Neoarius graeffei (lesser salmon catfish): 132885437
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Entry
132885437 CDS
T10798
Symbol
col28a2b
Name
(RefSeq) collagen alpha-1(XXVIII) chain isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngra01002
]
132885437 (col28a2b)
Peptidases and inhibitors [BR:
ngra01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
132885437 (col28a2b)
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
DUF1194
Motif
Other DBs
NCBI-GeneID:
132885437
NCBI-ProteinID:
XP_060776086
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All DBs
Position
4:complement(104076442..104200474)
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AA seq
1244 aa
AA seq
DB search
MQLHVSWLVLLLGLQCVWAQQDNYEEDYDEEEEEERNTRRKSKSKLLTSNLKPKNNAQSL
TNEDCNLELAFLLDSSESAKDNHGQEKRFVSEVVERMQNLHLQSGRKLSFRSALLQYSSH
VISEQTFSQWRGVANFKANIAPIPYIGQGTYVTYAITNLTRLYLTESGPGSVRVAVLLYD
GESHPKNPDLFSAVADAKNQGVRFFAIGVTPAARDTSKMTQLRMLASSPPTRYLHNLQDK
DIVKRVIKELTELADEACPMEKRCVCEKGESGPSGPAGKKGRPGDDGSPGPKGQKGERGH
QGLPGQNGSEGKPGRTGEKGDRGECGMPGIKGDRGPEGPVGIRGNRGLQGLPGPNGDTGP
QGPPGQKGERGFPGLPGLQGETGIGIAGPKGEMGLQGRPGPPGPPGLGEPGPPGPQGPQG
VQGEKGPPGEGLPGPKGERGTEGPRGPRGPAGPGIKGHKGDYGPPGPPGPIGFPGIGIQG
EKGTEGPRGAPGFRGPPGEGYPGPKGDQGLPGEVGAPGVSGVGELGPKGEPGAPGLSGLP
GLPGEDGAHGQKGEPGVPGTRGPEGAAGVGTQGEKGDQGQRGIRGLAGPPGITGPSGAKG
EPGTPGRLGLPGLPGRAVVGTKGDVGPPGPPGPLGETGYGLPGPKGDRGDAGPPGPFGPK
GDGYPGLPGPPGLPGLPGEPGPEGLGLPGPKGDIGFRGLPGQPGPPGEGLQGLPGNTGRP
GLPGPPGPPGQGMQGPKGEFGAQGLVGPRGQPGEGFPGSKGDRGAPGDRGQKGVKGDAGD
PGPSGQPGQQGAKGELGLTREDVIRIIREICGCGIKCKERPMELVFVIDSSESVGPENFE
IVKDFVTALVERVTVGNSATRVGLVLYSLEARLEFDLARYATKRDVKHAVRRMTYMGEGT
YTGTAIRKATREAFRSARSGVSKVIVVITDGQTDERDSVKLEIAVREAHAANIEMFALGI
VNASDPAQAEFLRELDLIASDPDSEHVFQIDDFNTLPALESKLVSQFCEDENGDIVNRIN
GNGYSDHVNRISGSLYEFDNNGNRINNGGYYHRNNVNPTHTRTHSGTFTHTSTHSGTHTS
THSGTHTGTHTGTHTVSVSHGGGRGDSLPVLVTPAVPHTTGIHTHNSSEHSNRGDVPSYN
RPSTHGRPSSSSSSSSSTVITSSTSVHYVPAPRPPLPKEIVPLDPRCELVLDQGSCRDYS
IRWYYDHNANACAQFWYGGCHGNRNRFDTEDECKKTCVVPQTGG
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgcagctacatgtgagctggctggtgttgctgctcgggctgcagtgtgtttgggctcag
caggacaattatgaagaagactatgatgaagaagaagaggaagagaggaacaccagaaga
aaatccaagagcaaactgctcacatccaaccttaaaccaaaaaacaacgctcagtcgctc
acgaatgaagactgcaaccttgagctggcatttttgctggacagctctgaaagtgccaaa
gacaaccacggccaggagaagcgctttgtcagtgaagtggtcgagcgcatgcagaaccta
cacctccagagtggacgcaagctgagttttcgatctgcactccttcagtacagcagtcac
gtgatatccgagcagaccttcagccagtggaggggtgtggccaacttcaaagccaacatc
gcacctattccttacatcgggcaagggacatacgtgacgtacgccatcaccaacctcaca
cgcctctatctgaccgaatcaggacctggaagtgtccgagtggctgtgttgctctacgat
ggagagtcccatccaaaaaatccagacttattttctgctgtggctgatgccaagaaccaa
ggggttcgtttttttgctattggtgtcacacctgctgccagagacacatccaaaatgaca
cagctgaggatgctggccagttctccaccaacccgctacttacacaacctgcaggataaa
gacatcgtaaagagggtcattaaagagctgacagagttggcagatgaggcgtgtcctatg
gagaaaaggtgtgtgtgtgagaaaggagagagcggaccaagtgggccagctgggaaaaaa
ggtcgaccaggagatgatggaagtccagggccgaaagggcagaagggtgagagaggacat
caagggttgccagggcaaaacggctctgagggcaaaccgggacgtacaggagaaaaggga
gacagaggtgaatgcgggatgcctggcatcaaaggagacagaggtcctgaaggtccagtg
ggcatcagaggaaacagaggactgcagggtttgcctggacctaacggtgacactggaccc
cagggaccacctggacagaaaggagagaggggctttcctggactaccgggacttcagggt
gaaactggaataggtattgctggaccaaagggtgagatgggacttcagggcagacctgga
cctcctggacctccaggacttggagaacctggcccaccagggcctcaggggccacaggga
gtgcagggagagaaagggcctccaggagagggattacctgggccaaagggagagcgagga
acagagggcccgaggggaccgagaggaccagctggacctggaattaaaggacacaagggt
gactatggacctcctgggccacctggaccgattgggtttcctggaataggtatacaggga
gaaaagggaactgagggaccacgtggtgccccaggattcagaggcccaccaggagaaggt
tatccaggaccgaagggtgatcaaggattaccaggagaagtcggagcaccaggagtgagt
ggagtgggagaactaggaccaaagggtgaaccaggagcgccgggattatcaggtttaccc
gggttacctggagaggatggcgctcatggacaaaagggagagcctggtgttcctggtacg
agagggccggagggagcagcaggtgttggaacacaaggagaaaagggagatcagggccag
agaggaatccgtggattagcaggacctccaggaatcaccggaccatcaggagcaaaaggt
gaaccaggaacaccaggacgtctcggcttaccaggacttccaggacgtgcagtcgttgga
acaaagggtgatgtaggtccaccaggtcctccaggaccactgggggagacaggatatgga
cttccaggaccaaagggtgatcgtggagatgcaggtcctcctggaccatttgggccaaaa
ggagatggctaccctggcctaccgggtccacctggacttcctgggcttcctggagagcct
ggtccagaaggtttgggtctcccaggaccaaagggtgatattgggtttagaggtttgcca
gggcaaccaggaccaccaggagaggggctgcaaggactaccaggcaacacaggaaggccg
ggacttcctggtccaccaggacccccagggcaggggatgcaggggccaaagggtgagttt
ggagctcagggcttggttgggccaaggggacaacctggagagggtttcccagggtcaaag
ggtgatcgtggtgctccaggggataggggccagaaaggagttaaaggtgacgctggggat
ccaggaccatcaggccaaccaggtcaacagggagcgaaaggagagctgggtctgacgaga
gaagacgttataagaataatacgggaaatatgcggatgcgggattaaatgtaaggagcgt
ccaatggagctggtgtttgtgattgacagctcggagagtgttggtcctgagaactttgag
atcgtgaaggactttgtgacagcgctggtagaacgagtgacagtaggaaacagtgccaca
cgagtcggccttgtgctctacagcctggaggctcgattggagtttgacctcgccagatac
gccacgaagcgtgacgttaaacatgccgtgcgcaggatgacctacatgggcgagggcact
tacacgggcacagccatccgcaaagccacacgtgaggccttccgcagcgcccgttccgga
gtcagtaaggttattgtggtcatcacagatggacaaacagatgagcgtgactctgttaag
ctggaaatcgcagtgcgggaggcgcacgctgctaacattgagatgtttgctcttggcatc
gtgaatgccagtgatccagcacaggctgagtttctccgggagcttgatctcatcgcatca
gaccctgatagtgagcacgtctttcaaattgatgactttaacaccctaccagctctggaa
tccaaattggtcagtcagttttgcgaggatgagaatggcgacatcgtcaaccgcattaat
ggcaatggatacagtgaccatgtcaaccgcatcagtggttccctgtatgagtttgataac
aatggaaaccgcatcaacaatggtggatattatcacagaaacaatgtaaacccaacacat
accaggacacactctggtacttttacgcacaccagtactcacagtgggacacataccagt
actcacagtgggacacacactggtactcacactggaacacacactgtctcagtcagtcat
ggaggtggaagaggtgacagtcttccagtacttgtcactccagcggtaccacacacaaca
ggcattcatacacacaacagctcagagcacagcaacaggggagatgttccatcatataac
agaccatctacacatggcagaccttcatcatcatcatcatcatcatcatcaactgtaatc
acgtcatccacttcggtgcattatgtccccgctccacgacctcctttacctaaagaaatt
gtgcccctggaccctcgctgcgagctggtcctggatcagggttcatgtcgtgattacagc
atccgctggtactatgatcacaacgctaatgcatgcgcacagttctggtatggaggttgt
catggcaaccgcaatcgctttgatactgaggacgaatgcaagaagacttgtgtagtccca
caaacaggaggatga
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integrated database retrieval system
