Neoarius graeffei (lesser salmon catfish): 132886723
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Entry
132886723 CDS
T10798
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
ngra04810
Regulation of actin cytoskeleton
ngra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132886723 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132886723 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132886723 (itga10)
04810 Regulation of actin cytoskeleton
132886723 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132886723 (itga10)
Cell adhesion molecules [BR:
ngra04515
]
Integrins
Integrin alpha subunits
132886723 (itga10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_3
FG-GAP_3
vWA_SIBA-E
ITGAX-like_Ig_3
EIF3I
Motif
Other DBs
NCBI-GeneID:
132886723
NCBI-ProteinID:
XP_060777708
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Position
5:complement(41035931..41144132)
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AA seq
1170 aa
AA seq
DB search
MEIREYLLLLNISVLLKGLCQCFNIDVNQPHIFSGSEDALFGFSVLQHEVGGEKLMLVGA
PWDGPPNNRKGDIYKCMVGEEQNSNCSKVYLADSAFQNVSRNLKNSHLGMTLTPDEPNGF
LACAPLWSQECGTSLFSTGICASVDNDLETKETIAPTAQRCTTYMDIVIVLDGSNSIYPW
SEVQNFLKNILSKFHISPEQMQVGILQYGEIAVHEWSLKDYQTTEEVVEAAKNINRQEGR
ETRTAYAIQMACTEAFSAERGARDGATKVMIVVTDGESHDGDELADALVECEQRNITRYA
IAVLGHYIRRQQDPETFINEIKSIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GFNQSTFLMEMSQIGFSTHILNDGILFGMVGAYDWEGGILKEGVDGRVMPPREAFEEEFP
VKLKNHAAYLGYTVSSVTVGDWRRLYVAGAPRFKHKGKVILFDLSLDGDVNITQAIEGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYVYCLDGNGFAPNGTLHSQ
QKPQDARFGYAMTVAPDLNHDGFSDLLVGAPLEDDHQGALYIYHGDEFYIKPHYKQRISA
SSLSAGLQYFGRSLSALLDMDGDKLLDLAVGAHGSAVLLRSRSIVQINMSLSFQPHSINV
IQKNCHRGSRDSACLTATACFRAVSRSPGSHGTTFDLHVGAMLDDRKLSARALFDANSQR
QILTGVRVEVGKSTCHTLPFHVFDTADYIRPISFSLNFKINDTDSGPVLDEGWPTTLKQS
IPFYKDCGEDDVCVTDLVLKAHMDIKGTRQQPYVIHSPRRRLAVEVQLQNQLENAYNTSL
ILYYSKNLHFSSLSIREDGQFKIECTGLSSNIHSCNVSYPVFRSGSKVNFMLEFEFSCTS
LINKVQMKLVAASDSVEQEKTLFDNTVQLQSIVQYKPDLFITSDSNLNRYEVHPTRTVSE
GTGPEFYTNFRIQNLGCYAVSNLELSVSLPSVAAADRTFASVVDAFSHNTSGVNCSIKSE
LAQLKASQRDVRPLHPDDMKKNEFLNCSSSWCVEVVCQIQQLLKGQTAVIRITRRVHDNF
FRQAKFKAVMIVASYHLSAQETNLITLGNAGLWRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALIIFILWKLGFFTRKQRKDDEDHED
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggagattcgagagtacctgctgttactaaacatctccgttctactaaaaggactgtgc
caatgttttaacattgacgtaaaccagccccacatcttcagtggatcagaggatgctcta
tttgggttctctgtgctacagcacgaagttggtggagagaaactgatgttggttggtgct
ccatgggatggtccacccaataacagaaagggagacatttacaaatgcatggtgggagag
gaacagaattccaactgctcaaaagtgtatctagctgacagtgcatttcagaatgtgtca
cggaatctgaaaaactctcacttgggcatgacgctcaccccagatgaacccaatggattt
ttggcctgtgccccactttggtctcaggagtgtggtacatctctcttcagcacggggatc
tgtgcgtctgtcgacaatgacctggaaaccaaagagaccatcgctcccacagcacagaga
tgcactacctacatggacatagtaatagttctggatggttctaacagtatctacccttgg
tctgaggtgcagaacttcctcaagaacatcctcagcaagttccacattagcccggagcag
atgcaggtgggtatcttgcagtacggcgagattgcagttcatgagtggtcccttaaggac
tatcagacgacagaggaagtggtggaagctgccaagaacatcaatcgacaggaagggcga
gagactcgcaccgcatacgccatacagatggcctgtacagaggcattcagtgccgaaaga
ggagctagagatggagccactaaggtgatgattgtggtgacagatggagagtcacatgat
ggcgacgagcttgctgatgcactggtcgagtgcgagcagcgtaacatcaccagatacgcc
attgctgttttaggccactacattcgcaggcagcaggacccagagacctttattaatgag
atcaaatccattgccagtgaccctgatgagaaatactttttcaatgtaacagatgaagct
gcactgaatgacattgtagatgcacttggagatcgaatctttagtttggaagggacattg
ggatttaatcaaagtaccttcctcatggagatgtcacaaattgggttctcaacacatatt
ttaaatgatgggatcttgtttggcatggtaggagcttatgattgggaaggaggaatttta
aaagagggtgttgatggaagagtcatgccccctcgagaagcctttgaggaagaatttcct
gtgaagctaaagaatcatgcagcatacctaggttatactgtgtcctcggtgacagtaggt
gattggaggaggctgtatgtggctggggcacccaggttcaaacacaaaggaaaggtaatt
ctgtttgacctgagtctagatggagatgtcaacatcacacaggccattgaaggagagcag
attggctcctattttggcagcgaggtgtgtgtggtggatgtagatcaggacggtataaca
gatatcctcctgattgctgcccccatgttcctgggagcagggaacaaagagacaggcaaa
gtctatgtctactgtctagatgggaatggttttgctccgaatgggaccctacattctcag
cagaaaccccaggatgctcggtttggttatgccatgactgtggctccagacctcaaccat
gatggcttttctgaccttctagtgggagctccactggaagatgatcaccagggtgcgctt
tacatctaccatggcgatgaattctatataaaaccccattacaagcagcgtatctctgcc
tcctctctctctgcaggcctgcagtattttggccgcagtctgagcgcattgttggatatg
gatggagacaaactgctggatctggcggtcggagctcacggcagtgccgtcctcctcagg
tctcgcagcatagtgcagatcaacatgagtctgtcctttcagccacactccatcaacgtc
atacagaagaactgccacaggggcagccgtgattcagcatgccttactgccaccgcctgc
ttccgggctgtgtcccgttccccaggctcacatggcacaacctttgatctgcacgtgggg
gctatgttggatgacagaaagttgtctgcacgtgctttgtttgatgctaactctcagagg
cagatactgacaggggtcagagttgaagtaggaaagtctacgtgccacacgctgcccttc
catgtatttgacacagcagactacatccgaccaatcagtttctccctgaacttcaaaatc
aatgacacggatagtggcccagtgctcgatgaaggctggccaaccacacttaagcagtct
attccattttataaagactgtggagaagatgatgtgtgtgttacagacctggttttgaaa
gcccacatggacatcaaaggaacaaggcagcagccttacgtgatccacagtcctcgaaga
cgcctggctgtggaggttcagctccagaaccagttagagaatgcctataacaccagcctc
attctttattactccaaaaacctgcacttcagcagcctaagtatacgggaggatggccag
tttaagatcgagtgtactggactgagttccaacattcactcttgcaatgtcagctatcca
gtctttcgctctgggtccaaggtgaactttatgttggagtttgaatttagttgcacatct
cttatcaataaagttcaaatgaagctagttgcagcaagtgacagtgtagagcaagagaag
actctgttcgacaacacagttcagttacagagtatagttcagtacaagcctgatctcttc
atcaccagtgattccaatctaaaccgctatgaggtccatcccaccaggaccgtatcagag
gggacaggacctgaattctacacaaatttcaggatacagaacctaggctgttatgcggtc
agcaatctggagctgagtgtcagtttaccctccgtagctgctgcagacagaactttcgct
tctgtagtggatgctttctctcacaatacctctggtgtaaactgcagtattaagagtgaa
ttagcccagctaaaagcttctcagagagacgtgcgtccacttcatcctgatgacatgaag
aaaaatgaatttttaaactgcagctcttcttggtgtgtagaggttgtgtgtcaaatccaa
caactgctgaagggacaaacagccgttattcgcatcactagaagggtgcatgataacttc
ttcagacaggcgaagttcaaagctgtgatgatagtcgcctcctaccacctgtctgctcag
gagactaatctgatcacactgggtaatgctggcctttggagggagaccgtgttggaggta
ctgaagggtcgttcaattccaatttctctatggatcctcatcggcagtatcattggaggc
ctactgctgcttgcacttatcattttcatcctttggaagttgggctttttcacaaggaaa
cagagaaaagatgacgaggaccacgaggactga
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