Neoarius graeffei (lesser salmon catfish): 132886639
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Entry
132886639 CDS
T10798
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132886639 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ngra01007
]
132886639 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132886639 (vars1)
Enzymes [BR:
ngra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
132886639 (vars1)
Amino acid related enzymes [BR:
ngra01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132886639 (vars1)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132886639 (vars1)
Prokaryotic type
132886639 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
Arc1p_N_like
GST_C_2
DUF4629
tRNA-synt_1e
GST_C_3
Motif
Other DBs
NCBI-GeneID:
132886639
NCBI-ProteinID:
XP_060777540
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All DBs
Position
5:complement(32278416..32391913)
Genome browser
AA seq
1271 aa
AA seq
DB search
MASLHVSSHPDDFRSLLVLIAAEYCPLHPHVCAKESPNNVVHSRPALVLGGPEGTTLCGA
SAVSWYLASSGKKVGSDAKQQSQVWQWLSFTENELIPVACAVAFPLLGVTGIDKKLQQSS
HGELLRVLKILDQALEPRTFLVGESVSLADIAVVTAVLLPFKYVLEPSNRKSLVNVSRWF
DTCVNQPQFLKVLGKISLCEKMVPVTPKPDPASAAANNSTPNGTAAAGEGPPKTEAQLKK
EAKKREKLEKFQQKKEIEEKKKQLQAQSEKKAKPEKKELGVITYNIPTPAGEKKDVLSPL
PDSYSPQYVEAAWYSWWEKQGFFKPEYGRKSVSEVNPHGIFMMCIPPPNVTGSLHLGHAL
TNAIQDCLTRWHRMKGETTLWNPGCDHAGIATQVVVEKKLMRERGMTRHDLGRENFIEEV
WKWKHEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHEEGVIYRSKRLVN
WSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFSYKIEGSDDEVVVATTRI
ETMLGDTAVAVHPDDPRYQHLKGKVAVHPFCDRKLPIVFDNFVDMSFGTGAVKITPAHDH
NDYEVGERHKLPFINILDENGFLINVPPPFLGMKRFEARKAVLQALNDIGQFKEIKDNPM
VVPVCSRSKDIVEPLLKPQWYVDCAGMGQQAADAVRTGELKIIPEHHLKTWFNWMDNIRD
WCISRQLWWGHRIPAYFITVNDPSVKAGEDVDGHYWVSGRSEEEAREKAAKRFNVTADKI
SLRQDEDVLDTWFSSGIFPFSIFGWPNENEDLSVFYPGSLLETGHDILFFWVARMVMMGL
KLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLADSNLDPLE
IEKAKQGQKSDYPSGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNAVK
FALRTLGEGFVPWEKAQLCGTESVSDRWILSRLSAAVALCGNGFQAYDFPAITTAVYNFW
LYELCDVYLESVKPVLSRTDPEGQKQTDICRQTLYTCLDVGLRLLSPIMPFVTEELFQRL
PRRQPQDSPPSISVTPYPESSEFCWHSEELDHQMEFVMTVVRTIRSLRADYNLTKTRADC
YLQCIDSVTASLVEEYSLQIQTLSYSQAIHPVSGSESAIPEGCAVAIASDKCTVHLLLKG
LIDVEKEVAKLSTKKGELEKQMEKMEEKMKKSDYTKKVPAKVQEQDAEKLRQSQTELQKV
MDAIENFRRMM
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctgcatgtgtcctctcaccctgatgacttcaggagtttgctggtcctgatt
gctgctgaatactgtcccctccacccacatgtgtgtgctaaggagtctcctaataatgtt
gtccactctcgccctgccctggtcctgggaggacccgagggaacgacgctgtgtggtgcc
agtgctgtcagttggtacctggcatcctcaggcaagaaggttggcagtgatgccaagcag
cagagccaggtgtggcagtggctgagcttcactgagaatgagctgattcctgtggcctgt
gctgtggccttccctctgttaggggtgacgggtattgataaaaagcttcagcagagttcc
catggagagctgttgcgtgttttgaagattctagatcaggctttagagccacggacgttc
ctggttggagagagtgtgtctctggctgacatagctgttgtgacggctgtgctgctgcct
ttcaaatatgtgctggagccttcaaacaggaagtcgctggtgaatgtgagcagatggttt
gatacttgtgtgaaccagcctcagttcctgaaggtgttgggtaaaatctcgctctgtgag
aaaatggtgcctgtgacgccaaaacctgatcctgcttccgctgctgcgaacaacagtacg
cccaacggcacagctgccgccggtgaaggtccacccaagacagaagcccagcttaaaaaa
gaggccaaaaagcgtgaaaagctagagaagttccagcagaagaaggagatagaggagaag
aagaagcagcttcaggctcagtctgagaaaaaagccaaaccggaaaagaaggaattgggt
gtgatcacgtacaacatccccaccccagctggagagaaaaaagatgtgctgagccctctg
ccggattcatacagtcctcagtacgtggaggcagcctggtactcgtggtgggagaaacag
ggtttcttcaagcctgaatatgggcggaagagcgtcagtgaggtgaaccctcatggtatt
tttatgatgtgcatccctcctcctaatgtgaccggctctcttcatttgggccacgcctta
accaatgccattcaggactgcctgaccagatggcacaggatgaaaggtgagaccacgctg
tggaacccgggctgtgatcacgctggcattgcgactcaggtggtggtggagaagaaactg
atgagggagagagggatgaccagacatgaccttggccgagagaacttcatcgaagaggtc
tggaagtggaaacatgaaaagggtgatcggatctaccaccagctgaagaaactcggctct
tccctggactgggaccgagcatgtttcactatggatcctaaactgtcctacgctgttcag
gaggcttttattcgtatgcatgaggagggggtgatctacaggagcaagagactcgtcaac
tggtcctgcaccctcaactccgccatctccgatatagaggtggataagaaggagctgacg
ggcagaacactgcttcctgtgccaggctataaggagaaggtggagtttggagtgctggtg
tccttctcttataagattgaggggtcagatgacgaggtggttgtagccaccacacgtatc
gagaccatgttgggtgatacagctgtggctgtgcatcctgatgatcccagatatcagcac
ctgaaaggaaaggtagcagttcatccgttctgcgaccgcaagctgcccatcgtgttcgac
aacttcgtggacatgagcttcggaacaggcgcggtgaagatcacgcctgctcacgatcac
aacgactacgaagtgggtgagagacacaaactgccttttatcaacatcctggatgagaat
ggcttcctcatcaatgttcctcctccattcctgggcatgaaacgcttcgaggcgaggaaa
gctgtgctccaggccctcaacgacataggccagtttaaggagatcaaggataaccctatg
gtggtgccagtgtgcagccgctctaaggacatcgtggagcctctgctgaagccgcagtgg
tatgttgactgcgcagggatggggcagcaggcagccgacgcagtcaggaccggggagctg
aagatcatcccagagcaccacctcaaaacctggtttaactggatggataatatcagggat
tggtgtatctctcgtcagttgtggtggggtcacaggatcccggcatatttcatcacagtg
aatgatccctcagtgaaagcaggagaggacgtcgatggtcattactgggtcagcggccgg
tcagaggaagaagcccgagagaaagcagcgaagcgcttcaatgtcactgcagacaaaatc
tcccttcgtcaagatgaggatgttttggatacttggttttcttctggaatctttcccttt
tccatctttggatggccaaatgaaaacgaggacctgagtgtattctatccaggctctctg
ctggagacgggccatgacatcctgttcttctgggtggctcgtatggtcatgatggggctc
aaactcacaggcaaacttccttttaaagaggtgtatctgcatgctgtggtgagggatgcc
catggcaggaagatgagcaagtctctggggaacgtaatcgaccctctggatgtcatcact
ggaatctcactcgagggtctccatgctcagctggcggacagcaatctggacccactggag
attgagaaggctaaacagggacagaaatctgattaccccagtggaattccagagtgtgga
accgatgcccttcggtttgccctgtgtgcctacaccagccaaggaagggacattaacctg
gacgtgaacaggatcctgggctacaggcatttctgcaacaagctgtggaacgctgtgaag
tttgccctgaggacgctgggggagggtttcgtgccgtgggagaaagctcagctgtgcggc
actgagagtgtgtctgataggtggattttgtcccgcctcagtgctgccgtggcgctctgc
ggaaatgggttccaggcctacgatttcccagcaatcaccacggccgtctataacttctgg
ctctatgaactgtgtgatgtttatctggaaagtgtgaagcctgttttgagcagaaccgac
ccagaaggccagaaacaaacagatatttgcaggcagactctctatacctgtctggatgtc
gggctccgcctcctgtctcccatcatgcctttcgtcaccgaggaactcttccaacggtta
ccacggaggcagccccaggacagcccccccagtatctcagtcaccccttacccagaaagc
tcagagttttgctggcacagtgaggaacttgaccaccagatggagttcgtgatgactgtc
gtcagaaccattcgatcactcagggccgactacaacctgaccaagacccgtgcagactgt
tatctgcagtgtatagactctgttacagcgtctctggtggaggaatacagtctgcagatc
cagactctgtcctactctcaggccatccacccagtcagcgggagcgaaagcgccatccca
gaaggctgtgcggtggccatcgcttcagacaaatgcaccgtccatctcctgctgaagggc
ttgattgatgtcgagaaggaggtggccaaactgtcgacaaagaagggcgagctggagaag
cagatggagaaaatggaggagaaaatgaagaagagtgactatacaaagaaagttccagcg
aaggttcaggagcaggatgcagagaagttgagacagagtcagaccgagctgcagaaagtg
atggacgctatagagaacttcagaaggatgatgtaa
DBGET
integrated database retrieval system
