Neoarius graeffei (lesser salmon catfish): 132886489
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Entry
132886489 CDS
T10798
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132886489 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngra01002
]
132886489 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ngra00536
]
132886489 (shha)
Peptidases and inhibitors [BR:
ngra01002
]
Cysteine peptidases
Family C46: hedgehog family
132886489 (shha)
Glycosaminoglycan binding proteins [BR:
ngra00536
]
Heparan sulfate / Heparin
Morphogens
132886489 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DUF7764
Vint
Hom_end_hint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
132886489
NCBI-ProteinID:
XP_060777166
LinkDB
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Position
1:complement(5256584..5282455)
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AA seq
401 aa
AA seq
DB search
MRALWVSLCLSVLVLLPVRACGPGRGYGRRKHPKKLTPLAYKQFIPNVAEKTLGASGRYE
GKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGVKLR
VTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAHIHC
SVKAENSVAAKSGGCFPSSARVRLKDGAIKEVKDLKVGDEVLAADESGNLIYSEFIMFAD
HDSARRRAFRVIETRNPPMKIALTAAHLLFILQNSTLTETFASDITPGQEVMILDEGGRR
LRAVTVDRIYEEERDGSFAPLTSHGTIMVDDVLASCYAAVQNQKLAHLAFTPLRLVHKVA
PFLFSGSANDGVHWYSEFLYRIGTRILGEAAFHPLSMEDKS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgctgtgggtgagtctgtgcctgtcggtgctggtgctgctgccggtgcgcgcg
tgcggtccgggccgcggttacggccgccggaaacacccgaaaaagctgaccccgctcgcg
tacaagcagttcatcccgaacgtggcggagaaaacgctgggcgcgagcgggcgctatgag
ggcaagatcacgcgcaactcggagcgcttcaaagagctcacgcccaactacaacccggac
atcatcttcaaggacgaggagaacaccggggccgaccgactcatgacccagagatgcaaa
gacaagctgaactcgctggcgatctcggtgatgaaccagtggccgggtgtgaaactgcgc
gtgaccgaaggatgggacgaagacggccaccatttcgaagagtcgcttcactacgaaggc
cgagccgtggacatcaccacgtccgaccgagacaagagcaaatacggcacgctgtcgcgc
ttagcagtggaggccggcttcgactgggtgtactacgagtccaaagctcacatccactgc
tccgttaaagcagagaactctgtggcagcgaagtcaggaggctgttttcccagctcggcc
cgcgttcgcctgaaagatggcgcaataaaggaggtgaaggacctgaaagtgggagacgag
gttttggcagcggacgaatccgggaatctcatctacagcgagtttatcatgtttgcagac
cacgacagcgccagaagacgagcgttccgcgtcatcgagaccagaaacccgccgatgaag
atcgcgctgacagccgcacacctgctcttcatcctccagaactccacactgaccgagaca
ttcgccagcgacatcacaccgggacaggaagtgatgatactggatgaaggaggacgccgt
cttcgtgcggtcacggtggatcggatttacgaagaagaacgcgacggatccttcgcgccg
ctcacaagtcacggcaccatcatggtggacgacgtcctcgcttcctgttacgccgctgta
cagaaccagaagctggcgcacttagcgttcacacccctccgccttgtccacaaggtggca
ccgtttttgttcagcggatcagcaaatgacggcgttcactggtactctgaatttctgtac
cgaattgggacacggattttaggcgaagccgcttttcatccactcagcatggaggacaag
agctga
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integrated database retrieval system
