Neoarius graeffei (lesser salmon catfish): 132886861
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Entry
132886861 CDS
T10798
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132886861 (ptbp2a)
Spliceosome [BR:
ngra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132886861 (ptbp2a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
132886861
NCBI-ProteinID:
XP_060778013
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All DBs
Position
5:53182656..53243832
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AA seq
510 aa
AA seq
DB search
MDGISDVAVGVKRGSDELLSSSMYNSPNSGMSSISDGTSNGSDSKKLRVEERVGEAPPSR
VLHIRKLPSEVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAITMVNYYSAVTP
HVRNVPVFIQYSNHKELKTETNQSGTPTSGSGDGTLSTPSSPVLRIIIDNMFYPVTLDVL
QQIFSKFGTVMKIITFTKNNQFQALLQYNDAASAQQAKVALDGQNIYNACCTLRIDYSKL
VNLNVKYNNDKSRDYTRPELPAGDGQPAVDPSVAAAFGKDSNSLLGKIPGALSPLSAAAA
AAAAAGRVALSGHSGSGVLLVSNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQ
MADMNQAQLAMSHLNGQKMYSKIIRVTLSKHQTVQLPRDGLDDQGLTKDFTNSPLHRFKK
PGSKNFQNIFPPSATLHLSNIPQDITEDDLRVLFTNSGGTVKAFKFFQDRKMALIQLSTV
EESIQCLIDLHNYNMGNNHHLRVSFSKSTI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgatgttgcagttggtgtaaagagggggtcagatgagttgttgtcc
agcagcatgtacaacagtcccaactcggggatgagcagtatcagtgatggcacatccaat
ggaagtgacagcaaaaaattgagagttgaagaaagggtgggagaggctcctccatcacgc
gttcttcatatcaggaaactacccagtgaagtctcagagacggagatcattgccttagga
ttgccctttggaaaggtcactaatatccttaccttgaaaggcaaaaaccaggcattcctg
gagcttagcacggaagaagcagctattaccatggtaaactactattcagctgttacgccg
catgttcgaaatgttcccgtcttcattcagtattcaaatcacaaagagctcaagaccgag
acaaaccagtctggaacacccacatcaggatccggtgacggaaccctctcaacacccagc
agtccagtcttgaggatcatcatagacaacatgttctaccctgtcactctcgatgtgttg
cagcagatcttctcaaagtttggcacagttatgaaaatcatcacattcacaaagaacaat
cagtttcaggccttgctacaatacaatgatgcagcgagtgctcaacaagccaaagtggca
ctcgatggtcagaacatatacaatgcttgctgtacactccgtatagactactccaagctt
gtcaacctgaatgtgaagtacaataatgataagagcagggactacactagaccagagctg
cctgcgggtgatgggcagcctgctgtggacccctctgtggcagcggcctttggcaaggac
tcgaactctctgcttggtaagatcccaggtgcgctgagccctttgagtgcggcggcggca
gcagcagcggcagcaggtcgagtggctctgtctggacactcgggtagcggcgtgctcctg
gttagcaatctcaacgatgagatggttacgccccaaagtctgtttaccctcttcggggtg
tatggtgatgtgcagcgtgtgaagatcctctacaacaaaaaagatagtgcgctgatacag
atggcagatatgaatcaggcccaacttgcaatgagtcatcttaatggtcagaagatgtat
tcaaaaatcatccgtgtgaccttgtccaagcatcagacggttcagttacccagggatggc
ttggatgatcaaggcctcaccaaggatttcaccaattctcctctacatcgtttcaaaaag
cctggctccaaaaacttccagaacatcttccctccctctgccaccctgcatttgtcaaac
atcccgcaagatataactgaagacgacctcagagtactgttcactaactccggaggcact
gtgaaagctttcaaatttttccaagatcgcaaaatggctctaattcagttatccacagtt
gaagaatccattcagtgcttgattgacttgcacaactacaacatgggtaacaatcaccat
ctgagggtctccttctccaaatcaacaatttaa
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