| Entry |
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| Symbol |
smarcc2
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| Name |
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
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| KO |
| K11649 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C |
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| Organism |
ngra Neoarius graeffei (lesser salmon catfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ngra00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132885524 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ngra03021]
132885524 (smarcc2)
03036 Chromosome and associated proteins [BR:ngra03036]
132885524 (smarcc2)
Transcription machinery [BR:ngra03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132885524 (smarcc2)
Chromosome and associated proteins [BR:ngra03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132885524 (smarcc2)
PBAF complex
132885524 (smarcc2)
GBAF(ncBAF) complex
132885524 (smarcc2)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:116085562..116129436
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| AA seq |
1032 aa
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKSFVDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFLTIEKSLVQNNCLTRPVIYLSSEIEPKLLGKLKDIIKRHQGSVTDDKQASSHVVVP
IPTSLEEEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAVVEDPPSAEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGGTRRKRISAKTLTDEVSAPDERKDKKPANAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYNKSKRGQREEEQEDLTKDLDEPSPVPAAEESLNKTVT
KKDSDSTPVKGGTDGDEQEDEAMETVGKEEDEGSASVKGEPVKGSDLHEDNVTEQTHHII
IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA
CRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVPLQ
PKASQTPSSQPMMSFPDKVKDKPTDLQNFGLRTDMYSKKSGPSKGKNAASATREWTEQET
LLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDGAASLGPLAYQPVPF
SQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAARVS
GRPDPLYGLEGSGIAGTGLEDADKPEESSDESKSSDTQNTEDKRDNSKEGKDGASEEEEK
QGENGKKEEEGGKAGETEREAEKTDSDTGDVEKEKEGKEGSEDGQREGESDGERKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQIQHQHHSNQPSNQPSNAP
PIPHQSAPNASAPPSAPSLSQTASTNTSSEAPPTSASHGSSPNNTQPGAVHDSSTVLTGD
SLHPSGPVTPAQ |
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| NT seq |
3099 nt +upstreamnt +downstreamnt
atggcggtgcggaagaaagacggcgggccgaatgtgaaatatttcgaagcctctgatacc
gtgtctcagttcgacaatgtccgcgtgtggctcgggaagaattataaaaagtatatccag
gcggagcctcccacgaataaatctttgtccagtttggtggttcagctgctacagtttcag
gaagaagttttcggtcgacacgtcagcaacccccctctcaccaaactaccgatgaagagt
tttgtggactttaaggcgggaggagcgctgtgtcacattcttgctgctgcttacaagttc
aagagtgaccaaggatggaggaggtttgatttccagaatccttctagaatggaccgtaat
gtggagatgtttttgaccatagagaagtctctggtacagaataactgcctgactcggcct
gtgatttacctgagctcagagattgaacccaaacttctgggaaaactgaaggatatcatt
aaacgacaccagggctcagtgaccgatgacaaacaggccagttctcatgtggtggttccc
attcccaccagtctggaggaggaggagtgggtccgccctgtgatgaagagagataaacag
atgctgctgcactggggttactggcccgacagttatgatacatggatctcagccagtgaa
gtggaggctgtagtagaagatccacccagtgcagagaaacccagaaaggttcatgcgaag
tggatcctggatctggatcagtataacgagtggatgaatgaggaagactatgaggtgggt
gaaggaggcacgaggaggaaaaggatctcagcgaagactctgacagatgaagtgagcgct
ccggacgagaggaaagataaaaaacccgccaatgccaagaaacgcaaacgctccccctct
ccatccccgactccgccccctcaggagagcaagaagaagaataccaagaaagggcccact
accccctacaataagtcaaagcgaggtcagagggaggaggagcaggaggacttgactaaa
gacctggacgaaccgtcacctgtacctgcagcagaggagtcgctcaataaaacagtgact
aagaaggactcagactcaaccccggtgaagggagggactgatggagacgaacaggaggat
gaggcaatggaaacagtgggaaaggaggaagatgaaggttctgccagtgtgaagggagag
ccggtgaaaggttctgatctgcatgaggataacgtgacagaacagacgcaccacatcatc
attcccagctacgctgcctggttcgactacaacagtgttcatgctattgagcgcagagct
ctgcccgagttcttcaatggaaagaacaagtctaagacccctgagatttatcttgcctac
aggaactttatgatcgatacctatcggctgaacccacaggagtatttgacctctacagct
tgccgtaggaacctggcaggagatgtttgtgccatcatgagggtccatgcatttctggaa
cagtggggtttgattaattatcaggtggattctgagagccgtcccacccccatggggcca
ccgcccacatctcacttccacgtcctggcagacacgccatccagccttgtacccctgcag
ccaaaagcctctcagactccgtcctcacagccgatgatgtcgttcccggacaaagtgaag
gacaaaccaacagatctgcagaactttgggctgaggacagacatgtacagcaagaagagc
ggcccgtctaagggtaaaaacgctgcaagtgctacacgggagtggactgaacaggaaact
ctgctgctgctggagggtctagagatgtacaaggatgactggaacaaggtgtcggagcac
gtgggcagccgcacacaggacgagtgtatccttcacttcctgcgcttgccgattgaggac
ccatacctggaggacggagcagcgtctctggggccgctggcgtaccagccggtgccgttc
agccaggcggggaacccggtcatgagcaccgtggccttcctggcttcagtggtcgacccg
cgagtggcctcggctgcagccaagtctgctctagaggagttctcccggatgaaggaggag
gtaccagcggctctggtggaagctcatgtgcggcgtgtggaggaagcggcccgggtcagc
ggcagaccggacccactgtatggcctggagggcagcggcatcgctggaaccggcctggag
gacgcagataagcctgaggagagcagtgatgagagcaagagcagcgacactcaaaacaca
gaggacaaaagagacaacagcaaggagggtaaagatggagcaagtgaggaggaggagaag
cagggtgaaaatgggaagaaagaagaagaaggaggtaaagcaggagagacagaacgagag
gcagagaagacagactcggacacgggtgatgtagagaaagagaaagaaggaaaagaggga
tcagaggatggacagagggaaggcgagagtgatggagagaggaaagcaaaggtggagaga
gatgttggtgaggggaatctggccactgcagctgcttctgcacttgccgctgctgctgtt
aaagccaagcacctggccgcagtggaggagaggaagatcaagtccctcgtggctttgctg
gtggagactcagatgaagaagctggagatcaaactgaggcactttgaggagctggagacc
atcatggaccgagagagagaggcgttggaatatcagaggcagcagctcctggctgatcgt
caggcgttccacatggagcagttgaagtatgcggagatgagagctcgccagcagcacttc
cagcagatacaacaccagcaccatagcaaccaacccagcaaccagcccagcaatgctccg
cccatcccccaccaatcggctcctaatgccagtgccccaccttctgcacccagcctctcc
cagactgcctccaccaacacctccagtgaagctccacccacctctgcctctcatggctcc
tcccccaacaacacacagcctggagcagtgcatgactctagcaccgtgctaacaggagat
tccctccatccctctggcccagtgacccctgcacagtga |
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