Neoarius graeffei (lesser salmon catfish): 132886721
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Entry
132886721 CDS
T10798
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132886721 (rnf115a)
04121 Ubiquitin system [BR:
ngra04121
]
132886721 (rnf115a)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132886721 (rnf115a)
Membrane trafficking [BR:
ngra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132886721 (rnf115a)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132886721 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
zf-C3HC4_3
C1_2
HypA
zf-RING_6
DUF7560
Pcf11_C
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
132886721
NCBI-ProteinID:
XP_060777705
LinkDB
All DBs
Position
5:complement(40899146..40952716)
Genome browser
AA seq
310 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVRPKLPEYICPRCDSGFIEEVTEDSSLLDSSTNGLDDTAS
QFAELWQLLFAEWPFTADLDRPESEPRVPGGAGGLGLGGGPFGGSVPGGLSGNLSSPLGG
GEHWGPSRPSRLHTQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGAPGSPPLSWTGM
LHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSLPTVIVSQEQADSSLECPV
CKEDYTVGEPVRQLPCNHFFHSDCIVPWLELHDTCPVCRKSLSGEDSGNQPPSEPSSVNT
EPRTQERWSY
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcagttcctccgcatcggtttttctgtcactgttgtaaaggcgaa
gtgagacccaaactcccggagtatatctgccccagatgtgactctggatttattgaagag
gtaacagaagattccagtcttttggacagtagtacgaatgggcttgatgacacagcttca
cagtttgcagagctctggcagcttctgtttgcggagtggccatttacagcggacttggac
agacctgagtcagagccacgggttccaggaggtgctggaggactaggtctaggaggaggg
ccatttggtggctctgtccctggaggcctcagcgggaacctcagtagccctttaggagga
ggagagcactggggccccagtcgtccctctcgcctgcacactcagaggagatatagatcc
agaggaagcagtcggccggatcgctcccctgctgtagagggaatagtacaacagtttctt
gctggcctttttgccaattcaggtgctccaggttcgcctccactgtcatggacaggcatg
ctgcactcaaaccctggtgactatgcctgggggcaggggggtctggatgcagtcattaca
cagttactgggtcagtttgagaacacaggtcctcctcctgcagagaaagagaaaatctcc
tcccttcccacggtcattgtttctcaggaacaggctgacagcagtttggagtgtccggtg
tgtaaggaagactacacagtcggggagccagtcaggcagctgccctgcaaccacttcttc
cacagtgactgcattgtgccctggctagaactgcatgacacatgtccggtatgcaggaag
agtttgagtggagaggacagtggcaatcagccaccctcagagccctcctccgtaaacacc
gagcctcgcacacaggagagatggtcctactga
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integrated database retrieval system
