Neoarius graeffei (lesser salmon catfish): 132886471
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Entry
132886471 CDS
T10798
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Pattern recognition receptors [BR:
ngra04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
132886471 (nlrc3)
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Gene cluster
GFIT
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NCBI-GeneID:
132886471
NCBI-ProteinID:
XP_060777128
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Position
5:8716110..8765571
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AA seq
1145 aa
AA seq
DB search
MNTYIMYSGMERNSQIPWQDDCYMVLKSTPKSGTRKKMEDAGWLRKNQKSLQRFITDQLL
VDVVNQMRKLDELSAEGVGIIKEAGSLEDKVHALIELLFRGDPQGTALQTYLQNLHPDEY
NLITLHDSVVQQHKDSLLQQVREDREILSHQAPDQTPGPALLLVDGVSDLQQREHDLVQV
SVNRGVGPLHGRPLGLDKLFAPLTRVSTAPRVTLTVGVAGSGKTRLVHKFIRHWSSGKIF
PELSLAIPIACWELSSLDRLSLERLLRLTVPYDNVDVILNSRVCKVLLIFDGLEEFRSPL
DFSEAPAISDPRREIPVSDLITNIIRGNLLPGASLWLLSRPGVGAKVPAGLVDRVTEVPP
FLHAQIQDCITNAHLPENSCTQFQQSIQSDSQTQTSEDKSCQAWAHLRSQKSLLILCSVP
CICRIVTTTLSHLVGMDLEEMHFPRTLTEVYALYCWPHLSSTDPSSGSIRKPLGTLGRLA
FYSLLRQRHTFIETELRTYGVDIPPPPGSLGHRILQREQSWSSESVSWRFVHTSVQEFLG
ALFYYVSSRRGMFDLFSESSVSWPRIGFQNHYRAALQKTSTSTNGKLDLFMRFLSGLLSS
AAGALLGGALGVSREEQVTHRTMAMTLLQNAVTGLRGEAVSMRSVSTVACLAELQQGEWI
RSVEEDLTGCRLQGKLKGGVCAVLAYLLQVSESCANETHLSNCLDSASLKQLLPQLLYCS
KLRMENNKFKDDAMELLGSLLSAKDCHIQSLSMADSSISSKGIKPLSRALLVNRTLTALD
LHGNNIGTKGAKTLAEALKMNQVIVSVNLQSNQIEDEGARALAEVLQSNRKLTTLNVQKN
SIGPDGVKRIAEALTKNQILQDLNVSGNHLGDMGALALAQALAVNHTLQTLSLQSNSVSD
KGMKALTQALRFNKGLAKLNLRENSIGIEGARAIARALKENHTLRELDLTANLLHDEGVK
AIAEAVKVNRALISLHLQWNFLKATAAKALAQSLQDNKFIQLLDLQENALGDDGVISLAG
ALKANSSLMVLYLQGVSAGEAGAVALAEALTVNQSLHTLDLRGNVIGMGGAKALSSALKT
NRSLRSLNLQENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIRADAPE
CVVDI
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtacattatgtacagtgggatggagaggaactcacaaattccttggcaggac
gactgctacatggttcttaaatccacaccaaaatcaggaactcgcaagaagatggaggat
gctggttggttgcgtaagaatcagaaatcattgcagcgtttcatcactgaccagttacta
gtagacgtagtcaaccagatgaggaagttggacgagctgagtgcagaaggcgtggggatt
atcaaggaggcaggatctttggaggacaaagtgcatgcattgattgagctgctgttcaga
ggtgatccacagggcaccgccctccagacatacctgcagaacttgcatccagatgagtac
aacctcataactctgcacgactctgttgttcagcaacataaagacagcctcctccagcaa
gtcagagaggaccgtgagattctttcccaccaagcacccgatcagacccctggccctgcc
ttattactggtcgatggtgtgtctgacctgcaacagagagagcatgatctcgttcaagtg
tcggtcaacagaggtgttggacctttacacggtcgtccgctgggactagataaactcttc
gctccactgacgagggttagcactgcccctcgcgtcacgctgacagttggcgtagcaggc
agtgggaaaacccgattggtccacaaattcatacgtcactggagttcagggaagatattc
ccagagttgagcttggcaattcctattgcctgttgggaactgagcagtcttgatcgcttg
tcacttgagaggttgcttcgcttgaccgttccatatgataatgttgatgtgattttgaac
agtcgtgtctgtaaagtgctgttgatctttgatggattggaagaattccgttcccctctg
gacttctcagaagccccagccatctcggatccacgtcgggaaattccagtatccgatctc
atcacaaacatcatcaggggcaacctgttaccaggagcatcactgtggcttttgtcaagg
cctggagttggggcaaaagtacctgcaggattggtggatcgtgtgacggaagtcccacct
tttttacatgctcaaattcaagattgcatcacaaatgcacacttgccagagaactcttgc
acacaattccagcagtccattcagtcggattctcaaacacaaacatcagaggacaagtct
tgccaagcgtgggctcacctgagatcccagaaatccttgcttattctttgttcagtgcct
tgcatttgtcgtattgttacaaccaccttgtcccaccttgtagggatggacttggaggag
atgcatttcccacggactctgacggaggtttatgccctctactgttggccacatctctct
tctacagatccatccagcggaagcatccggaaaccgctgggcactcttggacgattggcc
ttttacagtctgcttcgccaacgtcatacatttatcgagactgaattacgaacttatggt
gttgacatcccaccaccaccaggctctctgggacatcggatccttcaacgtgagcagagc
tggtcctctgaatcagtgtcatggcggtttgtacacacttctgtgcaggagtttcttggc
gcactcttctactacgtgtcctcacggcgtggaatgtttgatctgttctccgagagcagc
gtttcatggccacgaattggcttccaaaaccattatcgtgctgcactccagaaaactagc
acctcaaccaatggcaagcttgacctcttcatgcgcttcctctctggcctattgtcctca
gccgccggagctctgctgggcggggctttgggagtaagccgagaagagcaggtgacccat
cgcacaatggccatgactctgcttcaaaatgcagtgacaggattacgaggcgaggcggtg
agcatgcgaagtgtatctacggtcgcttgcctggcagaactacagcagggggagtggata
cgctctgtggaggaggatctgactggctgcagactacaggggaagcttaagggtggggtt
tgtgcagtgctggcatatctgctgcaagtttcagagtcgtgtgccaatgagacacacctc
tcaaactgcctggactctgcctctcttaaacaacttctccctcagctcctgtactgcagc
aagttgaggatggaaaataataaatttaaggatgatgcaatggagctcctgggaagtttg
ctaagtgccaaagactgtcatattcaatcactaagtatggcagatagctcgattagcagt
aaggggatcaagccgctgagtcgagctcttcttgtcaatcggaccctcaccgcactggat
ctccatggcaacaacattggcaccaaaggagcaaagaccttggccgaggcgctgaagatg
aaccaggttatcgtgtccgtcaatcttcaaagcaatcagatcgaagacgagggagctcga
gcactggccgaggttttgcagtcaaacaggaaactcaccacactaaatgttcaaaagaac
agcataggcccagatggggtgaagagaattgcagaagcactcacaaaaaatcagatttta
caagacctcaatgtatctggcaatcacttgggagatatgggtgcactagcactggctcaa
gcactcgcagtcaaccatacactccaaactctgagcctccagagtaactctgtgagtgat
aagggtatgaaggcgttgactcaggccctgcgcttcaacaaaggcctcgctaaactcaac
ctcagggagaactccattggcattgaaggtgctcgagctatcgcccgggctttaaaagag
aaccacacactgagggaacttgatctcacagctaatcttctacatgatgaaggtgtgaaa
gccatcgcagaagcagtgaaggtcaacagagctctgatttctttgcatctccaatggaac
ttcttgaaggccactgcagctaaagctctcgctcagtccctacaggacaacaagttcatc
cagctcctggatctccaggaaaatgctctgggtgacgatggggtcatctcgctggcaggc
gcactaaaggctaactcatctctcatggtgctctaccttcagggtgtatcggcaggtgaa
gcaggtgctgtagctctggctgaagctctgacggtcaaccaaagcctccacacacttgat
ctccgtggtaacgtcattggcatgggcggggccaaggcgctctccagcgcgctgaagacc
aatcggagtttgagaagtttgaatcttcaggagaactctttgggaatggatggagccatc
ttcatcgccactgcgctcagaggaaatcatcagcttacttatataaatcttcagggtaac
ggaatcggcgagtcgggagcgaaggtcgtttcggatgcaatacgagctgatgcgccagag
tgcgtggtggacatctga
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