccttctgagcaggagaagctt
agtctgtcaggacagactaatctctccatttcgcagatctgtaactggtttatcaatgca
cggcgacggctgctccctgacctgcttaggaaggatggaaaggacccgactcagttcaca
atctcccgccgtgccagcaaatcagacagccgatcagttgggtctgcctccccagaccac
tctacccctccactggtccctgcatcccgcccctctgtcattcgccctgcccccacattg
gacctgagcatgctaggtaatacagcaactgccatcttgaccggggctggctgtttagtg
gggtcagggttaacaggccaagactgtggtgtccagaccctcatgcaggtggatactcgt
ggcctgatcaagaaagaaagtgtgaatggacctcctagtctaactactattccagggtct
tcttccagcagtccaagcctgggaacgatgagtcctactgtggtgctgttcaacaccccg
ccccctacacccccagagctctgcccacatgacttcagcgacctcaagctgctcgtagat
gcagctctacagagagcagcggagcaagaaaaccagagacagaaggagcaaccttcaact
agagtgccctgttctgttcctgtgtctgtttcagcagcagaagctctcattaggaagaca
gagcaggaaaagagccatgaaaacctcaactccagcagcaaacctgactctactccaagc
ttgcaggagaaggccgttctccccgtctctgtgcctgcgttaaatgcttctgctcttcct
gccagtgaagcaggcgttaacctgccagtaggtccacacagagttgctggagcagtgaat
tttcagccaaaagatgtgtggagcatgctaagaccagcgagtccacctccaaccagtgtc
tcacacacctggagctcacagcacacgctccacgctgtccgagaagcagtcaactga
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