Neoarius graeffei (lesser salmon catfish): 132887018
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Entry
132887018 CDS
T10798
Symbol
cdcp1a
Name
(RefSeq) LOW QUALITY PROTEIN: CUB domain-containing protein 1a
KO
K06732
CUB domain-containing protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ngra04090
]
132887018 (cdcp1a)
CD molecules [BR:
ngra04090
]
Proteins
132887018 (cdcp1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDCP1_CUB_6
CUB_CDCP1_2
CUB_CDCP1_1
CUB
DUF6479
DNA_pol_viral_C
TM_ErbB1
TMEM_230_134
TMEM51
DUF3671
DUF3742
TMEM154
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
132887018
NCBI-ProteinID:
XP_060778300
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All DBs
Position
5:69786665..69798814
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AA seq
806 aa
AA seq
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MGLFLFGLFQLSVWIISVSGGPPLTINLYSNSTMHINKSKASQLKCEVCIGTSCHSSLTI
SRSTTVVFSCPRPEDVFVVEIVRNIVCTSTCNGMITTEDYPSLQNFNRTFTWNVTIQGHK
AFCLNFTRAGLRQLQPTEQCQDKHVYTFSTATATLGRFCHQGSIKSMEVLREGSVSLQVP
GKKQLNATSFGVSIGPEITSPAIINAILPEEPSSQEFFSPNFPESFPDDDLITWAFQVPS
KYYSTVHILNYTEPRCDTKDPRMEYQLYGKTFVKKLSEAQLSEHQGSFNLSLQNCNVDTQ
SSSTGLTLHFKISAVQRGSEVRCTMDLKREKGLLIHITKKKPKSDCILKLYSVAQETIII
PSPMVSSVSFIDCKEEDVLITINKTIECQQLSDCPFPESLEVPALDKCIVGVVQEVRWHL
YGPQHSTVELVSSAGSLQQSLPGYTCNNTSVLLTVSENEPQGITVGQFCPQGAIHKMQIS
VANITVSASPAVGKNLRHINKSLLHVSFTKSIQDHYIFTVLPKKDIPVLLATPAWPLGMK
AHTTVSWFVSFPAQLEAHVNFTNVSQLTCKHRPAYIKLQRKQSQDKMYSWQDQNPKDMVV
SESFYLNMSNCLPVKGAFSVVSQVTLYTVKSMLLSIILSVVGVILLLMAIILAVVCIMRK
KKKKQSAPDVSVYNPNSHSFLPGLHGIPQEREDEDYHVYHYIDDHLVYGHLLKDSVEMNE
VGKPAVGVYQDFIRSTEQQPSTEDGGGKEPEVXVYRPFIGLQSAQDVPDTLLSTGENLAC
KDKREADEEISGGNSAQDWETVPNIQ
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggggctgtttctttttggattgtttcagttgtcggtgtggataatctcagtctcagga
ggcccaccacttaccataaatctttacagtaattctacgatgcatataaataagagtaaa
gcttcacagttaaaatgtgaagtttgtattggaacatcatgccattcttctctgacgatc
agtagaagcacgacggtggttttcagctgtccacgaccagaagatgtctttgtggtggag
attgttagaaacattgtatgcaccagtacgtgtaatggtatgatcaccacagaggactac
ccttctcttcaaaactttaaccgcacctttacttggaacgtgacaatccagggccacaag
gctttctgcttgaactttaccagagctggtttaaggcagctccaacctacagagcaatgt
caagacaaacacgtctacacgttttctacagccacagccacacttgggaggttttgccat
cagggcagcatcaaaagcatggaggtgcttcgggaaggcagtgtgtctttgcaggtgcct
ggaaaaaaacagctgaatgcaacaagctttggtgtatcaataggaccagaaataacatca
cctgccattataaatgccatcctgccggaggagccatcatcccaggaattcttttcacca
aacttcccagagagctttcctgatgatgacctaatcacatgggccttccaagttccatcc
aagtactattcaacagtgcatatactgaactacactgagcccaggtgtgatacgaaggat
ccacgaatggagtaccaactatatggcaaaacctttgtgaaaaaactgagtgaggcacag
ctgtctgagcaccagggctccttcaatctttcactgcagaactgtaatgtagacacacaa
tcctcctccaccggtctcaccctgcattttaaaatatctgccgtccagagaggcagcgaa
gtgcgctgtactatggatctgaagagggaaaaggggctactgatacacataacgaaaaag
aaacccaaatcagattgcatcttgaaactgtattcagtagcccaggagacaatcatcatc
ccttcaccaatggtctcatctgtatctttcattgactgcaaagaggaggacgtgctcatc
actataaacaaaactatagaatgtcagcagctgagtgactgcccatttcctgaatctcta
gaggtgcctgcactagataaatgtatcgtgggagtcgtacaagaggtccgatggcaccta
tatgggcctcagcacagcacagtggagctggtgtcttcagcaggcagcctgcagcaatcg
ctgcctggctacacgtgcaacaacacatctgttcttctcactgtgtcagaaaatgagccc
caaggcatcactgttgggcagttttgtcctcagggagctattcacaaaatgcaaatcagt
gttgcaaacattacagtgagcgcttctcccgccgttggcaagaatttaaggcacatcaac
aaatccctcttacatgtttcatttactaaatctatacaagatcactacattttcactgtc
ttgccaaagaaggatataccagtgctcttagcaactccagcatggccgttgggaatgaag
gcacataccactgtctcctggttcgtctcatttcctgcacagctggaggctcatgtgaac
tttaccaatgttagccagctcacatgtaagcatcgaccagcatacattaaattgcaaagg
aagcaatcgcaagataagatgtacagctggcaagatcagaatcctaaggatatggtggtg
tcagaaagtttctacctcaacatgtcaaactgcttgccagtgaaaggagccttcagtgtg
gtcagccaggtcaccctgtacacagttaaaagtatgcttttgagcatcatcttgagtgtt
gtgggcgttattttgctgttgatggcaatcattttagctgtggtctgtattatgaggaaa
aagaagaagaagcagagcgctcctgatgtctccgtctacaatcccaatagtcattctttc
ctgccaggccttcatgggattccccaggaaagagaagatgaagattatcatgtttatcat
tatatagatgaccacctggtatacgggcatcttctgaaagactctgtagaaatgaacgag
gttggaaagccagctgtaggagtttaccaggatttcatcagatccacagaacagcagcca
tccacagaggatggaggaggcaaggagccagaagtangggtttacaggcctttcataggg
cttcagagtgcacaagatgtgcctgatacacttttaagtacaggagaaaatttggcatgt
aaagacaagcgggaagctgatgaggaaatcagtggaggcaactctgctcaggattgggaa
actgtgccaaatatacagtga
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