KEGG   Neoarius graeffei (lesser salmon catfish): 132887226
Entry
132887226         CDS       T10798                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ngra03037]
    132887226 (ift140)
Cilium and associated proteins [BR:ngra03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   132887226 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_WDHD1_1st Beta-prop_WDR19_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WDR55 TPR_GEMI5 TPR_COPA_B WD40 WD40_Prp19 Clathrin TPR_IFT80_172 Beta-prop_CAF1B_HIR1 Beta-prop_EML EIF3I tRNA_int_end_N2 Consortin_N Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Rax2 Beta-prop_TEP1_C FtsK_SpoIIIE_N
Other DBs
NCBI-GeneID: 132887226
NCBI-ProteinID: XP_060778704
LinkDB
Position
5:109131990..109250281
AA seq 1460 aa
MAVYFDHRIDAPDSNGEATLITWHSAQPLLAVGSFNPASGGCVDIYLQQGERVELCHVER
VCAPALLRWHPTKPVLAVGWETGETLLLPHPHGEQTPLPNNTHTTGITLLDWSCSGARLV
TGDQAGVLVVWKLDARGRLNGTHMTKQTYNKPLTNCIFRITPPTEDVAMLAKAAVSGDEE
ALDKFNWKKSGKGGGVWSPGAQEGLLIYVSTADGCVYSVDEHGRSVHLLTVEGRVRKLCY
LERRAVLAVITDSLLLSQFILGPEGAAQELSKVKLSGRGGQNTDIVWTESSLLITASGDH
TIRVWDLERDDNYVLSLDETLGFEKGELLNCVSFCTAKAVLAAGTSRGRVAMWQMVAVTN
QTGDTKTQWRLQTPTELEGNITQLQWGSSLQLLAVCNSSAVLILSEHVMSSHYNQQRAAV
QLSPTQLSLTCFTSNTHLTLRTDTHIRAVQVTKDTVTVWDGRCVTVYEKSGQSLRSTASF
QCDSAALAVHEENIYTVEPNRVQVRTQQGTVKQLLVFTEAEGNPVILSVCGPYLAVGTDA
AHVRVFDLSRREAKPLCNAKNMAELIPDLGALKSVKCNANGSQLSILITQVNGRPAHRVY
LYDVEMDTLSHFDFFTGRPLSSLSQGSEDHQRAQCEETELAGRYPVSQFWDECEPRLFVC
ETVLVNSEYHIANQSQATDKVDVLVVTFFMTPEHGLLLQDSQPRPTGLQGLLALDTPYYY
YTCKPGELDTTSPAPAAVPSSTHMVVRRPLRDFVGLESCEKQTRDAMLNFSFYLTIGDMD
EAFRAIKLIKSEAVWENMARMCVKTRRLDVARVCLGNMGNARAARALREAEKEPELEARV
AMLATQLGMLDEAEALYRSCGRFDLLNKFYQARGDWQKAIETAEGHDRIHLRSTYYSYAQ
HLENTGDKNLGLTYYERSDTHRFEVPRMLMEDIVSLELYINKMKDKCLYKWWGHYLESQS
EMESALRYYDYAQDYLSQVRVHCYLGNIQKASEIANETGNRAASYHVARQYESQDQISQS
VHFYTRAQAYNNAIRLCKENHMDEQLMNLALLSNPEDMMDTAAYYEERGEHMDRAVMLYH
KAGRVSKALELAFSTEQFGALQLIAEELNENSDPAVLTRCSDFFIKHTHYHKAVQLLVAA
KKYHEALQLCLDQNLTITEDLAESMTVSQSSAHLSEEERKDLLEQIADCCMRQGNYHLAT
KKYTQAGKKIKAMRALLKSGDTEKIVFFAGVSRQKEIYVMAGNYLQSLDWRKDPEIMKNI
ISFYTKGRALELLAGFYQACAQVEIDDYQDYEKAYGALTEAYKCLSKAKSRHGEETDERL
TQLTHHLTLIKRFIQARRLYEQDPAAALSECECLLEERDLDPAVRVGDVFGFIIEHHCQH
ASYQKAWVKLEELRRLHPSVNVSVYVSARSLDTLQNAIGVRLNHGDSTHVNTHHRDADNT
RTQSDGEDEEEVEEEENLND
NT seq 4383 nt   +upstreamnt  +downstreamnt
atggctgtttattttgatcatcggattgatgccccggacagtaacggagaggcgactctt
atcacgtggcactctgctcagcccttattggctgttggctcctttaaccccgcctctgga
ggctgtgtagatatttacctgcaacagggcgagcgtgtggagttgtgtcatgtggagcgt
gtgtgtgcgccagcgttattgcggtggcatcccacaaaaccagtgctggctgtgggctgg
gagacgggagaaaccctgctgctcccacacccacacggggagcaaacaccactgcccaac
aacacacacaccaccgggatcacactgctggactggagctgcagcggagccagactggtc
acaggggatcaggcaggggtgctggttgtgtggaagctggatgctcgaggaagattgaac
ggaactcacatgacgaaacagacctacaataaacccttaaccaattgtatcttcagaatc
acaccacccacagaggatgttgcgatgctggcaaaagcagcagtcagtggtgatgaagag
gctctggataaatttaattggaagaaaagtggtaaagggggtggagtttggtctcctggt
gcacaagaaggactcctcatctacgttagcactgctgatgggtgtgtgtacagcgtggac
gagcatggccgtagtgtacacttgttgactgtagagggcagagtgcggaaactgtgttat
ttggagcgcagggccgtacttgctgtgatcacagactccctgctgctctcacagttcatc
ctcggtccagaaggagctgctcaggagctcagcaaggtgaaattgagtggtagaggagga
cagaacacagacatcgtgtggacggagagcagcctgctcatcacagcatcaggagatcat
accatcagggtgtgggatctggagagagatgataactacgtcctgtctctggatgagacc
ctgggctttgagaaaggagagctgctcaactgtgtgtccttttgcactgctaaagcggtc
cttgcagcaggcaccagcagggggcgtgtcgctatgtggcagatggtggcagtaaccaat
cagacaggagacacaaaaactcagtggaggttacagactccgactgaactggagggaaac
attacacagctgcagtggggttccagtctgcagctcttggcagtgtgtaacagcagtgca
gtgttaattctgagtgaacatgtgatgagttctcactacaaccagcagagggcagcagtg
cagctctcacccacacagctcagcctgacctgcttcacctcgaacacacacctcacactg
cgcacggacacacacatcagagcagtgcaggtcaccaaggacacagtgactgtatgggac
gggaggtgtgtaacagtctatgagaaatcaggacagtccttacgtagcacagcttctttt
cagtgtgactctgctgctctggcggttcatgaagagaatatttatactgtagagccgaac
cgagtgcaagttcgcacgcagcagggcaccgtaaagcagttgctggtgtttacagaggct
gaggggaaccctgtcatcctgagtgtgtgtggaccgtacctggctgttgggactgatgcc
gctcatgtcagagtcttcgatctctcacgcagggaggccaagccactgtgtaatgccaag
aacatggctgaactcattcctgacctgggagctctgaaatcagtcaagtgcaatgctaat
ggcagccaactcagcatcctgatcacacaggtaaatgggcgtcctgctcacagagtgtat
ttgtatgatgtggagatggacacactctctcactttgacttcttcactggacgacctctc
agcagcctctcacaggggtctgaagaccaccagagagctcagtgtgaggagacggagctt
gcaggtcgttatccagtctctcaattctgggatgagtgtgagccacgcctctttgtgtgt
gaaactgttctggtgaactctgagtaccacatcgccaaccagtcacaggccacagacaag
gtggatgtgttggtggtgacgttcttcatgactccggagcatggcctccttctgcaggac
tctcagcccagaccaactggtctacagggattactggcactggatacaccatactactac
tacacctgcaagcctggagagcttgatacgacatccccggcccctgctgcagttccttcc
tcaacccacatggtggtgcggcgacctctgcgtgactttgttggtttggagagctgtgag
aagcagaccagagacgccatgctgaacttcagcttctacctcaccatcggggacatggac
gaggccttcagagccatcaaactcatcaagagcgaggctgtttgggagaacatggctcgt
atgtgtgtgaagactcggcgtctggatgtggcgcgtgtgtgtctgggcaacatgggtaac
gcccgagcagctcgtgcgctcagagaggcggagaaagagccagagctggaggcacgagtt
gcgatgctcgcaacgcaactgggcatgctggatgaagctgaggctctgtatcgttcctgc
gggaggttcgacctgttgaataagttttatcaggctcgtggtgattggcagaaagccatc
gaaacggctgagggtcacgaccgcatccacctgcgcagcacatactacagctacgcgcaa
cacctggagaacacgggcgacaagaacctgggccttacctattacgagcggtctgataca
caccggttcgaggttcctcgcatgctgatggaggacatcgtgtctctggagctctacatc
aacaagatgaaggacaagtgcttgtataagtggtggggtcattatctggagagccaatca
gagatggagtctgcactgcgttactatgactacgctcaggattacctgtctcaagtgcgt
gtgcactgctacctggggaacatccaaaaggcgagcgagattgccaacgagacaggcaac
cgagcggcgtcctatcacgtggcacggcagtacgagagtcaagatcagatcagccaatcg
gtgcacttctacacacgcgctcaggcgtacaacaacgccatccgactgtgtaaggagaac
cacatggacgagcagctgatgaacctggcgctactcagcaacccggaggacatgatggac
acggctgcctactatgaggagaggggagagcacatggaccgagctgtcatgctatatcac
aaggcaggtcgcgtgtctaaagctctggaattggcgttcagtacagagcagtttggagcg
ttgcagctgattgcagaggaactgaatgagaacagcgacccggccgtgctcacacgctgc
tccgacttcttcatcaaacacacacactaccacaaagctgtgcagttgcttgtggctgcc
aagaagtatcatgaggcactgcagttgtgtttggaccagaacctgaccatcacagaggat
ctggctgagagcatgactgtgtcacaaagctccgcccacctctcagaggaggagcgtaag
gatctgctggagcaaatagcagactgctgcatgcgccagggcaactatcacttagcaacc
aagaaatacacacaagctgggaaaaagatcaaggcgatgcgagcgctgctgaagtcaggt
gatacagagaagattgtgttcttcgctggcgtgtctcggcagaaagagatctacgtgatg
gcagggaattacctgcagtctctggactggaggaaagatccagaaatcatgaaaaacatc
atcagtttctacactaaaggacgtgcactggagctgcttgcaggcttctaccaggcctgt
gcacaggtagagatagatgattatcaggactatgagaaggcgtatggtgcccttactgaa
gcttataagtgtctatccaaagccaagagtcgccatggagaagaaacagacgagcgactc
acacaactcacacaccacctcacactcatcaagagattcatacaggcacgcaggctgtat
gagcaggaccctgcagcagctctatcagagtgtgaatgcttgttagaggagcgtgacctg
gaccctgcagtgagagtaggagatgtctttggcttcatcattgagcatcactgtcaacac
gccagctaccagaaggcatgggtaaagctggaggagctgagacgtttgcatccatcggtg
aatgtgagtgtatacgtcagtgctcgcagtctggacactctgcagaatgccatcggagta
agactcaaccatggagactctacacatgtgaacacacaccaccgagatgcagacaacaca
cgcacacagagtgatggcgaggatgaggaggaagtggaggaggaagagaacctcaatgac
tga

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