Neoarius graeffei (lesser salmon catfish): 132886469
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Entry
132886469 CDS
T10798
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132886469 (cpdp)
Enzymes [BR:
ngra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
132886469 (cpdp)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
132886469 (cpdp)
Prokaryotic type
132886469 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Acetyltransf_8
Motif
Other DBs
NCBI-GeneID:
132886469
NCBI-ProteinID:
XP_060777127
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Position
1:complement(4199764..4223636)
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AA seq
515 aa
AA seq
DB search
MFRVKEVKRFSVMMSEKKMSLKRKGELRKGPEKRGGGVGGAGWLQEKVLEIRRNSAECKF
NPKRLRFLSDAQRVRQGCGAVLYWMVRDQRVQDNWALVYAQQLAREENLPLLVCFCLVPR
YLESTYRQYAFMLRGLQEVAKECTSLDIQFHLLSGEPELTLPGFVKHWDIGAVVTDFNPL
RLPRQWTERVKNELPSDIAFIQVDAHNVVPCWEASNKLEYAARTIRGKITKLLPEFLTEF
PPVDAHPHPSTKTAKKVDWEEVMSSLEVDRSVGEVLWAQPGTAGGVATLESFIDQRLRLF
ATERNNPNASALSQLSPWIHSGQLSAQRVLLEVQRWGKRSAESVSSFTEELLVRRELSDN
FCFYNDNYDNINGAYDWAKKTLQDHAKDARPYLYTREQLENADTHDQLWNAAQRQLVLEG
KMHGFMRMYWAKKILEWTASPEEAVNISIYLNDRYSLDGCDPSGYVGCMWSICGIHDQGW
SERPVFGKVRYMNYAGCKRKFDVGQFERRYAGKKA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtttagggttaaagaagtgaaaaggttttcagtgatgatgagcgagaagaaaatgagc
ctgaagcggaaaggagagctgaggaaaggcccggagaagagaggaggaggagttggagga
gcgggctggctgcaggagaaagtgctggagatccggagaaactctgctgagtgtaaattc
aacccaaagcgtctccggtttctgtctgacgcccagagagtgagacagggctgcggggcc
gtgctgtactggatggtccgggatcagcgagtgcaggataactgggcgctggtttacgct
cagcagctcgctcgggaagagaatttgcctctacttgtgtgtttctgcctcgtgccacgt
tatttagagtcaacgtatcgccagtacgccttcatgctcaggggactgcaggaagtggcc
aaggagtgtacaagtctggacattcagttccacctcctgagcggcgaacccgagctgacg
ctacccggttttgtgaaacactgggacattggcgccgtcgtgactgattttaaccctctc
agacttccacggcagtggactgaacgtgttaaaaatgagcttccatccgacattgccttc
atccaggtcgatgcccataacgtggtgccatgctgggaggcatcgaataaactggagtac
gcagcgagaaccatccgagggaaaatcaccaaactcctcccagagttcctcacagagttt
cctccagtggacgcacaccctcacccgtccaccaaaacggccaagaaggtggattgggag
gaagtgatgtcatccctggaggtagaccgcagtgttggggaggttttgtgggcgcagccg
ggaacagcgggaggcgtcgccacgcttgagtcgtttatagaccagcggctgcgtcttttt
gccaccgagaggaacaacccgaacgcctctgcgctcagccagctctcaccgtggatccac
tcaggtcagttatcagctcagcgtgtgctgttggaggtgcagcgttgggggaaacgctct
gccgagtccgtgtcctccttcaccgaggagctgttggtgcgcagagagctgtccgataac
ttctgcttctacaacgacaactacgacaacatcaacggtgcgtatgactgggcaaagaag
acgctgcaggatcatgctaaagacgcccggccttacctgtacacacgagagcaactggag
aacgcagacacgcatgaccagctatggaacgctgcacagaggcagctggtgttggagggg
aagatgcacgggttcatgcgcatgtactgggctaagaagatcctggagtggacggcttca
cccgaggaggccgtgaacatctccatctacctcaacgatcgctactcgctggacggctgc
gacccgagcggatacgtgggctgtatgtggtccatctgtgggattcatgatcagggctgg
tccgagaggcccgttttcggtaaagtgcgctacatgaactatgcaggctgcaagcgcaag
ttcgatgtgggccagttcgagaggaggtacgctgggaagaaggcttga
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