Neoarius graeffei (lesser salmon catfish): 132886442
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Entry
132886442 CDS
T10798
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132886442 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132886442 (prpf31)
Spliceosome [BR:
ngra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
132886442 (prpf31)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
132886442
NCBI-ProteinID:
XP_060777070
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Position
5:complement(6838760..6861515)
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AA seq
510 aa
AA seq
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MSLADELLADLEEAGEEGEDGLYPGGEEDQFDGEIVNREGHGGLEVIPEEMETDYSTTEC
VTSIAKLRNSKSFAEIMDKIAQYVENPRKTTDVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFVRDKYSKRFPELESLVPNTLDYIRTVKELGNNLDKCKNNETLQQILTNATIMVV
SVTASTTQGALLAEDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKLMGIAGGLTNLSKMPACNLMLLGAQKRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARQVSAKCTLAARVDSFHESADGKVGYELKEEIERKFDKWQEPPPVKQVKPLPAPL
DAPRTKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNDATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKEGGAKA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcagatgaactcttggctgatttggaggaagctggggaggaaggagaggat
ggactgtatccaggtggagaagaagaccagtttgatggagaaattgtgaacagagaagga
catggaggtctggaggtcattccagaggagatggagacggactacagcactacagagtgt
gtgacttctatagcaaaactgcgcaacagcaaatcatttgctgagatcatggataagatt
gcgcagtacgtcgagaatccacgcaaaactacagacgtttcaggtccggtggaggccgat
cccgagtatcgtctcatcgtcgctgcgaataacctcacggtggagatcgataatgagctg
aatattattcataaatttgtgcgtgataaatactcaaagagattcccggagctggagtcg
ctggtgccaaacacgctggattacatcaggactgtcaaggagctggggaacaacctggac
aagtgtaagaacaatgaaacgctgcagcagattctgaccaatgccaccatcatggtggtc
agtgttaccgcttccaccacacagggtgcattactggcagaggatgagcttcagcgactg
gaggaggcttgtgacatggcactcgagctcaaccaatcgaaacacaggatctacgaatat
gtcgagtcgaggatgtccttcatcgcaccgaatctgtccatcatcgtcggagcctcgacg
gctgccaagctcatgggaatcgctggtggactgacgaacctgtcaaagatgccggcgtgt
aacttgatgctgttgggagcacagaaaagaacgctgtctggcttcagcagcacgtcactg
ctgcctcacacaggctacatctaccactgcgacgtcgttcagtccctcccaccagatctg
aggagaaaagcagcacgtcaggtctcggccaagtgcacgctcgcagcccgtgtagacagt
tttcacgagagtgcagatggcaaggtcggttatgaactgaaggaggagattgagcgtaaa
tttgataagtggcaggagccgccgcccgtcaaacaggtgaagcccctccctgccccgctc
gatgctccaaggacaaaaagaggaggcaggaggtaccggaagatgaaggagcggttggga
ctcacggagatcagaaaacacgccaacagaatgacgttcgctgagattgaagacgacgcc
tatcaggaggatctgggcttcagcttggggcagctgggtaaatcaggcagcggcagggtg
agacaggcgcaggttaacgatgcaacgaaagctcgcatctccaagtccctgcagcggacg
ttgcagaaacagagcatgacgtacggaggcaagtccaccgtcagagaccggtcttcaggg
acgagctccagtgtggcattcactccgttacagggtttggagatcgtcaatccgcaggct
gcagagaagaaggtggccgaagccaaccagaaatatttctccaacatggcagagttcctc
aaggtcaagaaagagggaggagccaaagcgtga
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