Neoarius graeffei (lesser salmon catfish): 132886716
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Entry
132886716 CDS
T10798
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00900
Terpenoid backbone biosynthesis
ngra01100
Metabolic pathways
Module
ngra_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
132886716 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ngra01006
]
132886716 (fdps)
Enzymes [BR:
ngra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
132886716 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
132886716 (fdps)
Prenyltransferases [BR:
ngra01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
132886716 (fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
132886716
NCBI-ProteinID:
XP_060777690
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All DBs
Position
5:40657608..40681174
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AA seq
354 aa
AA seq
DB search
MGESSCSKAGHLSDPQLFDRYFEKLLCELTEQDFTDPVLADALNRLREVLQYNATGGKRN
RGLSVIGSLRELIPPSKLSPEEVERALLVGWCIELLQAFFLVADDIMDASQTRRGQPCWY
KKEGIGLDAINDAFLLEGSIYRLLRRHCRGQPYYIHLLELFTETSFQTELGQALDLMTAP
PNKIDLNRFTMVRYKAIVKYKTAFYSFYLPVAAAMYMAGIESEVEHSNAKHILLEMGEFF
QIQDDYLDCYGDPAVTGKIGTDIQDNKCSWLVVAALKVMTPEQRVELEGCYGQSDAESVE
RVKALYDTLEMPLRYHKYEEESYLRLQNLIQQHAQTLPHAVFLNFAKKIYKRNK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaagtagctgcagtaaagctggccacttgtcagacccacagctttttgacaga
tactttgagaagctgctgtgtgagttgacggagcaggatttcacagacccggtacttgct
gatgctctcaacaggctcagagaggtactgcagtacaatgccacaggaggcaagaggaac
cgtggcttgtctgtgattggttcactgcgggagttgatcccaccctccaagctgtcaccc
gaagaagtggagcgtgccttgttggtcggctggtgcattgaattgctgcaagccttcttc
ttggtagcagatgatataatggatgcatcacaaacacggagaggtcagccatgctggtat
aagaaggaaggcattggcctggatgcgattaatgatgcttttctcctggaggggtccatc
taccgccttctgcgtagacattgcagaggacagccctactacatccatttattggagctt
tttactgagacatctttccagacagagctgggccaagccctcgatctgatgactgctcca
ccaaacaagattgacttaaaccgtttcaccatggttaggtataaagccatagtgaagtac
aagactgcattctactctttttatcttccagtggctgcagccatgtacatggcaggaatt
gagagtgaagtggaacacagcaatgctaaacacatcttacttgaaatgggggagttcttt
cagatacaggatgattacttggattgctatggtgaccctgcagtaacaggcaagattggc
actgacatccaggacaataagtgcagctggcttgtggtggcggcactgaaggtgatgacc
cctgagcagagggtggagctagagggatgctatggtcagagtgatgctgaaagtgtagag
cgagtgaaggcactgtacgacacgctggaaatgcctctccgataccacaagtatgaggaa
gagagctacctgcgactccaaaacctcatccagcaacatgctcaaactcttccccatgct
gtttttctcaactttgccaagaaaatttataagaggaataaatga
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