Neoarius graeffei (lesser salmon catfish): 132886580
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Entry
132886580 CDS
T10798
Symbol
fen1
Name
(RefSeq) flap endonuclease 1 isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03030
DNA replication
ngra03410
Base excision repair
ngra03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132886580 (fen1)
03410 Base excision repair
132886580 (fen1)
03450 Non-homologous end-joining
132886580 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngra03032
]
132886580 (fen1)
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132886580 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132886580 (fen1)
DNA replication proteins [BR:
ngra03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
132886580 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
132886580 (fen1)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
132886580 (fen1)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132886580 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
132886580
NCBI-ProteinID:
XP_060777404
LinkDB
All DBs
Position
5:complement(21061553..21175123)
Genome browser
AA seq
385 aa
AA seq
DB search
MSDYGSLPSAREKDVLTSRLSRCADQRGILFLGRKIAIDASMCIYQFLIAVRQDGNVLQN
EDGETTSHLMGMFYRTIRMLDSGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQ
ETGEQENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVYAT
ATEDMDGLTFGTSILLRHLTASEAKKLPIQEFHFSRILQEMSLSHQQFIDLCILLGCDYC
GTIKGIGPKRAIDLIKQHGSIEEILDNIDQSKHPAPENWLYKEARALFLEPEVVDCSTAE
LKWNEPDEDGLVQFMCDEKQFNEERIRNGCKKIMKSRQGSTQGRLDTFFTVTGSISSKRK
EPEAKGSAKKKQKTSATPGKFKKGK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattacgggagtcttcctagtgcgcgcgaaaaagacgtgctcacctcgcgtttg
agtaggtgtgcagaccagcgtgggatattatttttagggcgcaagattgccatagatgcc
tccatgtgcatttaccagtttctgatcgctgttagacaagacggcaatgttttacagaat
gaagatggtgagacaacaagccacctcatgggcatgttctacagaaccatccgaatgctg
gacagtggcatcaagcctgtatatgtgtttgatgggaagccccctcagctcaagtctgga
gagttagagaagagaggggagaggagagcagaagctgaaaagctgctcgcacaagcacaa
gaaacaggtgaacaggagaacatcgacaagttcagtaaacgtcttgtaaaagtcaccaag
cagcataatgatgagtgtaaaaaactcctcacgttaatgggagtgccttatattgaggct
ccatgtgaggctgaggccagctgtgcagctctggtaaaggcaggaaaagtgtacgccaca
gcaactgaagatatggatggattaacttttggaacaagcatcctgttgagacacttaacc
gcgagtgaagctaagaaacttccaatccaagagtttcatttcagccgcattctgcaggag
atgagcttatcacatcagcagttcatcgatttatgtatcctactgggctgtgactactgt
ggtacaatcaaaggaattggacccaagagagcaattgacctcatcaaacaacatggttcg
attgaagaaatccttgacaacattgatcagtctaaacaccctgccccagaaaactggctt
tataaggaggctcgagccctgtttctggagcctgaggtggtggactgttccactgcggag
ctcaagtggaatgagcctgatgaggatggactggttcagtttatgtgcgatgagaaacag
tttaatgaggagcgtatccgtaatggctgtaagaaaataatgaagagtagacaggggagc
actcaagggagactggacacgttctttactgtcacaggatccatctcttctaaacgaaag
gagcctgaagcaaaaggctcagccaagaagaaacagaagacgagtgcaacaccaggcaaa
ttcaagaagggcaaatga
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integrated database retrieval system
