Neoarius graeffei (lesser salmon catfish): 132885846
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Entry
132885846 CDS
T10798
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132885846 (irx2a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
132885846 (irx2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
132885846
NCBI-ProteinID:
XP_060776346
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Position
5:complement(3789121..3797899)
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AA seq
441 aa
AA seq
DB search
MSYPQGYLYQPAPGSLALYPLRSEELELAARCSSSSSSSSSSSSSSSTGSAFTPYPASAA
FTASATGGFASALTYHPDPATGFPSYMASPYDPPPSAMAAPLGFPPYGSAGFPPPPYQLN
DPAYRKNATRDATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK
KENKVTWGARAKSEDEDEEEGARAERKDEEEEEDDKHADNGDASAEDEGISLHVDSLTDH
SAESDGEKVLCRIDDFSCKSAPEAKEKHSEIDLTSGHEGLSPKPMTSSPLTGVEAPLLDA
HRDKNKTCADVQSQNPKPKLWSLAEIATSDSKQPLQSQNCPSGGGIWTSSQSGSAPSASI
LARPIYYTSPFYGNYANYGNFGQGILRYGSIHKHAPEMTMLKANHANHIQTEQHFKALSA
EAKKVDSGDMCTLGPQSYLSS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttatctgtaccagcccgctccgggctctctggctctctacccg
ctcaggagtgaagagctcgagctggccgcgcgctgctcctcttcctcgtcgtcttcctcc
tcctcatcctcctcctcctccacgggttccgccttcactccgtatcccgcatccgcagct
ttcaccgcctccgccaccggcggcttcgccagcgcgctcacttaccacccggacccggcc
accggcttcccctcctacatggcctctccctatgacccccctccctcggccatggcggct
ccgctcggtttcccgccctacggcagcgcgggtttcccgcctcccccgtaccagctcaac
gaccccgcgtaccggaagaacgccacacgcgacgccacgagcacgctgaaggcctggctg
aacgagcaccggaagaacccgtaccccaccaagggcgagaagatcatgctggccatcatc
accaagatgacgctcacgcaggtgtccacatggttcgccaacgccagacggagactcaag
aaggagaacaaggtgacgtggggcgcgcgagccaagagcgaggacgaggacgaggaggaa
ggagcgcgcgccgagcggaaagacgaggaggaagaggaggacgacaagcacgcggacaac
ggagacgcttccgccgaggatgagggtatcagcctccacgtggactctctgacggaccac
tcggccgagtcggatggagagaaagtcctctgcaggatcgacgacttctcctgcaaatct
gctcccgaagcaaaagagaaacactctgagatcgacctgacctcgggtcacgagggtctg
tcgcccaaacccatgacttcttcgcctctgaccggcgtggaggcaccgctcttggacgca
catcgcgacaaaaacaagacctgcgctgacgtccagagccaaaatcccaagcccaagctc
tggtcgttggctgaaatcgccacttcagactccaaacaaccactccagagtcagaactgc
ccctcggggggcgggatttggacctccagccaatcaggctcagctccctcggcgtccatc
ttggccaggccgatttattacacgtcccctttttacggcaattatgccaattacgggaac
tttggccaagggatcctgcgctacggctcgattcataaacacgctcctgagatgacgatg
ctaaaggctaatcatgctaatcacatccagacggagcagcacttcaaggccttgagtgcg
gaggccaaaaaagtagactccggtgacatgtgcacactcggacctcagtcttacctctcg
agctaa
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