Neoarius graeffei (lesser salmon catfish): 132886776
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Entry
132886776 CDS
T10798
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132886776
Membrane trafficking [BR:
ngra04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
132886776
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Glycoprotein_G
Motif
Other DBs
NCBI-GeneID:
132886776
NCBI-ProteinID:
XP_060777816
LinkDB
All DBs
Position
5:47121665..47241064
Genome browser
AA seq
1487 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAGDSAPPDEECQQRGGRGMEPVSDLTVIARGLGEDVPEGFTC
IEKTLGGHPAELSAGLINNPHMFLCYRRSHDKPPIVELGVLYDGKEVVKQGWHVIETTPY
SRCASLSSGGPATHKTFLMYRRAPDSQALNTLGVTDISLLMPSKGEVAPHTFCKVDKNLN
TGMWGPALYLCYKRAVAKANALVYEAGLISRYPEEDLESFALPDSVPVFCLPMGVTVESW
PLNTKYQLPVFSTFVLTTASGDKVYGAAIQFYEAYPREALSERQRVRLGLVSVVDRRPIT
NRTVQVKKSVCVLSHWPFFTVFQKFLTFIYRYSISGPHVLPIEKHISSFMHNVPFPSPQR
PRILVQLSPYDNLLLCQPVSSPLPLSGASFVKLLQNLGPENACTLLLAVLTEHKLLLHSL
RPDVLTSVSEALVSMTFPLRWPCPYIPLCPLRCADVLCAPMPFIVGVHSSYFDLYDPPSD
VVCVDLDTNTIFQSEDKKPLSWKSLPRKHGKILLSSLIHLHKTLEKICTPGHEEATLEFL
LTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRSYLLPITQAPSDRTTDCSSLFNLQGF
LKSRDRTQQKFYSHLTKTQMFTQFIEECSFVSDRHACLEFFDECVQKVDVEKPEEVRLID
LDETHSGEHTVFIMPPEEPQELDGSECPAPYSYETFPVLHPELFDRPQDQLRTAAKGSAP
SSPAPRRTKQEIKLAQKCAQKYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESTKVRALH
TAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYGYY
NKAVLESKWPSTNQGGRLRWAKLRNVLLAVAQFRQPIKHRQKGGSVSSKQGNSTCNLHPH
STLVRQTSWSGLSESSSHESLTGPITKSNSLSSMRPDKSKMARTTMLQNKSTDDPASRKP
PISPRDMATPSPVPSDDCVRVRRSDVCLSTFYKECAEPDTDCRCQPTERDGRPAEQQETL
NRKAVDENYNNVLSPNRGLAGKLQQLLTPTRHRNSSRRAASVDERRPATNGPSRKSSEQR
QSRKSQVAETLLKARERLTNATSESSLSVGSDIDLTDPPNSGFSLRKSWDSSQEGVGLEV
SMSSCTLCRSCNSLVYDEEIMAGWTSDDSNLNSTCPFCSASFVPLLNAEICDLGPVSSSQ
YRSNWNMEDEVESAVRPTSGHDGFLHLYNGVNEHDSSSETSTYSENSSNTLSSSLGGTPQ
VTVAYLSPLVLRKELESLLENEGEGVLSQVQLLDSHSILFWNLVWYFTRLGLPSNLLQLV
RASPLASQISQSSESTSVRVRLLWDTLTPDTDHWPPLYVLWRIHSGVPMRNCAWRRHNHP
FTLSFLEEVLRCVGMNEVHKAITFFLDTIAKQPGAPRIQRSLYREFLFLTLAAMSKDHVA
AFDKRYKAAYARLSSSLGREELRRKRAQPPSPKAVDCRRCFLVPLDC
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggagaaatgtcctcagttggtggattattttgtggtggcggggctggcgggc
gactctgctccaccagacgaggaatgtcagcagagaggcggccgtggtatggagcccgtc
agcgacctgactgtgatcgcccgtggccttggagaagacgtgcctgagggcttcacgtgc
attgagaagacattggggggccacccagctgagctcagtgccggcctcatcaacaaccca
cacatgttcctctgctaccgacgcagccatgacaaaccacccattgtggagctcggtgtg
ctgtatgatgggaaagaggtggtgaagcagggttggcatgtgatcgagacaacgccatac
agccgctgtgccagtctgagctcaggaggccctgccacccataagacgttcctcatgtac
aggcgcgcccctgactcgcaggccctgaacacactcggggtgactgatatctcattactc
atgcccagcaagggagaagtggcaccacacaccttctgcaaagtggacaagaatctgaat
actggcatgtggggcccggcgctgtacttatgctataagcgggctgtcgcgaaagccaac
gccctggtgtatgaggcagggctgattagccgctaccctgaggaggatcttgagtccttt
gcactgccagactcagttcctgtcttctgtcttcccatgggtgtcactgtagagagttgg
ccactcaataccaaataccaactccctgtcttctccacctttgtcctcaccaccgcatct
ggagataaggtgtacggagctgcgatccagttctacgaggcgtacccacgggaggctctg
tctgaaaggcagcgggtgcggcttgggctggtcagtgttgtggaccgccgacctatcacc
aaccgcacagtgcaggtgaaaaagagcgtgtgtgtgctctctcactggccgtttttcacc
gtcttccagaagtttctcaccttcatctatcgctactccatctctggacctcatgtgctg
cccattgagaagcatatctccagtttcatgcacaacgtgcccttcccttcaccacagcgg
ccgcgcattctggtacagctgtctccgtatgacaacctcctgctgtgccagccagtgtcc
tcacccttaccattgagtggtgccagctttgtgaaacttctgcagaatctggggccagag
aacgcatgtaccctgctgttggctgttctcactgagcacaagctgctgttacattccctc
cggccagatgtgctgacctcagtcagtgaagccctggtgtcgatgacgtttccgttgcgt
tggccctgtccgtacatcccgctgtgcccgctccggtgtgcagatgtgctgtgtgcccca
atgcctttcatcgtgggcgttcactccagctattttgacctgtacgaccctccttcagat
gtggtgtgtgtggaccttgacaccaacaccattttccaatcagaagacaagaaacccttg
tcatggaaatctttacccaggaaacatggcaaaatcttgctcagctcactcatccacctg
cacaaaactttggagaaaatctgtacccctggtcacgaagaggcgaccctggaattcttg
ctgacagattacgatctgatctacgggcgtcaaaagcagctggagctggagatccaggag
gccttcctgcgctttatgagctgcctcctaagaggttatcgctcctacctcctgcccatc
acccaggctccctctgacagaaccactgactgcagctctcttttcaatttgcagggcttt
ctaaagtctcgagatcggacgcagcagaagttttattcccatctcaccaagactcagatg
ttcacacagtttatagaagaatgctccttcgtcagtgacagacacgcatgccttgaattc
tttgatgagtgtgttcagaaggtggatgtggagaagcctgaggaggtgaggctgatcgat
cttgatgagactcacagtggagagcacacagtgtttataatgccaccagaggagcctcaa
gaacttgatggctctgaatgccctgcgccctacagctatgagacgtttcctgttctacat
cctgagttgtttgaccggcctcaggatcagctccgtaccgcagcgaagggaagtgccccc
agtagtcccgcccctcgccgtaccaaacaggagatcaaactggctcagaaatgtgcacag
aagtactctgcagtaccagacatgtggtccaagtgtctgctgggccactgttatggtctg
tggttcatctacctgcccacatttgttcgggctgagagcaccaaggtgcgggcactgcac
actgcctatgaggtcctcaagcacatggagacacggaaggtggtgctgcccgatgaggtg
tgctacaggatcctaatgcagctgtgtgggcagtacgggcagcctgtgcttgctgtcagg
gtcctgctggagatgaagaaagcaggaatcactccaaacaccatcacatatgggtactac
aataaggctgtgctggagagtaagtggccatccaccaatcagggaggtcgccttcgatgg
gccaagcttcgcaacgttcttttggccgtggcacagtttaggcaaccaatcaaacacagg
cagaagggcggctctgttagctcaaagcaaggtaactccacctgtaatcttcacccacac
tccactcttgtacgccagaccagctggagtggtttgagtgaaagttcaagccatgaatca
ctgactggtcccatcactaagagcaacagtctaagcagcatgcgacctgacaaatcaaag
atggctaggacaacaatgctgcaaaacaaaagcactgatgaccccgcctcccgcaaacct
cccattagtccgcgggatatggctacaccctcgccagttccctctgatgactgtgtaaga
gtgcgacggagtgatgtctgcttgtccaccttttacaaggagtgtgcagagccagataca
gactgcaggtgccagccgactgagagagatggcagacctgcagaacagcaggaaaccctg
aatcgcaaggcagtagacgagaactacaataacgtgttgtccccgaatcgtggactggca
ggtaaacttcagcagcttctcacacccacgcgtcaccggaactcatcacgccgtgcagcc
agtgtggatgaacggcggcctgctactaacggcccgtcacgcaaatcatctgaacagagg
cagtctcgcaaatcgcaggtggccgagacgctgctgaaagccagagagcggctcaccaat
gccacttcagagagctcattgtctgtaggtagtgacattgacctgacagaccctccaaat
tctggtttttcactcaggaagtcatgggattcttcacaggaaggggtggggcttgaggtg
tcgatgtcgagctgtactctttgccggagctgtaactcgttggtgtatgatgaggagatc
atggcaggctggacatccgatgactccaatcttaactccacctgcccattttgctcagca
tcctttgtaccactgcttaatgcagagatctgtgaccttgggcctgtcagcagcagtcag
tatcgcagtaactggaacatggaggatgaggtagagagtgcagtgaggcccacgagtggt
cacgatggttttctccatctttataatggtgtgaatgagcatgactccagttcagagacc
agcacatactccgagaacagcagtaatactctaagctcatcattgggcggcacccctcaa
gtaacagtggcgtacctgagccctctggtcttgcgtaaggaactggaaagtctactggaa
aacgagggagagggtgttctttctcaggtccagttactagacagccactcgatcctcttc
tggaatctggtgtggtacttcactcgccttggcctccccagcaatctgctccagctggtg
cgggcctcgccgctggcttcacagatttcacagagctctgagagtacttcagtaagggtg
aggttattgtgggacactttgacgcctgatacggatcactggcctcctctctatgtgctc
tggagaatacacagcggagtgccgatgcgtaactgcgcatggcgcagacacaaccacccc
ttcacgctgagctttctagaggaagtcctgcgctgtgtcggtatgaatgaggtacacaag
gccatcacgttctttctggacaccatcgcaaagcagccaggcgctccccggatacagagg
agtttgtacagagaatttctttttcttactttggctgctatgagcaaagatcacgttgct
gcttttgacaagaggtacaaggccgcctatgccaggctgagtagctccctgggccgagag
gagctgaggaggaaaagagctcagccacccagccccaaagccgtggactgcaggcgctgt
ttcctagtgcccctggactgctga
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