Neoarius graeffei (lesser salmon catfish): 132885444
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Entry
132885444 CDS
T10798
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132885444 (ccdc174)
03041 Spliceosome [BR:
ngra03041
]
132885444 (ccdc174)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132885444 (ccdc174)
Spliceosome [BR:
ngra03041
]
Complex C
Other components
EJC/TREX
132885444 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
132885444
NCBI-ProteinID:
XP_060776101
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All DBs
Position
4:complement(105845061..105881794)
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AA seq
470 aa
AA seq
DB search
MDKKKKQYKVTASSLVDLKAELYRKQEAFRQEKLTQDAGSVAKSHNHTKKPSVWSKQNHG
VTARAEKDVEKTAEEEQNLDKSRQKLEEKARLYEQMTKGDFPDEETESLYLVDFTQKIIE
QKRAAQSREAETGDRDGEGSDTHIPIPPPQSADDEWVDYVDALGRSRKCLRKDLPQFQKM
DQDLQSKQVVGADRTLLSEDMRRELQREQWEREEEEQMKRPVGPVHYENIRDQEARELGV
GYYAFSQDEDQRKKQRETLDMLRDQTAEQRTKRENLKEKRKALLEARLDKVRMRKMKKSK
IDPGAEEEEVAAPDAAVKEEEAEPQDVIGPPPPSETAFKKVEVEIQERKDSRPGMPHVRE
WDRGKEFSWGQWTTRRREERDSEFAPPSSYFGADRRDSRGRSVQEGRGKAQSGFKWSEAH
GGSDQDGTERRTQNTHTPFTNQASFSEPQQTPAHTTHDLDALLSFYKNSV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagaaaaaacaatataaggtcacagcttcgtcgctggttgatctgaaagca
gagctgtacaggaagcaggaggcattcaggcaggagaaactcactcaggatgcgggcagt
gtggccaaatcacacaaccacacaaagaaacccagtgtttggagtaaacagaaccatgga
gtgactgcacgtgctgaaaaggatgtcgagaaaacagcagaggaggaacaaaacttagac
aaatcaaggcagaagctggaggagaaagcacgcctctatgaacagatgactaaaggagat
tttccagatgaggagacggaaagtctgtacctggtggatttcacacagaagataatcgag
cagaagagagcagcacagagcagagaagcggaaactggagacagagatggcgaaggatcg
gacacgcacatccccatcccgcccccacaaagcgctgacgatgaatgggtggactatgtg
gatgcgctgggccgatcaaggaagtgtttaagaaaagatttacctcagtttcagaaaatg
gaccaagatttacagagcaagcaagtggtcggagctgataggacgttgttgtctgaagac
atgaggcgagagctgcagagagagcagtgggagagggaggaagaggagcagatgaagaga
cccgtcggacccgttcactacgaaaacatccgagatcaagaggccagagagctgggtgtt
ggatattacgctttttctcaagatgaagaccagcgcaaaaagcaaagggaaactctggat
atgctgagagatcagactgcagagcagcgcactaagcgagagaatctgaaggagaagcgg
aaagctctgctcgaggctcgactggataaagtgcgaatgaggaagatgaagaaaagcaag
atagatccaggagctgaggaagaagaagttgcagcacctgatgcagctgttaaagaggaa
gaggccgagcctcaggatgtgatcggccctccacctccttctgaaactgcgttcaaaaag
gtggaggttgaaattcaggaaagaaaagactccagacccgggatgccacacgtcagagag
tgggacagaggaaaagagttctcctggggtcagtggaccactcggagacgggaggagagg
gattctgagtttgccccgccctcttcatacttcggagctgacagacgagacagtcgtggc
aggtctgttcaggaagggcggggcaaagcgcaatctggtttcaaatggtccgaggcgcac
gggggatccgatcaggatggcacagaaagacgaactcaaaacacacacacgccttttaca
aaccaggcctcgttctcggagcctcagcaaacgcctgcgcacacgacacacgatctggat
gcccttttatccttctacaaaaactctgtttaa
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