Neoarius graeffei (lesser salmon catfish): 132887016
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Entry
132887016 CDS
T10798
Symbol
limd1a
Name
(RefSeq) Wilms tumor protein 1-interacting protein isoform X1
KO
K16682
LIM domain-containing protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132887016 (limd1a)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132887016 (limd1a)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132887016 (limd1a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
132887016 (limd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
132887016
NCBI-ProteinID:
XP_060778295
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Position
5:complement(69587342..69639804)
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AA seq
573 aa
AA seq
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MDKYEDLGLEASKFIEDLNMYEASKDGLFRMKRDAGNNPDFEETRRVFASKMTKIHMQKH
QEEMARNSLGERLNGGHVKVADGTFYTKDRPPISNSRHEAASKPPILSGPSTCYEGQKHH
PASPHDARVFSYGSNHDNKDLSRSYHNPSVEPGNSCPQTIPLPSSPSGTLVSKNNPQSQA
SSSSLSPNFGLSSSGTNLNRGATSPVHQTSPCQTLTPAGKPDWFPPSVTGAHGEPDCHHK
SSPYVSPTHHAEPIVPQKPYGDPRLNGVPQSTGTCSAVQLSPLAQSQPEAHQPKGQVQCH
TRGHSSSTVPDNLLNPAEPARSDAHSPPQALKLPCHTLHIQPESGPSTAEIKLEALTERL
EKEMDAQPKADYFGSCVKCSKAVYGASQACQAMGSLYHDSCFTCSACSRKLRGKAFYYVS
GKVFCEEDFLYSGFQQSADKCSVCGHLIMDMILQALGKSYHPGCFRCVICNESLDGVPFT
VDTENKIYCVKDYHRVLAPKCAACSQPILPSEGSDETIRVVSMDKDYHVECYHCEDCMME
LNDEEGHRCYPLDGHLLCHTCHLKHIESSCPSV
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaagatttggggctcgaagcgagcaagttcatcgaagacctgaacatg
tacgaggcgtccaaggacggactgttccgcatgaagagggacgcaggaaataacccggac
tttgaggaaaccaggagagtgttcgcctccaaaatgaccaaaattcacatgcagaagcat
caagaagagatggcgagaaacagcctgggagaaaggctaaacggtgggcatgtcaaagta
gcagatggcacgttttacaccaaagacagacctcctattagtaactccagacatgaagct
gcatctaagccacctattctgtcaggaccgagcacatgttatgaaggacagaagcatcat
ccagccagcccacatgatgccagggtttttagctatggaagcaatcatgataataaagac
ctgtcacgctcataccataatccatctgtagaacctggaaactcttgtcctcaaactata
cctcttcctagcagtccttctggcactttggtatctaagaacaatcctcaatcccaggca
tcatcatcatcactatcacccaactttggcttgagttcaagtggaacgaacctgaaccgt
ggagcaacttctcctgtccatcagacttcaccatgccaaactttaacacccgctgggaag
cctgattggttcccaccatcagtcacaggtgctcatggagaaccagactgtcaccacaag
tcttctccttatgtgagccctactcatcacgccgaacccatcgtgcctcagaaaccctat
ggagacccacgccttaacggggttcctcaaagcactgggacgtgctccgctgtccagctg
tccccgctagcgcaaagccaaccagaagcgcatcagcctaaaggtcaagtgcagtgtcac
actcgaggtcatagcagttccactgttccagacaacttgctgaaccctgcagagccagct
cggagtgatgcccacagccccccacaggcactcaaactgccatgccacactctccatata
cagcccgagtctgggccatctacagctgaaataaaattagaagctctaactgaacgcctg
gaaaaggagatggatgcccagcctaaggctgactacttcggcagttgtgtgaaatgcagt
aaggccgtgtatggagccagtcaggcgtgccaggccatgggcagcctctaccacgacagc
tgcttcacctgcagtgcgtgcagtcggaagctcagggggaaagcattctactatgtctct
gggaaggtgttttgtgaagaggattttctgtactctggctttcagcagtcagctgacaaa
tgcagtgtatgtggccacctgatcatggacatgatcctgcaggcactgggcaagtcctac
catccaggctgtttccgctgcgtcatctgtaatgagagcctggatggagtgcctttcact
gtggacaccgagaacaagatctactgtgttaaagactaccacagggttcttgctcctaag
tgtgcagcatgcagtcagccaatcctgccttctgaggggtctgatgaaaccattcgagtg
gtatctatggataaggactatcatgtagaatgctaccactgtgaggactgtatgatggag
ctgaatgatgaagaaggacatcgctgttacccactagatggccacctgctgtgccacaca
tgccacctcaaacacattgagtcaagctgcccgtctgtctga
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