Neoarius graeffei (lesser salmon catfish): 132885469
Help
Entry
132885469 CDS
T10798
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04810
Regulation of actin cytoskeleton
ngra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
132885469 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132885469 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132885469 (cyfip1)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132885469 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
132885469 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
132885469
NCBI-ProteinID:
XP_060776145
LinkDB
All DBs
Position
4:109816687..109876835
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTAVSLEDALSNVDLLEELPLPDQQPCIEPLPSSLIFQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCVDYYENKMYLTPGEKHMLLKVMGFGLYLMDGANSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWSCTSTGSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLCDLALQGLQLLSQWSAQVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQVTLRDPLRQAIKKKKNVIQSVLQAIRKTICDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLVADKSGSKKTLRSGLEGPTILDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILDMKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVLAGS
LLLDKRLRAECKNQGANIPWPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIVELEGLLEINRMTHQLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKALNLAYGS
IYGFYRNFVGPPHIKAVCRLLGYQGIAVVMEELLKVVKSLLQGTILQYVRTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILSRIRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLNWAGCMIITLLGQQRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIRKFQVLNDEIFTILNKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgcggtgtctctggaggatgctctgtccaacgtggacctgctggaggagctt
ccactccctgaccagcagccctgcatcgagcccctgccctcatctctcatcttccagccc
aacttcaacaccaactttgaagatcgcaatgcatttgtgaccggcatcgcacgctacatc
gagcaggccaccgtccactccagcatgaacgagatgttggaggagggccaggagtacgct
gtgatgctctacacatggagaagctgctcccgagccatccctcaggtgaagtgcaatgag
cagcccaacagagtggagatctacgagaagacagtcgaggtgctagagcctgaggtcacc
aagctgatgaacttcatgtatttccagcgtactgcgatcgatcgtttctgtggtgaggtg
cgtcgcctgtgtcacgccgagcgcaggaaggactttgtatccgaggcttacctgctcacc
ctgggaaagttcatcaacatgtttgccgtgctggacgagctgaagaacatgaagtgcagc
gtcaagaacgaccactcggcctacaaacgagccgcgcagttcctgaggaaaatgtcagag
ccatcttctattcaggagtctcagaacttatccatgttcctggccaaccacaacaagatc
acacagtccctccagcagcagttagaagtgattaatggttatgaagagctcctggcagac
atcgtcaacctctgcgtggactactatgagaataagatgtacctcacgcctggcgagaag
cacatgctgctcaaagtcatgggctttgggttgtatctgatggatggagccaacagcaac
atctacaaactggacgctaagaagagaatcaacctcaccaagatcgacaagtttttcaag
cagctgcaggtcgtgcccctgttcggagacatgcagatcgagctgtcccggtacatcaag
accagcgcgcattttgaagaaaacaaatccaggtggtcttgtacatctacaggcagcagt
cctcagtacaatatctgtgagcagatgattcagatccgtgaggatcacatgcgattcatc
tctgaattggctcgctacagcaacagtgaggtggtaacaggatcaggacgccaagaggct
cagaagacagacgccgaatacaggaagttgtgtgacctggccttgcagggccttcagctg
ctctctcagtggagtgctcaagtcatggaagtgtattcatggaagttggtgcatccgaca
gacaaatattccaataaggaatgtcccgacaacgcggaggagtatgaacgcgccaccaga
tacaactacaccagtgaagagaagttcgcgttggtggaggtcattgccatgataaagggg
ctgcaggtgctgatgggtcgtatggaaagtgtgtttaaccacgccatccgccacaccatc
tactccgccctgcaggacttcgcccaggtcacactgcgtgacccgctgcgccaggctatt
aagaagaagaagaatgtcatccagagtgtcctccaggccatccgtaagaccatctgtgac
tgggagacgggacgagagcctcataatgacccagctctgcgaggggaaaaggatcccaaa
ggagggtttgatatcaaagtgccacgtcgcgctgtcggtccttctagcactcagctctac
atggtgaggacgatgctggagtctctggtagcggataagagcggttctaagaagacgctg
cgcagcggtctggaaggaccaaccatcctggacatcgagaagttccaccgcgaatccttc
ttttacactcacctgctcaacttcagcgagaccctgcagcagtgctgtgatctgtcccag
ctgtggttccgcgagttcttcctggagctcaccatgggccgtcgtatccagttccccatt
gagatgtccatgccctggatcctcaccgatcacatcctggacatgaaagaagcctccatg
atggagtacgtgctgtatcctctggacctgtacaatgacagcgcacactacgctctcacc
aagttcaagaagcagttcctctatgacgagatcgaggctgaggtgaatctgtgctttgac
cagtttgtctacaagcttgctgatcaaatttttgcctactacaaggttttggcaggaagt
ttgcttctggataagagacttcgggcagaatgtaaaaaccagggtgccaatattccatgg
cctccctccaaccgctacgagacgctgctgaagcagagacacgtccagctcttgggtcgt
tccattgacctgaatcgtctcattactcagcgagtctctgctgctctctacaagtccctt
gagctggccattaaccgcttcgagagcgaggacctcacctccatcgtggagttggagggt
ttgttggagatcaaccgaatgacccaccagctgctgagtaagtttctgactctggacagc
atggacgccatgttccgcgaggccaaccacaacgtctccgctccgtacggcagaatcacg
ctgcacgtcttctgggagctcaactacgacttcctgcccaactactgctacaacggctcc
accaacaggtttgttcgtacagtgctgccgttctcacaggagttccagagagacaaacca
cccaacgctcagcctcagtacctctatgggtcaaaggcattgaacttggcatacggtagt
atatatggcttctaccggaactttgtgggtcctccccatatcaaggccgtgtgcagactg
ctggggtaccagggcatcgccgtggtgatggaggagctcctgaaggtggtcaagagcctg
ctccagggcaccattctgcagtatgtgaggactctgatggaggtgatgccaaagatctgc
cgtctcccacgccacgagtacggctctccagggatcctggagttcttccaccaccagctg
aaggacatagtggagtacgctgagctgaagaccgtgtgcttccagaacctgagggaggtg
gggaacgctgtgctcttctgtctgctcagcgaacagagcctgtctcaggaggaagtgtgt
gacctgctgcatgctgcaccattccagaacattctccccagggttcatgtgaaagagggc
gagcggttggatgctaagatgaagcggttggaggccaaatatactgcgctgcacatggtg
cctttaatcgagcgtctggggactccacagcaaattgccatcgctcgtgagggcgacctg
ctgaccaaagagaggctgtgctgtggactgtccatgttcgaggtcatcttgtcacgcatc
cgcggtttcctggacgacccgatatggcgcggcccgttaccgagcaacggtgtgatgcac
gtggatgagtgtgtggagtttcacaggctgtggagcgccatgcagtttgtgtactgtatc
cctgtcggagcgcatgagttcaccgtggagcagtgttttggtgatgggctgaactgggcc
ggctgcatgatcatcaccctgctggggcagcagagacgcttcgacatcctggacttcagc
taccacctgctcaaggtgcagaaacacgacggcaaggacgagatcataaagagcgtgcca
ttaaagaaaatggtggaccgcattcgcaagttccaggttctgaacgacgagatcttcacc
attctcaacaagtacctgaaatccggggacggggagaacatgccagtggaacatgtgcga
tgcttccagccacccatccaccaatccctggccagcaactga
DBGET
integrated database retrieval system
